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BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    177601 8efy:K (3.16) BS04 MG 3.6.4.12 GO:0000400 ... Q5SL87 N/A
    177602 8eg3:A (2.04) BS01 CA 3.1.6.2 N/A P08842 36427797
    177603 8eg7:J (3.2) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177604 8eg7:J (3.2) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177605 8eg8:J (3.3) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177606 8eg8:J (3.3) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177607 8egb:J (3.8) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177608 8egb:J (3.8) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177609 8egb:J (3.8) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177610 8egd:A (2.047) BS02 MG 2.7.11.1
    2.7.11.4
    GO:0004672 ... Q00972 36717078
    177611 8egw:A (2.3) BS01 CA ? GO:0005509 ... Q96JQ0 36797229
    177612 8egw:A (2.3) BS02 CA ? GO:0005509 ... Q96JQ0 36797229
    177613 8egw:A (2.3) BS03 CA ? GO:0005509 ... Q96JQ0 36797229
    177614 8egw:A (2.3) BS04 CA ? GO:0005509 ... Q96JQ0 36797229
    177615 8egw:A (2.3) BS05 CA ? GO:0005509 ... Q96JQ0 36797229
    177616 8egw:A (2.3) BS06 CA ? GO:0005509 ... Q96JQ0 36797229
    177617 8egw:B (2.3) BS01 CA ? GO:0005509 ... Q6V0I7 36797229
    177618 8egw:B (2.3) BS02 CA ? GO:0005509 ... Q6V0I7 36797229
    177619 8egw:B (2.3) BS03 CA ? GO:0005509 ... Q6V0I7 36797229
    177620 8egw:B (2.3) BS04 CA ? GO:0005509 ... Q6V0I7 36797229
    177621 8egw:B (2.3) BS05 CA ? GO:0005509 ... Q6V0I7 36797229
    177622 8egw:B (2.3) BS06 CA ? GO:0005509 ... Q6V0I7 36797229
    177623 8egw:B (2.3) BS07 CA ? GO:0005509 ... Q6V0I7 36797229
    177624 8egw:B (2.3) BS08 CA ? GO:0005509 ... Q6V0I7 36797229
    177625 8egw:B (2.3) BS09 CA ? GO:0005509 ... Q6V0I7 36797229
    177626 8egw:B (2.3) BS10 CA ? GO:0005509 ... Q6V0I7 36797229
    177627 8egx:A (3.688) BS01 CA ? GO:0005509 ... Q96JQ0 36797229
    177628 8egx:A (3.688) BS02 CA ? GO:0005509 ... Q96JQ0 36797229
    177629 8egx:A (3.688) BS03 CA ? GO:0005509 ... Q96JQ0 36797229
    177630 8egx:A (3.688) BS04 CA ? GO:0005509 ... Q96JQ0 36797229
    177631 8egx:A (3.688) BS05 CA ? GO:0005509 ... Q96JQ0 36797229
    177632 8egx:A (3.688) BS06 CA ? GO:0005509 ... Q96JQ0 36797229
    177633 8egx:A (3.688) BS07 CA ? GO:0005509 ... Q96JQ0 36797229
    177634 8egx:A (3.688) BS08 CA ? GO:0005509 ... Q96JQ0 36797229
    177635 8egx:A (3.688) BS09 CA ? GO:0005509 ... Q96JQ0 36797229
    177636 8egx:B (3.688) BS01 CA ? GO:0005509 ... Q6V0I7 36797229
    177637 8egx:B (3.688) BS02 CA ? GO:0005509 ... Q6V0I7 36797229
    177638 8egx:B (3.688) BS03 CA ? GO:0005509 ... Q6V0I7 36797229
    177639 8egx:B (3.688) BS04 CA ? GO:0005509 ... Q6V0I7 36797229
    177640 8egx:B (3.688) BS05 CA ? GO:0005509 ... Q6V0I7 36797229
    177641 8egx:B (3.688) BS06 CA ? GO:0005509 ... Q6V0I7 36797229
    177642 8egx:B (3.688) BS07 CA ? GO:0005509 ... Q6V0I7 36797229
    177643 8egx:B (3.688) BS08 CA ? GO:0005509 ... Q6V0I7 36797229
    177644 8egx:B (3.688) BS09 CA ? GO:0005509 ... Q6V0I7 36797229
    177645 8eh8:J (3.4) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177646 8eh8:J (3.4) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177647 8eh8:J (3.4) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177648 8eh9:J (3.9) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177649 8eh9:J (3.9) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177650 8eh9:J (3.9) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177651 8eha:J (3.7) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177652 8eha:J (3.7) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177653 8eha:J (3.7) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177654 8ehe:A (1.1) BS01 CA ? GO:0004252 ... A0A0A7KVG3 36755705
    177655 8ehe:A (1.1) BS02 CA ? GO:0004252 ... A0A0A7KVG3 36755705
    177656 8ehe:A (1.1) BS03 CA ? GO:0004252 ... A0A0A7KVG3 36755705
    177657 8ehe:A (1.1) BS04 CA ? GO:0004252 ... A0A0A7KVG3 36755705
    177658 8ehe:A (1.1) BS05 CA ? GO:0004252 ... A0A0A7KVG3 36755705
    177659 8ehe:A (1.1) BS06 CA ? GO:0004252 ... A0A0A7KVG3 36755705
    177660 8ehf:J (3.3) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177661 8ehf:J (3.3) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177662 8ehf:J (3.3) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177663 8ehi:J (5.5) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177664 8ehi:J (5.5) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177665 8ehi:J (5.5) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36795753
    177666 8ehn:A (2.3) BS01 ZN 3.4.22.- GO:0016032 ... P0DJY0 38096325
    177667 8ehn:B (2.3) BS01 ZN 3.4.22.- GO:0016032 ... P0DJY0 38096325
    177668 8eho:A (2.85) BS01 ZN 3.4.19.12 GO:0016032 ... W0NX70 38096325
    177669 8eho:C (2.85) BS01 ZN 3.4.19.12 GO:0016032 ... W0NX70 38096325
    177670 8eho:E (2.85) BS01 ZN 3.4.19.12 GO:0016032 ... W0NX70 38096325
    177671 8ehq:D (3.0) BS04 MG 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    177672 8ehq:D (3.0) BS05 ZN 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    177673 8ehq:D (3.0) BS06 ZN 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    177674 8ei5:C (2.6) BS02 ZN 2.3.2.26 GO:0004842 ... O00308 37914719
    177675 8ei5:D (2.6) BS02 ZN 2.3.2.26 GO:0004842 ... O00308 37914719
    177676 8ei7:A (2.22) BS02 ZN 2.3.2.26 GO:0004842 ... O00308 37914719
    177677 8eie:A (1.41) BS02 MG 3.6.5.2 GO:0000139 ... P01116 N/A
    177678 8eih:A (3.04) BS02 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177679 8eih:A (3.04) BS03 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177680 8eih:A (3.04) BS04 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177681 8eih:B (3.04) BS02 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177682 8eih:B (3.04) BS03 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177683 8eih:B (3.04) BS04 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177684 8eih:C (3.04) BS01 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177685 8eih:C (3.04) BS02 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177686 8eih:C (3.04) BS03 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177687 8eih:D (3.04) BS01 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177688 8eii:A (3.12) BS02 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177689 8eii:A (3.12) BS03 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177690 8eii:A (3.12) BS04 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177691 8eii:B (3.12) BS02 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177692 8eii:B (3.12) BS03 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177693 8eii:B (3.12) BS04 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177694 8eii:C (3.12) BS01 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177695 8eii:C (3.12) BS02 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177696 8eii:C (3.12) BS03 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177697 8eij:A (3.34) BS02 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177698 8eij:A (3.34) BS03 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177699 8eij:A (3.34) BS04 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177700 8eij:B (3.34) BS02 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177701 8eij:B (3.34) BS03 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177702 8eij:B (3.34) BS04 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177703 8eik:A (3.19) BS02 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177704 8eik:A (3.19) BS03 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177705 8eik:A (3.19) BS04 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177706 8eik:B (3.19) BS02 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177707 8eik:B (3.19) BS03 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177708 8eik:B (3.19) BS04 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177709 8eik:C (3.19) BS02 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177710 8eik:C (3.19) BS03 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177711 8eik:C (3.19) BS04 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177712 8eik:E (3.19) BS02 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177713 8eik:E (3.19) BS03 ZN 2.1.1.37 GO:0008168 ... Q9UBC3 37941146
    177714 8ein:A (2.7) BS01 ZN ? GO:0016787 ... Q6FCQ4 36800389
    177715 8ein:B (2.7) BS01 ZN ? GO:0016787 ... Q6FCQ4 36800389
    177716 8ein:C (2.7) BS01 ZN ? GO:0016787 ... Q6FCQ4 36800389
    177717 8ein:D (2.7) BS01 ZN ? GO:0016787 ... Q6FCQ4 36800389
    177718 8ein:D (2.7) BS02 MN ? GO:0016787 ... Q6FCQ4 36800389
    177719 8eio:A (2.8) BS02 MG 5.6.1.6 GO:0005254 ... P13569 36264792
    177720 8eio:A (2.8) BS03 MG 5.6.1.6 GO:0005254 ... P13569 36264792
    177721 8eip:A (2.24) BS02 ZN ? GO:0016787 ... Q6FCQ4 36800389
    177722 8eip:A (2.24) BS03 MN ? GO:0016787 ... Q6FCQ4 36800389
    177723 8eip:B (2.24) BS02 ZN ? GO:0016787 ... Q6FCQ4 36800389
    177724 8eip:B (2.24) BS03 MN ? GO:0016787 ... Q6FCQ4 36800389
    177725 8eip:C (2.24) BS02 ZN ? GO:0016787 ... Q6FCQ4 36800389
    177726 8eip:C (2.24) BS03 MN ? GO:0016787 ... Q6FCQ4 36800389
    177727 8eip:D (2.24) BS02 ZN ? GO:0016787 ... Q6FCQ4 36800389
    177728 8eip:D (2.24) BS03 MN ? GO:0016787 ... Q6FCQ4 36800389
    177729 8eiq:A (3.0) BS02 MG 5.6.1.6 GO:0005254 ... P13569 36264792
    177730 8eiq:A (3.0) BS03 MG 5.6.1.6 GO:0005254 ... P13569 36264792
    177731 8eiu:3 (2.24) BS02 ZN ? GO:0002181 ... P0A7Q6 36660825
    177732 8eiu:4 (2.24) BS02 ZN ? GO:0002181 ... P0A7M9 36660825
    177733 8eiw:A (1.65) BS01 CO 1.1.1.1 GO:0004022 ... P00327 37563323
    177734 8eiw:A (1.65) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 37563323
    177735 8eiw:B (1.65) BS01 CO 1.1.1.1 GO:0004022 ... P00327 37563323
    177736 8eiw:B (1.65) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 37563323
    177737 8eix:A (2.46) BS01 CO 1.1.1.1 GO:0004022 ... P00327 37563323
    177738 8eix:A (2.46) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 37563323
    177739 8eix:B (2.46) BS01 CO 1.1.1.1 GO:0004022 ... P00327 37563323
    177740 8eix:B (2.46) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 37563323
    177741 8eiy:A (2.55) BS01 CO 1.1.1.1 GO:0004022 ... P00327 37563323
    177742 8eiy:A (2.55) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 37563323
    177743 8eiy:B (2.55) BS01 CO 1.1.1.1 GO:0004022 ... P00327 37563323
    177744 8eiy:B (2.55) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 37563323
    177745 8ej0:A (2.59) BS02 MG ? GO:0016829 ... A0A4R3LQ44 36385513
    177746 8ej0:C (2.59) BS02 MG ? GO:0016829 ... A0A4R3LQ44 36385513
    177747 8ej0:E (2.59) BS02 MG ? GO:0016829 ... A0A4R3LQ44 36385513
    177748 8ej0:G (2.59) BS02 MG ? GO:0016829 ... A0A4R3LQ44 36385513
    177749 8ej3:D (3.13) BS04 MG 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    177750 8ej3:D (3.13) BS05 ZN 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    177751 8ej3:D (3.13) BS06 ZN 2.7.7.6 GO:0000287 ... P9WGY7 36745813
    177752 8ej4:A (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    177753 8ej4:B (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    177754 8ej4:C (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    177755 8ej4:D (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    177756 8ej4:E (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    177757 8ej4:F (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    177758 8ej4:G (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    177759 8ej4:H (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    177760 8ej4:I (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    177761 8ej4:J (3.4) BS02 MG 3.6.4.- N/A Q96P20 36442502
    177762 8ek7:C (1.65) BS01 MG N/A GO:0004590 ... N/A N/A
    177763 8ek7:E (1.65) BS01 MG N/A GO:0004590 ... N/A N/A
    177764 8ekb:10 (2.7) BS03 MG ? GO:0003735 ... P60493 36546783
    177765 8ekb:10 (2.7) BS04 MG ? GO:0003735 ... P60493 36546783
    177766 8ekb:10 (2.7) BS05 MG ? GO:0003735 ... P60493 36546783
    177767 8ekb:11 (2.7) BS02 MG ? GO:0003735 ... P60494 36546783
    177768 8ekb:12 (2.7) BS02 MG ? GO:0003735 ... Q5SHP6 36546783
    177769 8ekb:13 (2.7) BS03 MG ? GO:0003735 ... Q5SHQ6 36546783
    177770 8ekb:14 (2.7) BS02 ZN ? GO:0003735 ... Q5SJE1 36546783
    177771 8ekb:15 (2.7) BS02 ZN ? GO:0003735 ... P80339 36546783
    177772 8ekb:16 (2.7) BS02 MG ? GO:0000049 ... P35871 36546783
    177773 8ekb:16 (2.7) BS03 ZN ? GO:0000049 ... P35871 36546783
    177774 8ekb:17 (2.7) BS02 MG ? GO:0003735 ... P80340 36546783
    177775 8ekb:17 (2.7) BS03 MG ? GO:0003735 ... P80340 36546783
    177776 8ekb:17 (2.7) BS04 MG ? GO:0003735 ... P80340 36546783
    177777 8ekb:18 (2.7) BS02 MG ? GO:0003735 ... Q5SKU1 36546783
    177778 8ekb:18 (2.7) BS03 MG ? GO:0003735 ... Q5SKU1 36546783
    177779 8ekb:18 (2.7) BS04 MG ? GO:0003735 ... Q5SKU1 36546783
    177780 8ekb:19 (2.7) BS02 ZN ? GO:0003735 ... Q5SHR2 36546783
    177781 8ekb:1D (2.7) BS03 MG ? GO:0002181 ... P60405 36546783
    177782 8ekb:1D (2.7) BS04 MG ? GO:0002181 ... P60405 36546783
    177783 8ekb:1D (2.7) BS05 MG ? GO:0002181 ... P60405 36546783
    177784 8ekb:1D (2.7) BS06 MG ? GO:0002181 ... P60405 36546783
    177785 8ekb:1D (2.7) BS07 MG ? GO:0002181 ... P60405 36546783
    177786 8ekb:1D (2.7) BS08 MG ? GO:0002181 ... P60405 36546783
    177787 8ekb:1D (2.7) BS09 MG ? GO:0002181 ... P60405 36546783
    177788 8ekb:1D (2.7) BS10 MG ? GO:0002181 ... P60405 36546783
    177789 8ekb:1D (2.7) BS11 MG ? GO:0002181 ... P60405 36546783
    177790 8ekb:1D (2.7) BS12 MG ? GO:0002181 ... P60405 36546783
    177791 8ekb:1D (2.7) BS13 MG ? GO:0002181 ... P60405 36546783
    177792 8ekb:1E (2.7) BS02 MG ? GO:0003735 ... Q5SHN8 36546783
    177793 8ekb:1E (2.7) BS03 MG ? GO:0003735 ... Q5SHN8 36546783
    177794 8ekb:1E (2.7) BS04 MG ? GO:0003735 ... Q5SHN8 36546783
    177795 8ekb:1E (2.7) BS05 MG ? GO:0003735 ... Q5SHN8 36546783
    177796 8ekb:1E (2.7) BS06 MG ? GO:0003735 ... Q5SHN8 36546783
    177797 8ekb:1F (2.7) BS02 MG ? GO:0003735 ... Q5SHN9 36546783
    177798 8ekb:1F (2.7) BS03 MG ? GO:0003735 ... Q5SHN9 36546783
    177799 8ekb:1F (2.7) BS04 MG ? GO:0003735 ... Q5SHN9 36546783
    177800 8ekb:1F (2.7) BS05 MG ? GO:0003735 ... Q5SHN9 36546783

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218