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BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    164001 7t63:B (2.0) BS01 FE2 N/A GO:0006631 ... N/A 35867834
    164002 7t63:B (2.0) BS02 FE2 N/A GO:0006631 ... N/A 35867834
    164003 7t64:A (4.0) BS01 ZN ? GO:0003151 ... P11716 35867837
    164004 7t64:B (4.0) BS01 ZN ? GO:0003151 ... P11716 35867837
    164005 7t64:C (4.0) BS01 ZN ? GO:0003151 ... P11716 35867837
    164006 7t64:D (4.0) BS01 ZN ? GO:0003151 ... P11716 35867837
    164007 7t65:A (4.05) BS02 CA ? GO:0003151 ... P11716 35867837
    164008 7t65:A (4.05) BS03 ZN ? GO:0003151 ... P11716 35867837
    164009 7t65:B (4.05) BS02 CA ? GO:0003151 ... P11716 35867837
    164010 7t65:B (4.05) BS03 ZN ? GO:0003151 ... P11716 35867837
    164011 7t65:C (4.05) BS02 CA ? GO:0003151 ... P11716 35867837
    164012 7t65:C (4.05) BS03 ZN ? GO:0003151 ... P11716 35867837
    164013 7t65:D (4.05) BS02 CA ? GO:0003151 ... P11716 35867837
    164014 7t65:D (4.05) BS03 ZN ? GO:0003151 ... P11716 35867837
    164015 7t7i:B (3.97) BS01 ZN ? GO:0046765 ... P0CK47 35802751
    164016 7t7i:D (3.97) BS01 ZN ? GO:0046765 ... P0CK47 35802751
    164017 7t7i:F (3.97) BS01 ZN ? GO:0046765 ... P0CK47 35802751
    164018 7t7i:H (3.97) BS01 ZN ? GO:0046765 ... P0CK47 35802751
    164019 7t7i:J (3.97) BS01 ZN ? GO:0046765 ... P0CK47 35802751
    164020 7t7k:A (1.9) BS02 CO 3.1.3.- GO:0004427 ... Q9UT55 35314193
    164021 7t7k:A (1.9) BS03 CO 3.1.3.- GO:0004427 ... Q9UT55 35314193
    164022 7t7k:B (1.9) BS03 CO 3.1.3.- GO:0004427 ... Q9UT55 35314193
    164023 7t7k:B (1.9) BS04 CO 3.1.3.- GO:0004427 ... Q9UT55 35314193
    164024 7t7l:A (2.2) BS01 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 35763668
    164025 7t7l:A (2.2) BS02 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 35763668
    164026 7t7l:A (2.2) BS03 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 35763668
    164027 7t7l:A (2.2) BS04 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 35763668
    164028 7t7l:B (2.2) BS01 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 35763668
    164029 7t7l:B (2.2) BS02 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 35763668
    164030 7t7l:B (2.2) BS03 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 35763668
    164031 7t7l:B (2.2) BS04 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 35763668
    164032 7t7l:C (2.2) BS01 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 35763668
    164033 7t7l:C (2.2) BS02 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 35763668
    164034 7t7l:C (2.2) BS03 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 35763668
    164035 7t7l:C (2.2) BS04 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 35763668
    164036 7t7l:D (2.2) BS01 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 35763668
    164037 7t7l:D (2.2) BS02 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 35763668
    164038 7t7l:D (2.2) BS03 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 35763668
    164039 7t7l:D (2.2) BS04 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 35763668
    164040 7t7m:A (2.85) BS01 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q9H9B1 35763668
    164041 7t7m:A (2.85) BS02 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q9H9B1 35763668
    164042 7t7m:A (2.85) BS03 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q9H9B1 35763668
    164043 7t7m:A (2.85) BS04 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q9H9B1 35763668
    164044 7t7m:B (2.85) BS01 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q9H9B1 35763668
    164045 7t7m:B (2.85) BS02 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q9H9B1 35763668
    164046 7t7m:B (2.85) BS03 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q9H9B1 35763668
    164047 7t7m:B (2.85) BS04 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q9H9B1 35763668
    164048 7t7m:C (2.85) BS01 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q9H9B1 35763668
    164049 7t7m:C (2.85) BS02 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q9H9B1 35763668
    164050 7t7m:C (2.85) BS03 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q9H9B1 35763668
    164051 7t7m:C (2.85) BS04 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q9H9B1 35763668
    164052 7t7m:D (2.85) BS01 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q9H9B1 35763668
    164053 7t7m:D (2.85) BS02 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q9H9B1 35763668
    164054 7t7m:D (2.85) BS03 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q9H9B1 35763668
    164055 7t7m:D (2.85) BS04 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q9H9B1 35763668
    164056 7t7o:A (2.16) BS01 CO 3.1.3.- GO:0004427 ... Q9UT55 35314193
    164057 7t7o:B (2.16) BS01 CO 3.1.3.- GO:0004427 ... Q9UT55 35314193
    164058 7t80:A (2.301) BS01 CA ? GO:0005509 ... Q99PF4 N/A
    164059 7t80:A (2.301) BS02 CA ? GO:0005509 ... Q99PF4 N/A
    164060 7t80:A (2.301) BS03 CA ? GO:0005509 ... Q99PF4 N/A
    164061 7t80:B (2.301) BS01 CA ? GO:0005509 ... Q99PF4 N/A
    164062 7t80:B (2.301) BS02 CA ? GO:0005509 ... Q99PF4 N/A
    164063 7t80:B (2.301) BS03 CA ? GO:0005509 ... Q99PF4 N/A
    164064 7t85:A (2.0) BS01 ZN 2.3.1.8 N/A P0A9M8 N/A
    164065 7t85:A (2.0) BS02 ZN 2.3.1.8 N/A P0A9M8 N/A
    164066 7t8d:A (1.38) BS01 CA ? N/A Q99972 36579626
    164067 7t8e:A (1.4) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 38802492
    164068 7t8e:A (1.4) BS02 ZN 1.15.1.1 GO:0000302 ... P00441 38802492
    164069 7t8e:F (1.4) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 38802492
    164070 7t8e:F (1.4) BS02 ZN 1.15.1.1 GO:0000302 ... P00441 38802492
    164071 7t8f:A (1.4) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 38802492
    164072 7t8f:A (1.4) BS03 ZN 1.15.1.1 GO:0000302 ... P00441 38802492
    164073 7t8f:F (1.4) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 38802492
    164074 7t8f:F (1.4) BS03 ZN 1.15.1.1 GO:0000302 ... P00441 38802492
    164075 7t8g:A (1.35) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 38802492
    164076 7t8g:A (1.35) BS03 ZN 1.15.1.1 GO:0000302 ... P00441 38802492
    164077 7t8g:F (1.35) BS02 ZN 1.15.1.1 GO:0000302 ... P00441 38802492
    164078 7t8g:F (1.35) BS03 ZN 1.15.1.1 GO:0000302 ... P00441 38802492
    164079 7t8h:A (1.5) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 38802492
    164080 7t8h:A (1.5) BS03 ZN 1.15.1.1 GO:0000302 ... P00441 38802492
    164081 7t8h:F (1.5) BS01 ZN 1.15.1.1 GO:0000302 ... P00441 38802492
    164082 7t8h:F (1.5) BS03 ZN 1.15.1.1 GO:0000302 ... P00441 38802492
    164083 7t8p:A (1.9) BS01 FE2 1.13.11.- GO:0010436 ... Q7S860 N/A
    164084 7t8p:B (1.9) BS01 FE2 1.13.11.- GO:0010436 ... Q7S860 N/A
    164085 7t8p:C (1.9) BS01 FE2 1.13.11.- GO:0010436 ... Q7S860 N/A
    164086 7t8p:D (1.9) BS01 FE2 1.13.11.- GO:0010436 ... Q7S860 N/A
    164087 7t8q:A (2.15) BS01 FE2 1.13.11.- GO:0010436 ... Q7S860 N/A
    164088 7t8q:B (2.15) BS01 FE2 1.13.11.- GO:0010436 ... Q7S860 N/A
    164089 7t8q:C (2.15) BS01 FE2 1.13.11.- GO:0010436 ... Q7S860 N/A
    164090 7t8q:D (2.15) BS01 FE2 1.13.11.- GO:0010436 ... Q7S860 N/A
    164091 7t8t:A (3.68) BS01 CA 3.1.4.11 GO:0001701 ... P10686 N/A
    164092 7t91:A (2.05) BS01 ZN ? GO:0000977 ... P08151 N/A
    164093 7t91:A (2.05) BS02 ZN ? GO:0000977 ... P08151 N/A
    164094 7t91:B (2.05) BS01 ZN ? GO:0000977 ... P08151 N/A
    164095 7t91:B (2.05) BS02 ZN ? GO:0000977 ... P08151 N/A
    164096 7t92:A (3.1) BS01 ZN 2.3.2.36 GO:0005778 ... G2Q1C9 35768507
    164097 7t92:A (3.1) BS02 ZN 2.3.2.36 GO:0005778 ... G2Q1C9 35768507
    164098 7t92:B (3.1) BS01 ZN ? GO:0004842 ... G2Q5N0 35768507
    164099 7t92:C (3.1) BS01 ZN 2.3.2.27 GO:0005777 ... G2Q0E2 35768507
    164100 7t92:C (3.1) BS02 ZN 2.3.2.27 GO:0005777 ... G2Q0E2 35768507
    164101 7t9g:A (2.83) BS01 NA ? GO:0005886 ... Q9KNE0 35551191
    164102 7t9g:A (2.83) BS02 NA ? GO:0005886 ... Q9KNE0 35551191
    164103 7t9g:Y (2.83) BS01 NA ? GO:0005886 ... Q9KNE0 35551191
    164104 7t9g:Y (2.83) BS02 NA ? GO:0005886 ... Q9KNE0 35551191
    164105 7t9h:A (2.53) BS01 MG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 35235334
    164106 7t9h:B (2.53) BS02 MG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 35235334
    164107 7t9u:A (2.46) BS01 CA ? GO:0002218 ... Q86WV6 35595822
    164108 7t9v:A (2.68) BS01 CA ? GO:0002218 ... Q86WV6 35595822
    164109 7t9v:B (2.68) BS02 CA ? GO:0002218 ... Q86WV6 35595822
    164110 7t9x:A (1.52) BS01 ZN ? GO:0005778 ... Q04370 35768507
    164111 7t9x:B (1.52) BS01 ZN ? GO:0005778 ... Q04370 35768507
    164112 7taa:A (1.98) BS02 CA 3.2.1.1 GO:0004556 ... P0C1B3 9283074
    164113 7tac:A (3.6) BS01 ZN ? GO:0001666 ... P93002 35545668
    164114 7tac:B (3.6) BS01 ZN ? GO:0001666 ... P93002 35545668
    164115 7tad:A (3.6) BS01 ZN ? GO:0001666 ... P93002 35545668
    164116 7tad:B (3.6) BS01 ZN ? GO:0001666 ... P93002 35545668
    164117 7tam:A (1.87) BS02 MG 3.6.5.2 GO:0003924 ... P01112 N/A
    164118 7tav:B (2.75) BS01 CA ? GO:0015689 ... A0A5D5LL32 N/A
    164119 7tav:C (2.75) BS01 CA ? GO:0015689 ... A0A5D5LL32 N/A
    164120 7tav:F (2.75) BS01 CA ? GO:0015689 ... A0A5D5LL32 N/A
    164121 7tba:A (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    164122 7tba:A (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    164123 7tba:B (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    164124 7tba:B (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    164125 7tba:C (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    164126 7tba:C (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    164127 7tba:D (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    164128 7tba:D (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    164129 7tba:E (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    164130 7tba:E (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    164131 7tba:F (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    164132 7tba:F (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    164133 7tba:G (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    164134 7tba:G (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    164135 7tba:H (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    164136 7tba:H (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    164137 7tba:I (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    164138 7tba:I (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    164139 7tba:J (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    164140 7tba:J (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    164141 7tba:K (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    164142 7tba:K (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    164143 7tba:L (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    164144 7tba:L (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    164145 7tba:M (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    164146 7tba:M (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    164147 7tba:N (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    164148 7tba:N (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    164149 7tba:O (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    164150 7tba:O (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    164151 7tba:P (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    164152 7tba:P (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    164153 7tba:Q (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    164154 7tba:Q (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    164155 7tba:R (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    164156 7tba:R (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    164157 7tba:S (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    164158 7tba:S (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    164159 7tba:T (3.5) BS02 CA ? GO:0001849 ... P02741 36468184
    164160 7tba:T (3.5) BS03 CA ? GO:0001849 ... P02741 36468184
    164161 7tbq:D (2.678) BS02 MG N/A N/A N/A N/A
    164162 7tbr:A (1.1) BS01 MG N/A N/A N/A N/A
    164163 7tbv:A (2.3) BS01 MG 1.1.1.25
    2.5.1.19
    2.7.1.71
    4.2.1.10
    4.2.3.4
    GO:0003855 ... Q5AME2 35512834
    164164 7tbv:B (2.3) BS01 MG 1.1.1.25
    2.5.1.19
    2.7.1.71
    4.2.1.10
    4.2.3.4
    GO:0003855 ... Q5AME2 35512834
    164165 7tbv:C (2.3) BS01 MG 1.1.1.25
    2.5.1.19
    2.7.1.71
    4.2.1.10
    4.2.3.4
    GO:0003855 ... Q5AME2 35512834
    164166 7tbv:D (2.3) BS01 MG 1.1.1.25
    2.5.1.19
    2.7.1.71
    4.2.1.10
    4.2.3.4
    GO:0003855 ... Q5AME2 35512834
    164167 7tbw:A (3.1) BS04 MG 7.6.2.1 GO:0002790 ... O95477 37181814
    164168 7tbw:A (3.1) BS05 MG 7.6.2.1 GO:0002790 ... O95477 37181814
    164169 7tc5:A (1.45) BS01 CU ? GO:0005507 ... P00282 35347989
    164170 7tc5:A (1.45) BS02 CU ? GO:0005507 ... P00282 35347989
    164171 7tc5:B (1.45) BS01 CU ? GO:0005507 ... P00282 35347989
    164172 7tc5:B (1.45) BS02 CU ? GO:0005507 ... P00282 35347989
    164173 7tc6:A (1.85) BS01 CU ? GO:0005507 ... P00282 35347989
    164174 7tc6:A (1.85) BS02 CU ? GO:0005507 ... P00282 35347989
    164175 7tc6:B (1.85) BS01 CU ? GO:0005507 ... P00282 35347989
    164176 7tc7:D (2.9) BS01 FE 1.14.13.25 GO:0004497 ... P22869 36926824
    164177 7tc7:D (2.9) BS02 FE 1.14.13.25 GO:0004497 ... P22869 36926824
    164178 7tc7:E (2.9) BS01 FE 1.14.13.25 GO:0004497 ... P22869 36926824
    164179 7tc7:E (2.9) BS02 FE 1.14.13.25 GO:0004497 ... P22869 36926824
    164180 7tc8:D (2.4) BS01 FE 1.14.13.25 GO:0004497 ... P22869 36926824
    164181 7tc8:D (2.4) BS02 FE 1.14.13.25 GO:0004497 ... P22869 36926824
    164182 7tc8:E (2.4) BS01 FE 1.14.13.25 GO:0004497 ... P22869 36926824
    164183 7tc8:E (2.4) BS02 FE 1.14.13.25 GO:0004497 ... P22869 36926824
    164184 7tci:B (3.9) BS01 CA ? GO:0000086 ... P0DP23 35768468
    164185 7tci:B (3.9) BS02 CA ? GO:0000086 ... P0DP23 35768468
    164186 7tci:B (3.9) BS03 CA ? GO:0000086 ... P0DP23 35768468
    164187 7tci:D (3.9) BS01 CA ? GO:0000086 ... P0DP23 35768468
    164188 7tci:D (3.9) BS02 CA ? GO:0000086 ... P0DP23 35768468
    164189 7tci:D (3.9) BS03 CA ? GO:0000086 ... P0DP23 35768468
    164190 7tci:F (3.9) BS01 CA ? GO:0000086 ... P0DP23 35768468
    164191 7tci:F (3.9) BS02 CA ? GO:0000086 ... P0DP23 35768468
    164192 7tci:F (3.9) BS03 CA ? GO:0000086 ... P0DP23 35768468
    164193 7tci:H (3.9) BS01 CA ? GO:0000086 ... P0DP23 35768468
    164194 7tci:H (3.9) BS02 CA ? GO:0000086 ... P0DP23 35768468
    164195 7tci:H (3.9) BS03 CA ? GO:0000086 ... P0DP23 35768468
    164196 7tcl:X (1.97) BS01 MN ? GO:0016491 ... Q7N3A2 36097268
    164197 7tcp:B (3.84) BS01 CA ? GO:0000086 ... P0DP23 35768468
    164198 7tcp:B (3.84) BS02 CA ? GO:0000086 ... P0DP23 35768468
    164199 7tcp:B (3.84) BS03 CA ? GO:0000086 ... P0DP23 35768468
    164200 7tcp:D (3.84) BS01 CA ? GO:0000086 ... P0DP23 35768468

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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