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BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    158601 7os5:BBB (1.293) BS01 ZN ? GO:0046872 ... Q2K0Z2 34795296
    158602 7os6:AAA (1.43) BS01 ZN ? GO:0046872 ... Q2K0Z2 34795296
    158603 7os6:BBB (1.43) BS01 ZN ? GO:0046872 ... Q2K0Z2 34795296
    158604 7os6:CCC (1.43) BS01 ZN ? GO:0046872 ... Q2K0Z2 34795296
    158605 7os6:DDD (1.43) BS01 ZN ? GO:0046872 ... Q2K0Z2 34795296
    158606 7osa:eEF2 (3.0) BS03 MG ? GO:0003924 ... N/A 34853469
    158607 7osa:eL30 (3.0) BS02 MG N/A GO:0003723 ... N/A 34853469
    158608 7osa:eL34 (3.0) BS02 MG N/A GO:0003735 ... N/A 34853469
    158609 7osa:eL34 (3.0) BS03 ZN N/A GO:0003735 ... N/A 34853469
    158610 7osa:eL37 (3.0) BS03 ZN N/A GO:0003735 ... N/A 34853469
    158611 7osa:eL40 (3.0) BS02 ZN N/A GO:0003735 ... N/A 34853469
    158612 7osa:eL42 (3.0) BS03 ZN N/A GO:0003735 ... N/A 34853469
    158613 7osa:eL43 (3.0) BS03 ZN ? GO:0002181 ... P0CX25 34853469
    158614 7osa:eS26 (3.0) BS02 ZN ? GO:0003735 ... N/A 34853469
    158615 7osa:eS31 (3.0) BS02 ZN ? GO:0003735 ... N/A 34853469
    158616 7osa:uL16 (3.0) BS03 MG ? GO:0003735 ... N/A 34853469
    158617 7osa:uL2 (3.0) BS03 MG N/A GO:0003735 ... N/A 34853469
    158618 7osa:uS11 (3.0) BS02 MG N/A GO:0003735 ... N/A 34853469
    158619 7osa:uS12 (3.0) BS02 MG N/A GO:0003735 ... N/A 34853469
    158620 7osa:uS14 (3.0) BS02 ZN ? GO:0003735 ... N/A 34853469
    158621 7osf:A (3.8) BS01 MG ? N/A P19843 35896743
    158622 7osf:A (3.8) BS02 CU ? N/A P19843 35896743
    158623 7osf:H (3.8) BS01 ZN ? N/A Q52529 35896743
    158624 7osg:A (3.3) BS01 MG ? N/A P19843 35896743
    158625 7osg:A (3.3) BS02 CU ? N/A P19843 35896743
    158626 7osg:H (3.3) BS01 ZN ? N/A Q52529 35896743
    158627 7osh:A (3.8) BS01 MG ? N/A P19843 35896743
    158628 7osh:A (3.8) BS02 CU ? N/A P19843 35896743
    158629 7osh:H (3.8) BS01 ZN ? N/A Q52529 35896743
    158630 7osi:A (3.8) BS01 MG ? N/A P19843 35896743
    158631 7osi:A (3.8) BS02 CU ? N/A P19843 35896743
    158632 7osi:H (3.8) BS01 ZN ? N/A Q52529 35896743
    158633 7osj:A (3.8) BS01 MG ? N/A P19843 35896743
    158634 7osj:A (3.8) BS02 CU ? N/A P19843 35896743
    158635 7osj:H (3.8) BS01 ZN ? N/A Q52529 35896743
    158636 7osk:A (2.65) BS01 CA 3.2.1.89 GO:0015926 ... E0SSW8 34530892
    158637 7osk:B (2.65) BS01 CA 3.2.1.89 GO:0015926 ... E0SSW8 34530892
    158638 7osm:eEF2 (3.0) BS04 MG ? GO:0003924 ... N/A 34853469
    158639 7osm:eEF2 (3.0) BS05 MG ? GO:0003924 ... N/A 34853469
    158640 7osm:eEF2 (3.0) BS06 MG ? GO:0003924 ... N/A 34853469
    158641 7osm:eL32 (3.0) BS02 MG N/A GO:0003735 ... N/A 34853469
    158642 7osm:eL34 (3.0) BS02 ZN N/A GO:0003735 ... N/A 34853469
    158643 7osm:eL37 (3.0) BS03 ZN N/A GO:0003735 ... N/A 34853469
    158644 7osm:eL40 (3.0) BS02 ZN N/A GO:0003735 ... N/A 34853469
    158645 7osm:eL42 (3.0) BS03 ZN N/A GO:0003735 ... N/A 34853469
    158646 7osm:eL43 (3.0) BS02 ZN ? GO:0002181 ... P0CX25 34853469
    158647 7osm:eS26 (3.0) BS02 ZN ? GO:0003735 ... N/A 34853469
    158648 7osm:eS31 (3.0) BS02 ZN ? GO:0003735 ... N/A 34853469
    158649 7osm:eS6 (3.0) BS02 MG N/A GO:0003735 ... N/A 34853469
    158650 7osm:uL16 (3.0) BS03 MG ? GO:0003735 ... N/A 34853469
    158651 7osm:uL2 (3.0) BS03 MG N/A GO:0003735 ... N/A 34853469
    158652 7osm:uL2 (3.0) BS04 MG N/A GO:0003735 ... N/A 34853469
    158653 7oso:A (1.4) BS01 ZN 2.4.1.10 GO:0009758 ... B2VCC3 35924596
    158654 7oso:A (1.4) BS02 ZN 2.4.1.10 GO:0009758 ... B2VCC3 35924596
    158655 7oso:A (1.4) BS03 ZN 2.4.1.10 GO:0009758 ... B2VCC3 35924596
    158656 7osy:A (2.23) BS02 ZN 6.1.1.15
    6.1.1.17
    GO:0000166 ... P07814 34360555
    158657 7osy:B (2.23) BS02 ZN 6.1.1.15
    6.1.1.17
    GO:0000166 ... P07814 34360555
    158658 7osz:A (2.46) BS03 ZN 6.1.1.15
    6.1.1.17
    GO:0000166 ... P07814 34360555
    158659 7osz:B (2.46) BS03 ZN 6.1.1.15
    6.1.1.17
    GO:0000166 ... P07814 34360555
    158660 7ot0:A (2.32) BS03 ZN 6.1.1.15
    6.1.1.17
    GO:0000166 ... P07814 34360555
    158661 7ot0:B (2.32) BS03 ZN 6.1.1.15
    6.1.1.17
    GO:0000166 ... P07814 34360555
    158662 7ot1:A (2.71) BS03 ZN 6.1.1.15
    6.1.1.17
    GO:0000166 ... P07814 34360555
    158663 7ot1:B (2.71) BS03 ZN 6.1.1.15
    6.1.1.17
    GO:0000166 ... P07814 34360555
    158664 7ot2:A (2.48) BS03 ZN 6.1.1.15
    6.1.1.17
    GO:0000166 ... P07814 34360555
    158665 7ot2:B (2.48) BS03 ZN 6.1.1.15
    6.1.1.17
    GO:0000166 ... P07814 34360555
    158666 7ot3:A (2.53) BS03 ZN 6.1.1.15
    6.1.1.17
    GO:0000166 ... P07814 34360555
    158667 7ot3:B (2.53) BS03 ZN 6.1.1.15
    6.1.1.17
    GO:0000166 ... P07814 34360555
    158668 7ot5:T (2.9) BS02 MG N/A GO:0003723 ... N/A 34994471
    158669 7ot5:Z (2.9) BS03 ZN N/A GO:0003735 ... N/A 34994471
    158670 7ot5:e (2.9) BS02 ZN ? GO:0002181 ... P0A7Q6 34994471
    158671 7ot5:h (2.9) BS02 MG N/A GO:0003723 ... N/A 34994471
    158672 7ot5:q (2.9) BS03 MG ? GO:0000049 ... B7LHZ5 34994471
    158673 7ot6:A (3.2) BS03 MG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 34425311
    158674 7otc:4 (2.9) BS02 ZN ? GO:0003735 ... A0A140N5M6 35500116
    158675 7otc:5 (2.9) BS02 ZN ? GO:0003735 ... A0A140SS71 35500116
    158676 7otc:C (2.9) BS03 MG ? GO:0002181 ... A0A140N7J1 35500116
    158677 7otc:U (2.9) BS02 MG ? GO:0003723 ... A0A140N5L7 35500116
    158678 7otn:A (3.4) BS03 MN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 34425311
    158679 7otn:C (3.4) BS03 MN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 34425311
    158680 7oto:B (3.4) BS01 MG ? GO:0000018 ... P23909 35013597
    158681 7otp:A (3.4) BS02 MG 2.7.11.1 GO:0000460 ... P78527 34987222
    158682 7otp:A (3.4) BS03 MG 2.7.11.1 GO:0000460 ... P78527 34987222
    158683 7otx:A (3.45) BS03 MG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 34425311
    158684 7otz:A (3.1) BS03 MG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 34425311
    158685 7ou0:B (3.8) BS01 MG ? GO:0000018 ... P23909 35013597
    158686 7ou1:AAA (1.65) BS01 ZN ? GO:0046872 ... Q2K0Z2 34795296
    158687 7ou1:BBB (1.65) BS01 ZN ? GO:0046872 ... Q2K0Z2 34795296
    158688 7ou1:CCC (1.65) BS01 ZN ? GO:0046872 ... Q2K0Z2 34795296
    158689 7ou1:DDD (1.65) BS01 ZN ? GO:0046872 ... Q2K0Z2 34795296
    158690 7ou8:BBB (1.5) BS02 CA 3.2.1.169 N/A Q89ZI2 N/A
    158691 7ouf:A (3.0) BS02 ZN ? GO:0003676 ... Q4QY51 34404793
    158692 7ouf:B (3.0) BS05 ZN ? GO:0003676 ... Q4QY51 34404793
    158693 7ouf:B (3.0) BS06 MG ? GO:0003676 ... Q4QY51 34404793
    158694 7ouf:B (3.0) BS07 MG ? GO:0003676 ... Q4QY51 34404793
    158695 7ouf:D (3.0) BS01 ZN ? GO:0003676 ... Q4QY51 34404793
    158696 7ouf:E (3.0) BS04 ZN ? GO:0003676 ... Q4QY51 34404793
    158697 7ouf:E (3.0) BS05 MG ? GO:0003676 ... Q4QY51 34404793
    158698 7ouf:E (3.0) BS06 MG ? GO:0003676 ... Q4QY51 34404793
    158699 7oug:A (3.1) BS01 ZN ? GO:0003676 ... Q4QY51 34404793
    158700 7oug:B (3.1) BS04 ZN ? GO:0003676 ... Q4QY51 34404793
    158701 7oug:B (3.1) BS05 MG ? GO:0003676 ... Q4QY51 34404793
    158702 7oug:B (3.1) BS06 MG ? GO:0003676 ... Q4QY51 34404793
    158703 7oug:D (3.1) BS01 ZN ? GO:0003676 ... Q4QY51 34404793
    158704 7oug:E (3.1) BS04 ZN ? GO:0003676 ... Q4QY51 34404793
    158705 7oug:E (3.1) BS05 MG ? GO:0003676 ... Q4QY51 34404793
    158706 7oug:E (3.1) BS06 MG ? GO:0003676 ... Q4QY51 34404793
    158707 7ouh:A (3.5) BS03 ZN ? GO:0003676 ... Q4QY51 34404793
    158708 7ouh:B (3.5) BS05 ZN ? GO:0003676 ... Q4QY51 34404793
    158709 7ouh:B (3.5) BS06 MG ? GO:0003676 ... Q4QY51 34404793
    158710 7ouh:B (3.5) BS07 MG ? GO:0003676 ... Q4QY51 34404793
    158711 7ouh:D (3.5) BS03 ZN ? GO:0003676 ... Q4QY51 34404793
    158712 7ouh:E (3.5) BS05 ZN ? GO:0003676 ... Q4QY51 34404793
    158713 7ouh:E (3.5) BS06 MG ? GO:0003676 ... Q4QY51 34404793
    158714 7ouh:E (3.5) BS07 MG ? GO:0003676 ... Q4QY51 34404793
    158715 7oui:A (2.79) BS09 FE2 1.10.3.9 GO:0003729 ... P83755 34330992
    158716 7oui:A (2.79) BS10 CA 1.10.3.9 GO:0003729 ... P83755 34330992
    158717 7oui:D (2.79) BS07 FE2 1.10.3.9 GO:0003729 ... P56761 34330992
    158718 7oui:a (2.79) BS10 FE2 1.10.3.9 GO:0003729 ... P83755 34330992
    158719 7oui:a (2.79) BS11 CA 1.10.3.9 GO:0003729 ... P83755 34330992
    158720 7oui:d (2.79) BS07 FE2 1.10.3.9 GO:0003729 ... P56761 34330992
    158721 7oup:A (2.65) BS02 ZN 3.4.14.4 GO:0004177 ... Q9NY33 34314529
    158722 7oup:A (2.65) BS03 MG 3.4.14.4 GO:0004177 ... Q9NY33 34314529
    158723 7out:A (3.2) BS03 MG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 34425311
    158724 7ov2:A (2.1) BS16 FE 3.1.3.2 GO:0003993 ... P09889 34331400
    158725 7ov2:A (2.1) BS17 FE 3.1.3.2 GO:0003993 ... P09889 34331400
    158726 7ov3:A (2.0) BS05 FE 3.1.3.2 GO:0003993 ... P09889 34331400
    158727 7ov3:A (2.0) BS06 FE 3.1.3.2 GO:0003993 ... P09889 34331400
    158728 7ov8:A (2.3) BS04 FE 3.1.3.2 GO:0003993 ... P09889 34331400
    158729 7ov8:A (2.3) BS05 FE 3.1.3.2 GO:0003993 ... P09889 34331400
    158730 7ov9:A (1.9) BS01 ZN 2.4.2.29 GO:0000049 ... B8ZXI1 35815944
    158731 7ov9:C (1.9) BS01 ZN 2.4.2.64 GO:0005515 ... Q9JMA2 35815944
    158732 7ova:AAA (1.75) BS01 CU 3.2.1.4 N/A A1D2G7 N/A
    158733 7ova:BBB (1.75) BS01 CU 3.2.1.4 N/A A1D2G7 N/A
    158734 7ova:CCC (1.75) BS01 CU 3.2.1.4 N/A A1D2G7 N/A
    158735 7ova:DDD (1.75) BS01 CU 3.2.1.4 N/A A1D2G7 N/A
    158736 7ovb:C (3.61) BS01 ZN ? GO:0005737 ... Q5ZYB7 34816517
    158737 7ove:A (1.92) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 34626878
    158738 7ove:A (1.92) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 34626878
    158739 7ovf:A (1.9) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 34626878
    158740 7ovf:A (1.9) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 34626878
    158741 7ovh:A (1.8) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 34626878
    158742 7ovh:A (1.8) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 34626878
    158743 7ovo:A (2.1) BS01 ZN 2.4.2.29 GO:0000049 ... B8ZXI1 35815944
    158744 7ovo:C (2.1) BS02 ZN 2.4.2.64 GO:0005515 ... Q9JMA2 35815944
    158745 7ovs:A (2.6) BS01 ZN 2.4.2.29 GO:0000049 ... B8ZXI1 35815944
    158746 7ovs:C (2.6) BS01 ZN 2.4.2.64 GO:0005515 ... Q9JMA2 35815944
    158747 7ovy:A (1.24) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 35111280
    158748 7ovy:A (1.24) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 35111280
    158749 7ovy:A (1.24) BS03 CA 3.4.24.65 GO:0004222 ... P39900 35111280
    158750 7ovy:A (1.24) BS04 CA 3.4.24.65 GO:0004222 ... P39900 35111280
    158751 7ovy:A (1.24) BS05 CA 3.4.24.65 GO:0004222 ... P39900 35111280
    158752 7ow7:d (2.4) BS03 ZN ? GO:0002181 ... P61927 N/A
    158753 7ow7:i (2.4) BS02 ZN ? GO:0002181 ... P83881 N/A
    158754 7ow7:j (2.4) BS02 ZN ? GO:0002181 ... P61513 N/A
    158755 7ow8:A (3.5) BS02 MG 7.6.2.- GO:0005524 ... O06967 35080979
    158756 7ow8:B (3.5) BS03 MG 7.6.2.- GO:0005524 ... O06967 35080979
    158757 7owf:A (1.91) BS03 MG 2.7.7.7 GO:0001882 ... P19821 35666775
    158758 7owf:A (1.91) BS04 MG 2.7.7.7 GO:0001882 ... P19821 35666775
    158759 7owy:A (1.55) BS01 FE2 1.16.3.1 GO:0006826 ... Q8N4E7 34343376
    158760 7owy:A (1.55) BS02 FE2 1.16.3.1 GO:0006826 ... Q8N4E7 34343376
    158761 7owy:A (1.55) BS03 FE2 1.16.3.1 GO:0006826 ... Q8N4E7 34343376
    158762 7owy:A (1.55) BS04 FE2 1.16.3.1 GO:0006826 ... Q8N4E7 34343376
    158763 7owz:A (2.6) BS03 ZN 2.4.2.29 GO:0000049 ... B8ZXI1 35815944
    158764 7owz:C (2.6) BS01 ZN 2.4.2.64 GO:0005515 ... Q9JMA2 35815944
    158765 7ox4:A (1.8) BS01 ZN N/A N/A N/A N/A
    158766 7ox4:A (1.8) BS02 ZN N/A N/A N/A N/A
    158767 7ox4:B (1.8) BS01 ZN N/A N/A N/A N/A
    158768 7ox4:B (1.8) BS02 ZN N/A N/A N/A N/A
    158769 7oxd:A (1.3) BS01 ZN N/A N/A N/A 34759315
    158770 7oxd:A (1.3) BS02 ZN N/A N/A N/A 34759315
    158771 7oxy:A (1.65) BS02 MG 3.4.-.- GO:0005524 ... A0LU48 34789727
    158772 7oxy:A (1.65) BS03 MG 3.4.-.- GO:0005524 ... A0LU48 34789727
    158773 7oxy:A (1.65) BS04 MG 3.4.-.- GO:0005524 ... A0LU48 34789727
    158774 7oy3:A (1.78) BS02 MG 3.4.-.- GO:0005524 ... A0LU48 34789727
    158775 7oy3:A (1.78) BS03 MG 3.4.-.- GO:0005524 ... A0LU48 34789727
    158776 7oy8:L (2.5) BS07 FE ? GO:0009772 ... Q2RQ25 34402504
    158777 7oy8:M (2.5) BS05 FE ? GO:0009772 ... Q2RQ26 34402504
    158778 7oya:A1 (3.2) BS02 MG ? GO:0002181 ... Q6P0V6 36653451
    158779 7oya:a2 (3.2) BS02 ZN ? GO:0003729 ... Q6P6E2 36653451
    158780 7oya:d2 (3.2) BS02 ZN ? GO:0001525 ... Q6Q419 36653451
    158781 7oya:g1 (3.2) BS02 ZN ? GO:0003735 ... Q7ZWJ7 36653451
    158782 7oya:j1 (3.2) BS03 ZN ? GO:0003735 ... Q6IQJ7 36653451
    158783 7oya:m1 (3.2) BS02 ZN ? GO:0003735 ... Q3B7P7 36653451
    158784 7oya:o1 (3.2) BS02 ZN ? GO:0003735 ... P61485 36653451
    158785 7oya:p1 (3.2) BS02 ZN ? GO:0003735 ... A7YY10 36653451
    158786 7oyb:A1 (2.4) BS02 MG ? GO:0002181 ... Q6P0V6 36653451
    158787 7oyb:A1 (2.4) BS03 MG ? GO:0002181 ... Q6P0V6 36653451
    158788 7oyb:B1 (2.4) BS02 MG ? GO:0003723 ... A0A2R8Q924 36653451
    158789 7oyb:a2 (2.4) BS02 ZN ? GO:0003729 ... Q6P6E2 36653451
    158790 7oyb:b1 (2.4) BS02 MG ? GO:0002181 ... Q6DGL4 36653451
    158791 7oyb:d2 (2.4) BS02 ZN ? GO:0001525 ... Q6Q419 36653451
    158792 7oyb:e1 (2.4) BS02 MG ? GO:0003735 ... Q24JV1 36653451
    158793 7oyb:g1 (2.4) BS02 ZN ? GO:0003735 ... Q7ZWJ7 36653451
    158794 7oyb:j1 (2.4) BS03 ZN ? GO:0003735 ... Q6IQJ7 36653451
    158795 7oyb:m1 (2.4) BS02 ZN ? GO:0003735 ... Q3B7P7 36653451
    158796 7oyb:o1 (2.4) BS02 ZN ? GO:0003735 ... P61485 36653451
    158797 7oyb:p1 (2.4) BS02 ZN ? GO:0003735 ... A7YY10 36653451
    158798 7oyc:A1 (2.4) BS02 MG N/A GO:0003723 ... N/A 36653451
    158799 7oyc:B1 (2.4) BS02 MG ? GO:0003723 ... Q7ZYR1 36653451
    158800 7oyc:a2 (2.4) BS02 ZN ? GO:0003729 ... Q6AZL7 36653451

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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