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BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    149201 7ca1:B (3.6) BS01 ZN 3.5.2.3 GO:0004151 ... P20051 34202294
    149202 7ca1:B (3.6) BS02 ZN 3.5.2.3 GO:0004151 ... P20051 34202294
    149203 7ca1:C (3.6) BS02 ZN 3.5.2.3 GO:0004151 ... P20051 34202294
    149204 7ca1:C (3.6) BS03 ZN 3.5.2.3 GO:0004151 ... P20051 34202294
    149205 7ca1:D (3.6) BS02 ZN 3.5.2.3 GO:0004151 ... P20051 34202294
    149206 7ca1:D (3.6) BS03 ZN 3.5.2.3 GO:0004151 ... P20051 34202294
    149207 7ca2:A (2.4) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 1932029
    149208 7cag:C (3.78) BS01 MG ? GO:0005524 ... A0R2C0 33127676
    149209 7cag:D (3.78) BS02 MG ? GO:0005524 ... A0R2C0 33127676
    149210 7cb4:A (2.04) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 33371681
    149211 7cb4:B (2.04) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 33371681
    149212 7cb4:B (2.04) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 33371681
    149213 7cba:A (2.901) BS01 ZN 3.6.1.- GO:0003676 ... A0A2D0TC04 N/A
    149214 7cba:A (2.901) BS02 ZN 3.6.1.- GO:0003676 ... A0A2D0TC04 N/A
    149215 7cba:A (2.901) BS03 CA 3.6.1.- GO:0003676 ... A0A2D0TC04 N/A
    149216 7cba:B (2.901) BS01 ZN 3.6.1.- GO:0003676 ... A0A2D0TC04 N/A
    149217 7cba:B (2.901) BS02 ZN 3.6.1.- GO:0003676 ... A0A2D0TC04 N/A
    149218 7cba:B (2.901) BS03 CA 3.6.1.- GO:0003676 ... A0A2D0TC04 N/A
    149219 7cbg:A (2.5) BS02 ZN 6.1.1.3 GO:0000166 ... V7II86 32980741
    149220 7cbg:B (2.5) BS02 ZN 6.1.1.3 GO:0000166 ... V7II86 32980741
    149221 7cbh:A (1.95) BS02 ZN 6.1.1.3 GO:0000166 ... V7II86 32980741
    149222 7cbh:B (1.95) BS01 ZN 6.1.1.3 GO:0000166 ... V7II86 32980741
    149223 7cbi:A (1.59) BS01 ZN 6.1.1.3 GO:0000166 ... V7II86 32980741
    149224 7cbi:B (1.59) BS01 ZN 6.1.1.3 GO:0000166 ... V7II86 32980741
    149225 7cbj:A (1.5) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 33218684
    149226 7cbj:B (1.5) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 33218684
    149227 7cbk:D (2.7) BS02 MG 3.4.21.37 GO:0004252 ... P08246 32657577
    149228 7cbq:A (1.59) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 33218684
    149229 7cbq:A (1.59) BS02 MG 3.1.4.53 GO:0004114 ... Q08499 33218684
    149230 7cbq:B (1.59) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 33218684
    149231 7cbr:A (1.8) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 33371681
    149232 7cbr:A (1.8) BS03 MG ? GO:0004067 ... A0A6I7U6Y2 33371681
    149233 7cbr:B (1.8) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 33371681
    149234 7cbr:B (1.8) BS03 MG ? GO:0004067 ... A0A6I7U6Y2 33371681
    149235 7cbs:A (2.39) BS01 MG N/A N/A N/A N/A
    149236 7cbs:C (2.39) BS01 MG N/A N/A N/A N/A
    149237 7cbs:F (2.39) BS01 MG N/A N/A N/A N/A
    149238 7cbs:L (2.39) BS01 MG N/A N/A N/A N/A
    149239 7cbu:A (2.25) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 33371681
    149240 7cbu:B (2.25) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 33371681
    149241 7cbu:B (2.25) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 33371681
    149242 7cbw:A (1.978) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 33371681
    149243 7cbw:A (1.978) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 33371681
    149244 7cbw:B (1.978) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 33371681
    149245 7cbw:B (1.978) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 33371681
    149246 7cbz:A (2.61) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 34081857
    149247 7cbz:C (2.61) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 34081857
    149248 7cbz:D (2.61) BS02 MG ? GO:0000226 ... P02554 34081857
    149249 7cbz:F (2.61) BS01 MG N/A GO:0036211 ... N/A 34081857
    149250 7cci:A (1.65) BS01 MG ? GO:0000160 ... Q6TA00 34113820
    149251 7cci:B (1.65) BS01 MG ? GO:0000160 ... Q6TA00 34113820
    149252 7cd4:A (2.1) BS01 ZN ? GO:0005829 ... D4G3D4 33590041
    149253 7cd4:C (2.1) BS01 ZN ? GO:0005829 ... D4G3D4 33590041
    149254 7cda:A (2.659) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 35762925
    149255 7cda:C (2.659) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 35762925
    149256 7cda:D (2.659) BS03 MG ? GO:0000226 ... P02554 35762925
    149257 7cdh:X (2.6) BS01 ZN N/A GO:0008798 ... N/A 33392259
    149258 7cdh:X (2.6) BS02 ZN N/A GO:0008798 ... N/A 33392259
    149259 7cdl:A (1.85) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149260 7cdl:B (1.85) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149261 7cdl:C (1.85) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149262 7cdl:D (1.85) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149263 7cdl:G (1.85) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149264 7cdl:H (1.85) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149265 7cdl:M (1.85) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149266 7cdl:N (1.85) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149267 7cdy:A (1.329) BS01 CA N/A N/A N/A N/A
    149268 7cdy:B (1.329) BS01 CA N/A N/A N/A N/A
    149269 7ce4:A (1.5) BS01 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 33520373
    149270 7ce5:A (1.8) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149271 7ce5:B (1.8) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149272 7ce5:C (1.8) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149273 7ce5:D (1.8) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149274 7ce5:G (1.8) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149275 7ce5:H (1.8) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149276 7ce5:M (1.8) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149277 7ce5:N (1.8) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149278 7ce6:A (2.695) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 35762925
    149279 7ce6:C (2.695) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 35762925
    149280 7ce6:D (2.695) BS03 MG ? GO:0000226 ... P02554 35762925
    149281 7ce8:A (2.725) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 35762925
    149282 7ce8:C (2.725) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 35762925
    149283 7ce9:A (2.2) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149284 7ce9:B (2.2) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149285 7ce9:C (2.2) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149286 7ce9:D (2.2) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149287 7ce9:G (2.2) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149288 7ce9:H (2.2) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149289 7ce9:M (2.2) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149290 7ce9:N (2.2) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149291 7ceb:A (2.89) BS01 CA ? GO:0007155 ... P23229 34188035
    149292 7ceb:A (2.89) BS02 CA ? GO:0007155 ... P23229 34188035
    149293 7ceb:A (2.89) BS03 CA ? GO:0007155 ... P23229 34188035
    149294 7ceb:B (2.89) BS01 CA ? N/A P05556 34188035
    149295 7ceb:B (2.89) BS02 MG ? N/A P05556 34188035
    149296 7cec:A (3.9) BS01 CA ? GO:0007155 ... P23229 34188035
    149297 7cec:A (3.9) BS02 CA ? GO:0007155 ... P23229 34188035
    149298 7cec:A (3.9) BS03 CA ? GO:0007155 ... P23229 34188035
    149299 7cec:B (3.9) BS01 MN ? N/A P05556 34188035
    149300 7cec:B (3.9) BS02 MN ? N/A P05556 34188035
    149301 7cec:B (3.9) BS03 MN ? N/A P05556 34188035
    149302 7cec:C (3.9) BS01 CA ? GO:0007155 ... O15230 34188035
    149303 7cef:A (1.6) BS01 CA 3.1.1.74 N/A W0TJ64 32882044
    149304 7cef:A (1.6) BS02 ZN 3.1.1.74 N/A W0TJ64 32882044
    149305 7cef:A (1.6) BS03 ZN 3.1.1.74 N/A W0TJ64 32882044
    149306 7cef:B (1.6) BS01 ZN 3.1.1.74 N/A W0TJ64 32882044
    149307 7cef:B (1.6) BS02 ZN 3.1.1.74 N/A W0TJ64 32882044
    149308 7ceh:A (1.09) BS01 CA 3.1.1.74 N/A W0TJ64 32882044
    149309 7ceh:A (1.09) BS02 CA 3.1.1.74 N/A W0TJ64 32882044
    149310 7cei:B (2.3) BS01 ZN 3.1.-.- GO:0004519 ... Q47112 10368275
    149311 7cek:A (2.696) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 35762925
    149312 7cek:C (2.696) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 35762925
    149313 7cek:D (2.696) BS01 CA ? GO:0000226 ... P02554 35762925
    149314 7cel:A (1.9) BS09 CO 3.2.1.91 GO:0004553 ... P62694 9466911
    149315 7cel:A (1.9) BS10 CO 3.2.1.91 GO:0004553 ... P62694 9466911
    149316 7cen:A (2.35) BS02 MG 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    149317 7cf6:A (2.75) BS02 ZN N/A GO:0008798 ... N/A 33392259
    149318 7cf6:A (2.75) BS03 ZN N/A GO:0008798 ... N/A 33392259
    149319 7cf6:B (2.75) BS02 ZN N/A GO:0008798 ... N/A 33392259
    149320 7cf6:B (2.75) BS03 ZN N/A GO:0008798 ... N/A 33392259
    149321 7cf6:C (2.75) BS02 ZN N/A GO:0008798 ... N/A 33392259
    149322 7cf6:C (2.75) BS03 ZN N/A GO:0008798 ... N/A 33392259
    149323 7cf6:D (2.75) BS02 ZN N/A GO:0008798 ... N/A 33392259
    149324 7cf6:D (2.75) BS03 ZN N/A GO:0008798 ... N/A 33392259
    149325 7cf9:A (4.7) BS01 CA ? GO:0003151 ... P11716 32807966
    149326 7cf9:A (4.7) BS02 ZN ? GO:0003151 ... P11716 32807966
    149327 7cf9:C (4.7) BS01 CA ? GO:0003151 ... P11716 32807966
    149328 7cf9:C (4.7) BS02 ZN ? GO:0003151 ... P11716 32807966
    149329 7cf9:E (4.7) BS01 CA ? GO:0003151 ... P11716 32807966
    149330 7cf9:E (4.7) BS02 ZN ? GO:0003151 ... P11716 32807966
    149331 7cf9:G (4.7) BS01 CA ? GO:0003151 ... P11716 32807966
    149332 7cf9:G (4.7) BS02 ZN ? GO:0003151 ... P11716 32807966
    149333 7cff:A (2.0) BS01 ZN ? N/A A0A109QFA5 33568487
    149334 7cff:A (2.0) BS02 MG ? N/A A0A109QFA5 33568487
    149335 7cfg:A (3.2) BS01 ZN ? N/A A0A109QFA5 33568487
    149336 7cfg:A (3.2) BS02 MG ? N/A A0A109QFA5 33568487
    149337 7cfi:A (2.45) BS02 MG ? N/A A0A109QFA5 33568487
    149338 7cfw:A (1.31) BS01 CA 2.7.13.3 GO:0000160 ... Q9I3B1 32939285
    149339 7cfx:A (2.5) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149340 7cfx:B (2.5) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149341 7cfx:C (2.5) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149342 7cfx:D (2.5) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149343 7cfx:G (2.5) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149344 7cfx:H (2.5) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149345 7cfx:M (2.5) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149346 7cfx:N (2.5) BS01 CA ? GO:0005509 ... Q60AR6 33629832
    149347 7cgt:A (3.0) BS01 CA 2.4.1.19 GO:0003824 ... P30920 9738912
    149348 7cgt:A (3.0) BS02 CA 2.4.1.19 GO:0003824 ... P30920 9738912
    149349 7cgu:A (2.4) BS01 ZN ? GO:0005737 ... A0A8A5L0G9 N/A
    149350 7cgy:C (3.2) BS03 CA ? GO:0000150 ... Q14565 33446654
    149351 7cgz:A (1.94) BS01 CA N/A N/A N/A N/A
    149352 7cgz:B (1.94) BS01 CA N/A N/A N/A N/A
    149353 7ch1:A (2.6) BS03 NA ? GO:0000139 ... Q7LBE3 32818062
    149354 7ch1:B (2.6) BS03 NA ? GO:0000139 ... Q7LBE3 32818062
    149355 7ch3:A (3.61) BS01 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149356 7ch3:B (3.61) BS01 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149357 7ch3:B (3.61) BS02 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149358 7ch3:C (3.61) BS01 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149359 7ch3:C (3.61) BS02 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149360 7ch3:D (3.61) BS01 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149361 7ch3:D (3.61) BS02 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149362 7ch3:E (3.61) BS01 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149363 7ch3:E (3.61) BS02 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149364 7ch3:F (3.61) BS01 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149365 7ch3:F (3.61) BS02 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149366 7ch3:G (3.61) BS01 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149367 7ch3:G (3.61) BS02 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149368 7ch3:H (3.61) BS01 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149369 7ch3:I (3.61) BS01 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149370 7ch3:I (3.61) BS02 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149371 7ch3:J (3.61) BS01 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149372 7ch3:J (3.61) BS02 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149373 7ch3:K (3.61) BS01 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149374 7ch3:L (3.61) BS01 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149375 7ch3:L (3.61) BS02 MN 5.3.1.4 GO:0005737 ... Q9WYB3 N/A
    149376 7chi:A (2.502) BS01 FE 1.13.11.20 GO:0005506 ... Q9LXT4 33207269
    149377 7chj:A (2.44) BS01 FE 1.13.11.20 GO:0005506 ... Q9SJI9 33207269
    149378 7chj:B (2.44) BS01 FE 1.13.11.20 GO:0005506 ... Q9SJI9 33207269
    149379 7chl:A (3.4) BS01 MN 5.3.1.4 GO:0005737 ... K0IGW6
    P08202
    Q5KYP7
    N/A
    149380 7chl:B (3.4) BS01 MN 5.3.1.4 GO:0005737 ... K0IGW6
    P08202
    Q5KYP7
    N/A
    149381 7chl:C (3.4) BS01 MN 5.3.1.4 GO:0005737 ... K0IGW6
    P08202
    Q5KYP7
    N/A
    149382 7chl:D (3.4) BS01 MN 5.3.1.4 GO:0005737 ... K0IGW6
    P08202
    Q5KYP7
    N/A
    149383 7chl:E (3.4) BS01 MN 5.3.1.4 GO:0005737 ... K0IGW6
    P08202
    Q5KYP7
    N/A
    149384 7chl:F (3.4) BS01 MN 5.3.1.4 GO:0005737 ... K0IGW6
    P08202
    Q5KYP7
    N/A
    149385 7chl:G (3.4) BS01 MN 5.3.1.4 GO:0005737 ... K0IGW6
    P08202
    Q5KYP7
    N/A
    149386 7chl:H (3.4) BS01 MN 5.3.1.4 GO:0005737 ... K0IGW6
    P08202
    Q5KYP7
    N/A
    149387 7chl:I (3.4) BS01 MN 5.3.1.4 GO:0005737 ... K0IGW6
    P08202
    Q5KYP7
    N/A
    149388 7chl:J (3.4) BS01 MN 5.3.1.4 GO:0005737 ... K0IGW6
    P08202
    Q5KYP7
    N/A
    149389 7chl:K (3.4) BS01 MN 5.3.1.4 GO:0005737 ... K0IGW6
    P08202
    Q5KYP7
    N/A
    149390 7chl:L (3.4) BS01 MN 5.3.1.4 GO:0005737 ... K0IGW6
    P08202
    Q5KYP7
    N/A
    149391 7cht:A (2.4) BS02 MG 2.7.12.1 GO:0004672 ... P33981 33942608
    149392 7chv:A (2.174) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 34386329
    149393 7chv:A (2.174) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 34386329
    149394 7chw:D (3.58) BS03 MG 2.7.7.6 GO:0000287 ... P0A8T7 N/A
    149395 7chw:D (3.58) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 N/A
    149396 7ci4:A (2.0) BS02 ZN 3.5.1.108 GO:0006796 ... P47205 33210531
    149397 7ci4:A (2.0) BS03 MG 3.5.1.108 GO:0006796 ... P47205 33210531
    149398 7ci4:B (2.0) BS02 ZN 3.5.1.108 GO:0006796 ... P47205 33210531
    149399 7ci4:B (2.0) BS03 MG 3.5.1.108 GO:0006796 ... P47205 33210531
    149400 7ci5:A (2.5) BS02 ZN 3.5.1.108 GO:0006796 ... P47205 33210531

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218