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BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    147201 7a26:HHH (2.98) BS01 CA ? GO:0046872 ... A0A1Q4NVM5 33742033
    147202 7a28:A (1.89) BS02 ZN 3.1.4.- GO:0004114 ... Q8WQX9 N/A
    147203 7a28:B (1.89) BS02 ZN 3.1.4.- GO:0004114 ... Q8WQX9 N/A
    147204 7a2f:A (2.0) BS01 ZN 3.1.4.- GO:0004114 ... Q8WQX9 N/A
    147205 7a2f:B (2.0) BS01 ZN 3.1.4.- GO:0004114 ... Q8WQX9 N/A
    147206 7a2g:A (4.1) BS01 FE 1.14.16.2 GO:0004497 ... P07101 35013193
    147207 7a2g:B (4.1) BS01 FE 1.14.16.2 GO:0004497 ... P07101 35013193
    147208 7a2g:C (4.1) BS01 FE 1.14.16.2 GO:0004497 ... P07101 35013193
    147209 7a2g:D (4.1) BS01 FE 1.14.16.2 GO:0004497 ... P07101 35013193
    147210 7a3n:A (2.1) BS01 CA 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0046983 ... A0A024B7W1 34852239
    147211 7a3v:A (1.7) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 34081441
    147212 7a3x:A (1.85) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 34081441
    147213 7a4k:A (1.68) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 34081441
    147214 7a4m:A (1.22) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 33087931
    147215 7a4x:A (2.05) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 34081441
    147216 7a5e:A (1.904) BS02 MG ? GO:0003777 ... P46873 33513284
    147217 7a5e:B (1.904) BS02 MG ? GO:0003777 ... P46873 33513284
    147218 7a5f:03 (4.4) BS02 ZN ? GO:0003723 ... Q9BYC8 33243891
    147219 7a5f:43 (4.4) BS02 ZN ? GO:0003735 ... Q9P0J6 33243891
    147220 7a5f:B6 (4.4) BS02 ZN ? GO:0003735 ... Q9Y399 33243891
    147221 7a5f:P6 (4.4) BS02 ZN ? GO:0003735 ... Q9Y3D5 33243891
    147222 7a5f:T6 (4.4) BS02 ZN ? GO:0003735 ... P82663 33243891
    147223 7a5f:n (4.4) BS03 MG ? GO:0000049 ... P27150 33243891
    147224 7a5f:r3 (4.4) BS02 ZN ? GO:0003735 ... Q9NVS2 33243891
    147225 7a5g:03 (4.33) BS02 ZN ? GO:0003723 ... Q9BYC8 33243891
    147226 7a5g:43 (4.33) BS02 ZN ? GO:0003735 ... Q9P0J6 33243891
    147227 7a5g:B6 (4.33) BS02 ZN ? GO:0003735 ... Q9Y399 33243891
    147228 7a5g:O6 (4.33) BS02 ZN ? GO:0003735 ... Q9Y676 33243891
    147229 7a5g:n (4.33) BS03 MG ? GO:0000049 ... P27150 33243891
    147230 7a5g:r3 (4.33) BS02 ZN ? GO:0003735 ... Q9NVS2 33243891
    147231 7a5h:0 (3.3) BS02 ZN ? GO:0003723 ... Q9BYC8 33243891
    147232 7a5h:F (3.3) BS02 MG ? GO:0003723 ... Q9BYD3 33243891
    147233 7a5i:03 (3.7) BS02 ZN ? GO:0003723 ... Q9BYC8 33243891
    147234 7a5i:43 (3.7) BS02 ZN ? GO:0003735 ... Q9P0J6 33243891
    147235 7a5i:B6 (3.7) BS02 ZN ? GO:0003735 ... Q9Y399 33243891
    147236 7a5j:0 (3.1) BS02 ZN ? GO:0003723 ... Q9BYC8 33243891
    147237 7a5j:4 (3.1) BS02 ZN ? GO:0003735 ... Q9P0J6 33243891
    147238 7a5k:03 (3.7) BS02 ZN ? GO:0003723 ... Q9BYC8 33243891
    147239 7a5k:43 (3.7) BS02 ZN ? GO:0003735 ... Q9P0J6 33243891
    147240 7a5k:B6 (3.7) BS02 ZN ? GO:0003735 ... Q9Y399 33243891
    147241 7a5k:P6 (3.7) BS02 ZN ? GO:0003735 ... Q9Y3D5 33243891
    147242 7a5k:T6 (3.7) BS02 ZN ? GO:0003735 ... P82663 33243891
    147243 7a5k:r1 (3.7) BS03 MG ? GO:0003723 ... Q96RP9 33243891
    147244 7a5o:A (2.95) BS01 CA ? N/A Q02817 33031746
    147245 7a5o:A (2.95) BS02 CA ? N/A Q02817 33031746
    147246 7a5o:A (2.95) BS03 CA ? N/A Q02817 33031746
    147247 7a5o:A (2.95) BS04 CA ? N/A Q02817 33031746
    147248 7a5o:A (2.95) BS05 CA ? N/A Q02817 33031746
    147249 7a5o:B (2.95) BS01 CA ? N/A Q02817 33031746
    147250 7a5o:B (2.95) BS02 CA ? N/A Q02817 33031746
    147251 7a5o:C (2.95) BS01 CA ? N/A Q02817 33031746
    147252 7a5o:C (2.95) BS02 CA ? N/A Q02817 33031746
    147253 7a5o:C (2.95) BS03 CA ? N/A Q02817 33031746
    147254 7a5o:D (2.95) BS01 CA ? N/A Q02817 33031746
    147255 7a5o:D (2.95) BS02 CA ? N/A Q02817 33031746
    147256 7a5o:D (2.95) BS03 CA ? N/A Q02817 33031746
    147257 7a5o:E (2.95) BS01 CA ? N/A Q02817 33031746
    147258 7a5o:E (2.95) BS02 CA ? N/A Q02817 33031746
    147259 7a5o:E (2.95) BS03 CA ? N/A Q02817 33031746
    147260 7a5o:E (2.95) BS04 CA ? N/A Q02817 33031746
    147261 7a5o:E (2.95) BS05 CA ? N/A Q02817 33031746
    147262 7a5o:F (2.95) BS01 CA ? N/A Q02817 33031746
    147263 7a5o:F (2.95) BS02 CA ? N/A Q02817 33031746
    147264 7a5o:G (2.95) BS01 CA ? N/A Q02817 33031746
    147265 7a5o:G (2.95) BS02 CA ? N/A Q02817 33031746
    147266 7a5o:G (2.95) BS03 CA ? N/A Q02817 33031746
    147267 7a5o:H (2.95) BS01 CA ? N/A Q02817 33031746
    147268 7a5o:H (2.95) BS02 CA ? N/A Q02817 33031746
    147269 7a5o:H (2.95) BS03 CA ? N/A Q02817 33031746
    147270 7a5o:I (2.95) BS01 CA ? N/A Q02817 33031746
    147271 7a5o:I (2.95) BS02 CA ? N/A Q02817 33031746
    147272 7a5o:J (2.95) BS01 CA ? N/A Q02817 33031746
    147273 7a5o:J (2.95) BS02 CA ? N/A Q02817 33031746
    147274 7a5x:A (1.94) BS02 CA 3.2.1.18 GO:0004308 ... P62575 33150981
    147275 7a5x:B (1.94) BS02 CA 3.2.1.18 GO:0004308 ... P62575 33150981
    147276 7a5y:A (2.29) BS01 FE 3.1.5.- N/A Q9Y3Z3 33988981
    147277 7a5y:A (2.29) BS02 MG 3.1.5.- N/A Q9Y3Z3 33988981
    147278 7a5y:B (2.29) BS04 FE 3.1.5.- N/A Q9Y3Z3 33988981
    147279 7a5y:B (2.29) BS05 MG 3.1.5.- N/A Q9Y3Z3 33988981
    147280 7a5y:C (2.29) BS04 FE 3.1.5.- N/A Q9Y3Z3 33988981
    147281 7a5y:C (2.29) BS05 MG 3.1.5.- N/A Q9Y3Z3 33988981
    147282 7a5y:D (2.29) BS06 FE 3.1.5.- N/A Q9Y3Z3 33988981
    147283 7a5y:D (2.29) BS07 MG 3.1.5.- N/A Q9Y3Z3 33988981
    147284 7a5y:E (2.29) BS01 FE 3.1.5.- N/A Q9Y3Z3 33988981
    147285 7a5y:E (2.29) BS02 MG 3.1.5.- N/A Q9Y3Z3 33988981
    147286 7a5y:F (2.29) BS04 FE 3.1.5.- N/A Q9Y3Z3 33988981
    147287 7a5y:F (2.29) BS05 MG 3.1.5.- N/A Q9Y3Z3 33988981
    147288 7a5y:G (2.29) BS04 FE 3.1.5.- N/A Q9Y3Z3 33988981
    147289 7a5y:G (2.29) BS05 MG 3.1.5.- N/A Q9Y3Z3 33988981
    147290 7a5y:H (2.29) BS06 FE 3.1.5.- N/A Q9Y3Z3 33988981
    147291 7a5y:H (2.29) BS07 MG 3.1.5.- N/A Q9Y3Z3 33988981
    147292 7a5z:A (1.29) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 33618159
    147293 7a5z:A (1.29) BS03 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 33618159
    147294 7a5z:A (1.29) BS04 MG 3.5.2.6 GO:0016787 ... Q9K2N0 33618159
    147295 7a60:A (1.47) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 33618159
    147296 7a60:A (1.47) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 33618159
    147297 7a60:B (1.47) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 33618159
    147298 7a60:B (1.47) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 33618159
    147299 7a63:A (1.57) BS01 ZN 3.5.2.6 GO:0008270 ... P52700 33618159
    147300 7a63:A (1.57) BS02 ZN 3.5.2.6 GO:0008270 ... P52700 33618159
    147301 7a6d:A (1.59) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 34081441
    147302 7a6h:A (3.3) BS01 ZN 2.7.7.6 GO:0000287 ... O14802 33558764
    147303 7a6h:A (3.3) BS02 ZN 2.7.7.6 GO:0000287 ... O14802 33558764
    147304 7a6h:A (3.3) BS03 MG 2.7.7.6 GO:0000287 ... O14802 33558764
    147305 7a6h:B (3.3) BS01 ZN 2.7.7.6 GO:0000428 ... Q9NW08 33558764
    147306 7a6h:I (3.3) BS01 ZN ? GO:0000428 ... Q9Y2Y1 33558764
    147307 7a6h:I (3.3) BS02 ZN ? GO:0000428 ... Q9Y2Y1 33558764
    147308 7a6h:J (3.3) BS01 ZN ? GO:0000428 ... P62875 33558764
    147309 7a6h:L (3.3) BS01 ZN ? GO:0000428 ... P53803 33558764
    147310 7a6v:A (2.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 34882858
    147311 7a73:A (1.14) BS01 CA 5.2.1.8 GO:0000413 ... Q8YM80 N/A
    147312 7a7e:A (2.8) BS01 MG 2.7.7.65 N/A Q9I4L5 33418960
    147313 7a7e:B (2.8) BS01 MG 2.7.7.65 N/A Q9I4L5 33418960
    147314 7a7e:C (2.8) BS01 MG 2.7.7.65 N/A Q9I4L5 33418960
    147315 7a8q:A (2.24) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147316 7a8q:B (2.24) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147317 7a8q:C (2.24) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147318 7a8q:D (2.24) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147319 7a8r:A (2.31) BS01 ZN 5.6.2.4 GO:0003676 ... A0JN36 34496242
    147320 7a8r:B (2.31) BS01 ZN 5.6.2.4 GO:0003676 ... A0JN36 34496242
    147321 7a8v:A (1.94961) BS03 CU 3.2.1.4 N/A A0A482A9N4 N/A
    147322 7a91:D (3.6) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 32942285
    147323 7a92:D (4.2) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 32942285
    147324 7a94:D (3.9) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 32942285
    147325 7a9a:A (1.17) BS01 FE ? GO:0005506 ... I6YFL7 33618255
    147326 7a9a:A (1.17) BS02 ZN ? GO:0005506 ... I6YFL7 33618255
    147327 7a9a:B (1.17) BS01 FE ? GO:0005506 ... I6YFL7 33618255
    147328 7a9a:B (1.17) BS02 ZN ? GO:0005506 ... I6YFL7 33618255
    147329 7a9a:C (1.17) BS01 FE ? GO:0005506 ... I6YFL7 33618255
    147330 7a9a:C (1.17) BS02 ZN ? GO:0005506 ... I6YFL7 33618255
    147331 7a9a:D (1.17) BS01 FE ? GO:0005506 ... I6YFL7 33618255
    147332 7a9a:D (1.17) BS02 ZN ? GO:0005506 ... I6YFL7 33618255
    147333 7a9a:E (1.17) BS01 FE ? GO:0005506 ... I6YFL7 33618255
    147334 7a9a:E (1.17) BS02 ZN ? GO:0005506 ... I6YFL7 33618255
    147335 7a9a:F (1.17) BS01 FE ? GO:0005506 ... I6YFL7 33618255
    147336 7a9a:F (1.17) BS02 ZN ? GO:0005506 ... I6YFL7 33618255
    147337 7a9a:G (1.17) BS01 FE ? GO:0005506 ... I6YFL7 33618255
    147338 7a9a:G (1.17) BS02 ZN ? GO:0005506 ... I6YFL7 33618255
    147339 7a9a:H (1.17) BS01 FE ? GO:0005506 ... I6YFL7 33618255
    147340 7a9a:H (1.17) BS02 ZN ? GO:0005506 ... I6YFL7 33618255
    147341 7a9e:A (1.76) BS01 ZN 2.4.2.29 GO:0002099 ... P28720 34081441
    147342 7a9g:AAA (1.9) BS02 MG 2.2.1.7 GO:0003824 ... P9WNS3 35508530
    147343 7a9g:BBB (1.9) BS02 MG 2.2.1.7 GO:0003824 ... P9WNS3 35508530
    147344 7a9h:AAA (1.849) BS01 MG 2.2.1.7 GO:0003824 ... P9WNS3 35508530
    147345 7a9h:BBB (1.849) BS01 MG 2.2.1.7 GO:0003824 ... P9WNS3 35508530
    147346 7a9v:A (2.17) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147347 7a9v:B (2.17) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147348 7a9v:C (2.17) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147349 7a9v:D (2.17) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147350 7aag:A (1.79) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147351 7aag:A (1.79) BS03 MG 3.1.4.53 GO:0004114 ... Q08499 N/A
    147352 7aag:B (1.79) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147353 7aag:C (1.79) BS02 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147354 7aag:D (1.79) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147355 7aap:A (2.5) BS04 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0003723 ... P0DTD1 33526596
    147356 7aap:A (2.5) BS05 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0003723 ... P0DTD1 33526596
    147357 7aap:A (2.5) BS06 MG 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0003723 ... P0DTD1 33526596
    147358 7aas:A (1.8) BS01 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147359 7aas:A (1.8) BS02 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147360 7aas:B (1.8) BS01 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147361 7aas:B (1.8) BS02 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147362 7aas:C (1.8) BS01 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147363 7aas:C (1.8) BS02 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147364 7aas:D (1.8) BS01 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147365 7aas:D (1.8) BS02 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147366 7aas:E (1.8) BS01 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147367 7aas:E (1.8) BS02 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147368 7aas:F (1.8) BS01 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147369 7aas:F (1.8) BS02 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147370 7aau:A (2.301) BS01 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147371 7aau:A (2.301) BS02 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147372 7aau:B (2.301) BS01 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147373 7aau:B (2.301) BS02 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147374 7aau:C (2.301) BS01 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147375 7aau:C (2.301) BS02 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147376 7aau:D (2.301) BS01 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147377 7aau:D (2.301) BS02 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147378 7aau:E (2.301) BS01 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147379 7aau:E (2.301) BS02 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147380 7aau:F (2.301) BS01 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147381 7aau:F (2.301) BS02 ZN 1.1.1.284 GO:0000166 ... A0A2K3D6R4 33316743
    147382 7ab9:A (2.19) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147383 7ab9:B (2.19) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147384 7ab9:C (2.19) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147385 7ab9:D (2.19) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147386 7abd:A (2.41) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147387 7abd:B (2.41) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147388 7abd:C (2.41) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147389 7abd:D (2.41) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147390 7abe:A (1.83) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147391 7abe:B (1.83) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147392 7abe:C (1.83) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147393 7abe:D (1.83) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147394 7abj:A (2.11) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147395 7abj:B (2.11) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147396 7abj:C (2.11) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147397 7abj:D (2.11) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 N/A
    147398 7abn:A (1.65) BS01 MN 4.1.1.93 GO:0005737 ... Q9I6N5 33763291
    147399 7abn:D (1.65) BS01 MN 4.1.1.93 GO:0005737 ... Q9I6N5 33763291
    147400 7abn:H (1.65) BS01 MN 4.1.1.93 GO:0005737 ... Q9I6N5 33763291

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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