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BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    117201 6aej:A (2.8) BS02 ZN 1.14.11.-
    1.14.11.53    		 GO:0006307 ... Q9C0B1 30996080
    117202 6aek:A (1.8) BS03 ZN 3.1.4.1
    3.6.1.9    		 GO:0003676 ... P06802 30356045
    117203 6aek:A (1.8) BS04 ZN 3.1.4.1
    3.6.1.9    		 GO:0003676 ... P06802 30356045
    117204 6aek:A (1.8) BS05 CA 3.1.4.1
    3.6.1.9    		 GO:0003676 ... P06802 30356045
    117205 6ael:A (1.9) BS02 ZN 3.1.4.1
    3.6.1.9    		 GO:0003676 ... P06802 30356045
    117206 6ael:A (1.9) BS03 ZN 3.1.4.1
    3.6.1.9    		 GO:0003676 ... P06802 30356045
    117207 6ael:A (1.9) BS04 CA 3.1.4.1
    3.6.1.9    		 GO:0003676 ... P06802 30356045
    117208 6aem:A (1.272) BS01 CA ? GO:0046872 ... A0A383R4X5 30268503
    117209 6aem:A (1.272) BS02 ZN ? GO:0046872 ... A0A383R4X5 30268503
    117210 6aem:B (1.272) BS01 CA ? GO:0046872 ... A0A383R4X5 30268503
    117211 6aem:B (1.272) BS02 ZN ? GO:0046872 ... A0A383R4X5 30268503
    117212 6afs:A (2.299) BS03 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117213 6afs:A (2.299) BS04 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117214 6afs:A (2.299) BS05 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117215 6afs:A (2.299) BS06 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117216 6afs:B (2.299) BS03 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117217 6afs:B (2.299) BS04 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117218 6afs:B (2.299) BS05 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117219 6afs:B (2.299) BS06 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117220 6aft:A (2.492) BS03 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117221 6aft:A (2.492) BS04 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117222 6aft:A (2.492) BS05 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117223 6aft:A (2.492) BS06 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117224 6aft:B (2.492) BS03 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117225 6aft:B (2.492) BS04 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117226 6aft:B (2.492) BS05 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117227 6aft:B (2.492) BS06 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117228 6afu:A (2.798) BS03 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117229 6afu:A (2.798) BS04 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117230 6afu:A (2.798) BS05 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117231 6afu:A (2.798) BS06 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117232 6afu:B (2.798) BS03 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117233 6afu:B (2.798) BS04 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117234 6afu:B (2.798) BS05 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117235 6afu:B (2.798) BS06 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117236 6afu:B (2.798) BS07 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117237 6afv:A (2.701) BS03 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117238 6afv:A (2.701) BS04 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117239 6afv:B (2.701) BS02 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117240 6afv:B (2.701) BS03 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117241 6afv:B (2.701) BS04 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117242 6afv:B (2.701) BS05 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117243 6afw:A (2.185) BS03 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117244 6afw:A (2.185) BS04 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117245 6afw:A (2.185) BS05 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117246 6afw:A (2.185) BS06 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117247 6afw:B (2.185) BS03 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117248 6afw:B (2.185) BS04 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117249 6afw:B (2.185) BS05 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117250 6afw:B (2.185) BS06 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117251 6afx:A (2.301) BS03 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117252 6afx:A (2.301) BS04 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117253 6afx:A (2.301) BS05 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117254 6afx:A (2.301) BS06 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117255 6afx:B (2.301) BS03 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117256 6afx:B (2.301) BS04 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117257 6afx:B (2.301) BS05 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117258 6afx:B (2.301) BS06 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117259 6afy:A (2.401) BS03 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117260 6afy:A (2.401) BS04 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117261 6afy:A (2.401) BS05 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117262 6afy:A (2.401) BS06 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117263 6afy:B (2.401) BS03 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117264 6afy:B (2.401) BS04 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117265 6afy:B (2.401) BS05 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117266 6afy:B (2.401) BS06 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117267 6afz:A (2.483) BS03 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117268 6afz:A (2.483) BS04 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117269 6afz:A (2.483) BS05 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117270 6afz:A (2.483) BS06 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117271 6afz:B (2.483) BS03 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117272 6afz:B (2.483) BS04 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117273 6afz:B (2.483) BS05 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117274 6afz:B (2.483) BS06 MG 7.1.3.1 GO:0004427 ... P21616 30878480
    117275 6ag0:A (2.2) BS12 CA 3.2.1.1 GO:0004553 ... Q9KWY6 31325505
    117276 6ag0:A (2.2) BS13 CA 3.2.1.1 GO:0004553 ... Q9KWY6 31325505
    117277 6ag0:A (2.2) BS14 CA 3.2.1.1 GO:0004553 ... Q9KWY6 31325505
    117278 6ag0:A (2.2) BS15 CA 3.2.1.1 GO:0004553 ... Q9KWY6 31325505
    117279 6ag0:C (2.2) BS10 CA 3.2.1.1 GO:0004553 ... Q9KWY6 31325505
    117280 6ag0:C (2.2) BS11 CA 3.2.1.1 GO:0004553 ... Q9KWY6 31325505
    117281 6ag0:C (2.2) BS12 CA 3.2.1.1 GO:0004553 ... Q9KWY6 31325505
    117282 6ag0:C (2.2) BS13 CA 3.2.1.1 GO:0004553 ... Q9KWY6 31325505
    117283 6ag4:A (2.256) BS02 CA 2.3.1.255
    2.3.1.258    		 GO:0004596 ... Q980R9 32780067
    117284 6ag5:A (2.32) BS02 CA 2.3.1.255
    2.3.1.258    		 GO:0004596 ... Q980R9 32780067
    117285 6agb:K (3.48) BS02 ZN 3.1.26.5 GO:0001682 ... P40571 30262633
    117286 6agg:Z (2.706) BS03 MG 6.3.4.22 GO:0002101 ... O28025 30121296
    117287 6agg:Z (2.706) BS04 MG 6.3.4.22 GO:0002101 ... O28025 30121296
    117288 6agi:A (2.799) BS01 CA ? GO:0005509 ... Q86XE3 30699349
    117289 6agi:A (2.799) BS02 CA ? GO:0005509 ... Q86XE3 30699349
    117290 6agi:B (2.799) BS01 CA ? GO:0005509 ... Q86XE3 30699349
    117291 6agi:B (2.799) BS02 CA ? GO:0005509 ... Q86XE3 30699349
    117292 6agk:A (2.8) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 31860298
    117293 6agk:C (2.8) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 31860298
    117294 6ago:A (3.103) BS02 ZN 2.1.1.359
    2.1.1.367    		 GO:0005634 ... Q9NR48 30827841
    117295 6ago:A (3.103) BS03 ZN 2.1.1.359
    2.1.1.367    		 GO:0005634 ... Q9NR48 30827841
    117296 6ago:A (3.103) BS04 ZN 2.1.1.359
    2.1.1.367    		 GO:0005634 ... Q9NR48 30827841
    117297 6ago:B (3.103) BS01 ZN 2.1.1.359
    2.1.1.367    		 GO:0005634 ... Q9NR48 30827841
    117298 6ago:B (3.103) BS02 ZN 2.1.1.359
    2.1.1.367    		 GO:0005634 ... Q9NR48 30827841
    117299 6ago:B (3.103) BS03 ZN 2.1.1.359
    2.1.1.367    		 GO:0005634 ... Q9NR48 30827841
    117300 6ah3:K (3.48) BS03 ZN 3.1.26.5 GO:0001682 ... P40571 30262633
    117301 6ah7:A (2.38) BS01 MN N/A GO:0016795 ... N/A 32515491
    117302 6ah7:A (2.38) BS02 MN N/A GO:0016795 ... N/A 32515491
    117303 6ah7:B (2.38) BS01 MN N/A GO:0016795 ... N/A 32515491
    117304 6ah7:B (2.38) BS02 MN N/A GO:0016795 ... N/A 32515491
    117305 6ah7:C (2.38) BS01 MN N/A GO:0016795 ... N/A 32515491
    117306 6ah7:C (2.38) BS02 MN N/A GO:0016795 ... N/A 32515491
    117307 6ah7:D (2.38) BS01 MN N/A GO:0016795 ... N/A 32515491
    117308 6ah7:D (2.38) BS02 MN N/A GO:0016795 ... N/A 32515491
    117309 6ah8:A (2.61) BS01 MN N/A GO:0016795 ... N/A 32515491
    117310 6ah8:A (2.61) BS02 MN N/A GO:0016795 ... N/A 32515491
    117311 6ah8:B (2.61) BS01 MN N/A GO:0016795 ... N/A 32515491
    117312 6ah8:B (2.61) BS02 MN N/A GO:0016795 ... N/A 32515491
    117313 6ah8:C (2.61) BS01 MN N/A GO:0016795 ... N/A 32515491
    117314 6ah8:C (2.61) BS02 MN N/A GO:0016795 ... N/A 32515491
    117315 6ah8:D (2.61) BS01 MN N/A GO:0016795 ... N/A 32515491
    117316 6ah8:D (2.61) BS02 MN N/A GO:0016795 ... N/A 32515491
    117317 6ahd:C (3.8) BS02 MG ? GO:0000398 ... Q15029 30315277
    117318 6ahg:A (2.83) BS01 CA ? GO:0030246 ... P02866 30380822
    117319 6ahg:A (2.83) BS02 CD ? GO:0030246 ... P02866 30380822
    117320 6ahg:A (2.83) BS03 CD ? GO:0030246 ... P02866 30380822
    117321 6ahg:B (2.83) BS01 CA ? GO:0030246 ... P02866 30380822
    117322 6ahg:B (2.83) BS02 CD ? GO:0030246 ... P02866 30380822
    117323 6ahg:B (2.83) BS03 CD ? GO:0030246 ... P02866 30380822
    117324 6ahg:C (2.83) BS01 CD ? GO:0030246 ... P02866 30380822
    117325 6ahg:C (2.83) BS02 CA ? GO:0030246 ... P02866 30380822
    117326 6ahg:C (2.83) BS03 CD ? GO:0030246 ... P02866 30380822
    117327 6ai0:A (2.4) BS01 CA ? GO:0009306 ... P40729 31031200
    117328 6ai0:B (2.4) BS01 CA ? GO:0009306 ... P40729 31031200
    117329 6ai5:A (1.81) BS02 ZN ? GO:0005506 ... P0ABE7 N/A
    117330 6ai5:A (1.81) BS03 ZN ? GO:0005506 ... P0ABE7 N/A
    117331 6ai5:A (1.81) BS04 MG ? GO:0005506 ... P0ABE7 N/A
    117332 6ai5:C (1.81) BS01 ZN ? GO:0005506 ... P0ABE7 N/A
    117333 6ai5:E (1.81) BS01 ZN ? GO:0005506 ... P0ABE7 N/A
    117334 6ai5:E (1.81) BS02 ZN ? GO:0005506 ... P0ABE7 N/A
    117335 6ai5:G (1.81) BS01 ZN ? GO:0005506 ... P0ABE7 N/A
    117336 6ai5:G (1.81) BS02 ZN ? GO:0005506 ... P0ABE7 N/A
    117337 6aid:A (1.3) BS01 CA 3.1.1.101
    3.1.1.74    		 N/A F7IX06 30761732
    117338 6aid:A (1.3) BS02 CA 3.1.1.101
    3.1.1.74    		 N/A F7IX06 30761732
    117339 6aii:A (1.63) BS01 CA N/A GO:0004553 ... N/A 31784792
    117340 6aij:A (2.096) BS01 CA 2.4.1.19 GO:0004556 ... P04830 N/A
    117341 6aij:A (2.096) BS02 CA 2.4.1.19 GO:0004556 ... P04830 N/A
    117342 6aij:A (2.096) BS03 CA 2.4.1.19 GO:0004556 ... P04830 N/A
    117343 6ait:A (2.598) BS01 ZN 3.4.-.- GO:0003756 ... P66948 30521812
    117344 6ait:B (2.598) BS01 ZN 3.4.-.- GO:0003756 ... P66948 30521812
    117345 6ait:C (2.598) BS01 ZN 3.4.-.- GO:0003756 ... P66948 30521812
    117346 6ait:D (2.598) BS01 ZN 3.4.-.- GO:0003756 ... P66948 30521812
    117347 6ait:E (2.598) BS01 ZN 3.4.-.- GO:0003756 ... P66948 30521812
    117348 6ait:F (2.598) BS01 ZN 3.4.-.- GO:0003756 ... P66948 30521812
    117349 6aix:A (1.8) BS02 MG 3.1.13.-
    3.6.1.-    		 GO:0000166 ... O70348 30180947
    117350 6aix:A (1.8) BS03 MG 3.1.13.-
    3.6.1.-    		 GO:0000166 ... O70348 30180947
    117351 6aiy:A (1.902) BS02 MG 3.1.13.-
    3.6.1.-    		 GO:0000166 ... O70348 30180947
    117352 6aj8:A (2.4) BS02 CA 1.1.1.42 GO:0000166 ... Q387G0 N/A
    117353 6aj8:B (2.4) BS01 CA 1.1.1.42 GO:0000166 ... Q387G0 N/A
    117354 6aja:A (2.85) BS02 CA 1.1.1.42 GO:0000166 ... Q387G0 N/A
    117355 6aja:B (2.85) BS01 CA 1.1.1.42 GO:0000166 ... Q387G0 N/A
    117356 6aja:C (2.85) BS02 CA 1.1.1.42 GO:0000166 ... Q387G0 N/A
    117357 6aja:D (2.85) BS02 CA 1.1.1.42 GO:0000166 ... Q387G0 N/A
    117358 6ajb:A (2.9) BS02 CA 1.1.1.42 GO:0000166 ... Q387G0 N/A
    117359 6ajb:B (2.9) BS02 CA 1.1.1.42 GO:0000166 ... Q387G0 N/A
    117360 6ajb:C (2.9) BS02 CA 1.1.1.42 GO:0000166 ... Q387G0 N/A
    117361 6ajb:D (2.9) BS03 CA 1.1.1.42 GO:0000166 ... Q387G0 N/A
    117362 6ajc:A (2.4) BS02 CA 1.1.1.42 GO:0000166 ... Q4E4L7 N/A
    117363 6ajc:B (2.4) BS03 CA 1.1.1.42 GO:0000166 ... Q4E4L7 N/A
    117364 6ajc:C (2.4) BS02 CA 1.1.1.42 GO:0000166 ... Q4E4L7 N/A
    117365 6ajc:D (2.4) BS03 CA 1.1.1.42 GO:0000166 ... Q4E4L7 N/A
    117366 6ajc:E (2.4) BS02 CA 1.1.1.42 GO:0000166 ... Q4E4L7 N/A
    117367 6ajc:F (2.4) BS03 CA 1.1.1.42 GO:0000166 ... Q4E4L7 N/A
    117368 6ajc:G (2.4) BS02 CA 1.1.1.42 GO:0000166 ... Q4E4L7 N/A
    117369 6ajc:H (2.4) BS03 CA 1.1.1.42 GO:0000166 ... Q4E4L7 N/A
    117370 6ajd:A (2.223) BS01 ZN 3.5.2.2 GO:0004157 ... Q9I676 30268498
    117371 6ajd:B (2.223) BS01 ZN 3.5.2.2 GO:0004157 ... Q9I676 30268498
    117372 6ak4:A (2.8) BS01 ZN 1.14.11.-
    1.14.11.53    		 GO:0006307 ... Q9C0B1 30996080
    117373 6ak5:A (1.7) BS01 MN 2.7.7.7 GO:0003677 ... Q9NP87 31067051
    117374 6ak5:A (1.7) BS02 MN 2.7.7.7 GO:0003677 ... Q9NP87 31067051
    117375 6ak6:A (1.75) BS01 MN 2.7.7.7 GO:0003677 ... Q9NP87 31067051
    117376 6ak6:A (1.75) BS02 MN 2.7.7.7 GO:0003677 ... Q9NP87 31067051
    117377 6ak7:A (2.605) BS01 MG 3.1.3.16
    3.1.3.52    		 GO:0004722 ... Q8N3J5 N/A
    117378 6ak7:A (2.605) BS02 MG 3.1.3.16
    3.1.3.52    		 GO:0004722 ... Q8N3J5 N/A
    117379 6ak7:A (2.605) BS03 MG 3.1.3.16
    3.1.3.52    		 GO:0004722 ... Q8N3J5 N/A
    117380 6ak7:A (2.605) BS04 MG 3.1.3.16
    3.1.3.52    		 GO:0004722 ... Q8N3J5 N/A
    117381 6ak8:A (1.74) BS04 CA 2.7.7.7 GO:0003677 ... Q9NP87 31067051
    117382 6ak8:A (1.74) BS05 CA 2.7.7.7 GO:0003677 ... Q9NP87 31067051
    117383 6ak9:A (1.91) BS04 CA 2.7.7.7 GO:0003677 ... Q9NP87 31067051
    117384 6ak9:A (1.91) BS05 CA 2.7.7.7 GO:0003677 ... Q9NP87 31067051
    117385 6akh:A (1.75) BS04 MN 2.7.7.7 GO:0003677 ... Q9NP87 31067051
    117386 6akh:A (1.75) BS05 MN 2.7.7.7 GO:0003677 ... Q9NP87 31067051
    117387 6akn:A (1.19) BS01 CU ? GO:0005507 ... P19567 N/A
    117388 6akn:B (1.19) BS01 CU ? GO:0005507 ... P19567 N/A
    117389 6ako:C (2.396) BS03 MG ? GO:0003700 ... Q99958 30722065
    117390 6akp:C (2.323) BS02 MG ? GO:0003700 ... Q99958 30722065
    117391 6akr:A (2.326) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 33234690
    117392 6akr:B (2.326) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 33234690
    117393 6akr:C (2.326) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 33234690
    117394 6akr:D (2.326) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 33234690
    117395 6akv:A (2.4) BS01 ZN ? GO:0008233 ... H9NAL3 30518175
    117396 6akx:A (2.8) BS01 ZN ? GO:0004930 ... P00268
    P51681    		 30234300
    117397 6akx:B (2.8) BS01 ZN ? GO:0004930 ... P00268
    P51681    		 30234300
    117398 6aky:A (2.8) BS01 ZN ? GO:0004930 ... P00268
    P51681    		 30234300
    117399 6akz:A (1.69) BS01 FE ? GO:0003674 ... A0A1D8PEJ2 31743702
    117400 6al6:A (2.088) BS01 CA ? GO:0046872 ... A0A076NBW8 29531360
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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