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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    105201 5pay:C (1.66) BS01 CA 3.4.21.21 GO:0004252 ... P08709 N/A
    105202 5paz:A (1.76) BS01 CU ? GO:0005507 ... P04377 9341204
    105203 5pb0:B (1.98) BS02 CA 3.4.21.21 GO:0004252 ... P08709 N/A
    105204 5pb1:D (1.9) BS01 CA 3.4.21.21 GO:0004252 ... P08709 N/A
    105205 5pb2:C (1.45) BS01 CA 3.4.21.21 GO:0004252 ... P08709 N/A
    105206 5pb3:C (1.9) BS02 CA 3.4.21.21 GO:0004252 ... P08709 N/A
    105207 5pb4:C (2.43) BS02 CA 3.4.21.21 GO:0004252 ... P08709 N/A
    105208 5pb5:B (1.84) BS02 CA 3.4.21.21 GO:0004252 ... P08709 N/A
    105209 5pb6:C (1.9) BS01 CA 3.4.21.21 GO:0004252 ... P08709 N/A
    105210 5pcy:A (1.8) BS01 CU ? GO:0005507 ... P00299 3560221
    105211 5ph0:A (1.341) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105212 5ph0:A (1.341) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105213 5ph1:A (1.249) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105214 5ph2:A (1.454) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105215 5ph3:A (1.24) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105216 5ph4:A (1.269) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105217 5ph5:A (1.349) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105218 5ph6:A (1.742) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105219 5ph7:A (1.431) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105220 5ph8:A (1.396) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105221 5ph9:A (1.48) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105222 5pha:A (1.45) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105223 5phb:A (1.338) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105224 5phc:A (1.29) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105225 5phd:A (1.359) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105226 5phe:A (1.351) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105227 5phf:A (1.389) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105228 5phg:A (1.398) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105229 5phh:A (1.604) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105230 5phi:A (1.971) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105231 5phj:A (1.15) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105232 5phk:A (1.25) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105233 5phl:A (1.141) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105234 5phm:A (1.398) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105235 5phn:A (1.29) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105236 5pho:A (1.4) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105237 5pho:A (1.4) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105238 5php:A (1.72) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105239 5php:A (1.72) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105240 5phq:A (2.23) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105241 5phq:A (2.23) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105242 5phr:A (1.66) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105243 5phr:A (1.66) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105244 5phs:A (2.54) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105245 5phs:A (2.54) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105246 5pht:A (1.83) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105247 5pht:A (1.83) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105248 5phu:A (1.79) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105249 5phu:A (1.79) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105250 5phv:A (1.83) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105251 5phv:A (1.83) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105252 5phw:A (1.31) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105253 5phw:A (1.31) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105254 5phx:A (1.27) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105255 5phx:A (1.27) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105256 5phy:A (1.34) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105257 5phy:A (1.34) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105258 5phz:A (1.47) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105259 5phz:A (1.47) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105260 5pi0:A (1.5) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105261 5pi0:A (1.5) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105262 5pi1:A (1.34) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105263 5pi1:A (1.34) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105264 5pi2:A (1.52) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105265 5pi2:A (1.52) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105266 5pi3:A (1.29) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105267 5pi3:A (1.29) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105268 5pi4:A (1.35) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105269 5pi4:A (1.35) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105270 5pi5:A (1.42) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105271 5pi5:A (1.42) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105272 5pi6:A (1.29) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105273 5pi6:A (1.29) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105274 5pi7:A (1.61) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105275 5pi7:A (1.61) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105276 5pi8:A (1.27) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105277 5pi8:A (1.27) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105278 5pi9:A (1.45) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105279 5pi9:A (1.45) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105280 5pia:A (1.18) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105281 5pia:A (1.18) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105282 5pib:A (1.64) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105283 5pib:A (1.64) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105284 5pic:A (1.29) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105285 5pic:A (1.29) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105286 5pid:A (1.5) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105287 5pid:A (1.5) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105288 5pie:A (1.42) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105289 5pie:A (1.42) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105290 5pif:A (1.37) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105291 5pif:A (1.37) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105292 5pig:A (1.44) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105293 5pig:A (1.44) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105294 5pih:A (1.79) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105295 5pih:A (1.79) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105296 5pii:A (1.45) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105297 5pii:A (1.45) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105298 5pij:A (1.45) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105299 5pij:A (1.45) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105300 5pik:A (1.8) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105301 5pik:A (1.8) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105302 5pil:A (1.65) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105303 5pil:A (1.65) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105304 5pim:A (1.25) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105305 5pim:A (1.25) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105306 5pin:A (1.5) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105307 5pin:A (1.5) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105308 5pio:A (1.72) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105309 5pio:A (1.72) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105310 5pip:A (1.42) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105311 5pip:A (1.42) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105312 5piq:A (1.5) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105313 5piq:A (1.5) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105314 5pir:A (1.45) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105315 5pir:A (1.45) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105316 5pis:A (1.3) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105317 5pis:A (1.3) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105318 5pit:A (1.79) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105319 5pit:A (1.79) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105320 5piu:A (1.48) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105321 5piu:A (1.48) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105322 5piv:A (1.43) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105323 5piv:A (1.43) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105324 5piw:A (1.23) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105325 5piw:A (1.23) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105326 5pix:A (1.35) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105327 5pix:A (1.35) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105328 5piy:A (1.31) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105329 5piy:A (1.31) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105330 5piz:A (1.38) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105331 5piz:A (1.38) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105332 5pj0:A (1.31) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105333 5pj0:A (1.31) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105334 5pj1:A (1.35) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105335 5pj1:A (1.35) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105336 5pj2:A (1.44) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105337 5pj2:A (1.44) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105338 5pj3:A (1.3) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105339 5pj3:A (1.3) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105340 5pj4:A (1.52) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105341 5pj4:A (1.52) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105342 5pj5:A (1.24) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105343 5pj5:A (1.24) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105344 5pj6:A (1.35) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105345 5pj6:A (1.35) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105346 5pj7:A (1.39) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105347 5pj7:A (1.39) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105348 5pj8:A (1.4) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105349 5pj8:A (1.4) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105350 5pj9:A (1.5) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105351 5pj9:A (1.5) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105352 5pja:A (1.89) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105353 5pja:A (1.89) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105354 5pjb:A (1.58) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105355 5pjb:A (1.58) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105356 5pjc:A (1.4) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105357 5pjc:A (1.4) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105358 5pjd:A (1.43) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105359 5pjd:A (1.43) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105360 5pje:A (1.37) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105361 5pje:A (1.37) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105362 5pjf:A (1.47) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105363 5pjf:A (1.47) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105364 5pjg:A (1.4) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105365 5pjg:A (1.4) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105366 5pjh:A (1.18) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105367 5pjh:A (1.18) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105368 5pji:A (1.34) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105369 5pji:A (1.34) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105370 5pjj:A (1.67) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105371 5pjj:A (1.67) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105372 5pjk:A (1.69) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105373 5pjk:A (1.69) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105374 5pjl:A (1.52) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105375 5pjl:A (1.52) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105376 5pjm:A (1.43) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105377 5pjm:A (1.43) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105378 5pjn:A (1.48) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105379 5pjn:A (1.48) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105380 5pjo:A (1.35) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105381 5pjo:A (1.35) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105382 5pjp:A (1.39) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105383 5pjp:A (1.39) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105384 5pjq:A (1.38) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105385 5pjq:A (1.38) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105386 5pjr:A (1.29) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105387 5pjr:A (1.29) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105388 5pjs:A (1.64) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105389 5pjs:A (1.64) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105390 5pjt:A (1.54) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105391 5pjt:A (1.54) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105392 5pju:A (1.27) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105393 5pju:A (1.27) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105394 5pjv:A (1.34) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105395 5pjv:A (1.34) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105396 5pjw:A (1.56) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105397 5pjw:A (1.56) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105398 5pjx:A (1.35) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105399 5pjx:A (1.35) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105400 5pjy:A (1.34) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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