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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 45686 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • The sequence is converted from residues with experimentally determined coordinates in the structure; residues not observed in the 3D structure are excluded.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (resolution)     		Site
    #     		DNA
    sequence         		EC
    number     		GO
    terms     		UniProt PubMed Binding
    affinity
    44101 8vpi:B
    (2.89)    		 BS01 >8vpi:F (identical to 8cxs:D, 8cxs:F, 8cxs:H, 8cxt:D, 8cxt:F, 8cxt:H, 8cxu:D, 8cxu:F, 8cxu:H, 8cxv:D, 8cxv:F, 8cxv:H, 8cxw:D, 8cxw:F, 8cxw:H, 8cxx:D, 8cxx:F, 8cxx:H, 8cxy:D, 8cxy:F, 8cxy:H, 8cxz:D, 8cxz:F, 8cxz:H, 8cy0:D, 8cy0:F, 8cy0:H, 8cy1:D, 8cy1:F, 8cy1:H, 8cy2:D, 8cy2:F, 8cy2:H, 8cy3:D, 8cy3:F, 8cy3:H, 8cy4:D, 8cy4:F, 8cy4:H, 8cy5:D, 8cy5:F, 8cy5:H, 8fs1:D, 8fs1:F, 8fs1:H, 8fs2:D, 8fs2:F, 8fs2:H, 7lni:D, 7lni:F, 7lni:H, 7lnj:D, 7lnj:F, 7lnj:H, 7lt5:D, 7lt5:F, 7lt5:H, 7rfk:D, 7rfk:F, 7rfk:H, 7rfl:D, 7rfl:F, 7rfl:H, 7rfm:D, 7rfm:F, 7rfm:H, 7rfn:D, 7rfn:F, 7rfn:H, 8vpg:D, 8vpg:F, 8vpg:H, 8vph:D, 8vph:F, 8vph:H, 8vpi:D, 8vpi:H)
    ttcaaaaagtccca
    		 N/A N/A A0A031WG99 N/A
    44102 8vpi:B
    (2.89)    		 BS02 >8vpi:G (identical to 8cxs:E, 8cxs:G, 8cxs:I, 8cxt:G, 8cxt:I, 8cxu:E, 8cxu:G, 8cxu:I, 8cxv:E, 8cxv:G, 8cxv:I, 8cxw:E, 8cxw:G, 8cxw:I, 8cxx:E, 8cxx:G, 8cxx:I, 8cxy:E, 8cxy:G, 8cxy:I, 8cxz:E, 8cxz:G, 8cxz:I, 8cy0:E, 8cy0:G, 8cy0:I, 8cy1:E, 8cy1:G, 8cy1:I, 8cy2:E, 8cy2:G, 8cy2:I, 8cy3:E, 8cy3:G, 8cy3:I, 8cy4:E, 8cy4:G, 8cy4:I, 8cy5:E, 8cy5:G, 8cy5:I, 8fs1:E, 8fs1:G, 8fs1:I, 8fs2:E, 8fs2:G, 8fs2:I, 7lni:E, 7lni:G, 7lni:I, 7lnj:G, 7lnj:I, 7lt5:G, 7lt5:I, 7rfk:G, 7rfk:I, 7rfl:G, 7rfl:I, 7rfm:G, 7rfm:I, 7rfn:E, 7rfn:G, 7rfn:I, 8vpg:G, 8vpg:I, 8vph:G, 8vph:I, 8vpi:I)
    atgggactttttga
    		 N/A N/A A0A031WG99 N/A
    44103 8vpi:C
    (2.89)    		 BS01 >8vpi:H (identical to 8cxs:D, 8cxs:F, 8cxs:H, 8cxt:D, 8cxt:F, 8cxt:H, 8cxu:D, 8cxu:F, 8cxu:H, 8cxv:D, 8cxv:F, 8cxv:H, 8cxw:D, 8cxw:F, 8cxw:H, 8cxx:D, 8cxx:F, 8cxx:H, 8cxy:D, 8cxy:F, 8cxy:H, 8cxz:D, 8cxz:F, 8cxz:H, 8cy0:D, 8cy0:F, 8cy0:H, 8cy1:D, 8cy1:F, 8cy1:H, 8cy2:D, 8cy2:F, 8cy2:H, 8cy3:D, 8cy3:F, 8cy3:H, 8cy4:D, 8cy4:F, 8cy4:H, 8cy5:D, 8cy5:F, 8cy5:H, 8fs1:D, 8fs1:F, 8fs1:H, 8fs2:D, 8fs2:F, 8fs2:H, 7lni:D, 7lni:F, 7lni:H, 7lnj:D, 7lnj:F, 7lnj:H, 7lt5:D, 7lt5:F, 7lt5:H, 7rfk:D, 7rfk:F, 7rfk:H, 7rfl:D, 7rfl:F, 7rfl:H, 7rfm:D, 7rfm:F, 7rfm:H, 7rfn:D, 7rfn:F, 7rfn:H, 8vpg:D, 8vpg:F, 8vpg:H, 8vph:D, 8vph:F, 8vph:H, 8vpi:D, 8vpi:F)
    ttcaaaaagtccca
    		 N/A N/A A0A031WG99 N/A
    44104 8vpi:C
    (2.89)    		 BS02 >8vpi:I (identical to 8cxs:E, 8cxs:G, 8cxs:I, 8cxt:G, 8cxt:I, 8cxu:E, 8cxu:G, 8cxu:I, 8cxv:E, 8cxv:G, 8cxv:I, 8cxw:E, 8cxw:G, 8cxw:I, 8cxx:E, 8cxx:G, 8cxx:I, 8cxy:E, 8cxy:G, 8cxy:I, 8cxz:E, 8cxz:G, 8cxz:I, 8cy0:E, 8cy0:G, 8cy0:I, 8cy1:E, 8cy1:G, 8cy1:I, 8cy2:E, 8cy2:G, 8cy2:I, 8cy3:E, 8cy3:G, 8cy3:I, 8cy4:E, 8cy4:G, 8cy4:I, 8cy5:E, 8cy5:G, 8cy5:I, 8fs1:E, 8fs1:G, 8fs1:I, 8fs2:E, 8fs2:G, 8fs2:I, 7lni:E, 7lni:G, 7lni:I, 7lnj:G, 7lnj:I, 7lt5:G, 7lt5:I, 7rfk:G, 7rfk:I, 7rfl:G, 7rfl:I, 7rfm:G, 7rfm:I, 7rfn:E, 7rfn:G, 7rfn:I, 8vpg:G, 8vpg:I, 8vph:G, 8vph:I, 8vpi:G)
    atgggactttttga
    		 N/A N/A A0A031WG99 N/A
    44105 8vq2:A
    (3.829)    		 BS01 >8vq2:C (identical to 5iud:B, 5iud:K)
    tggtaggggaaggat
    		 N/A N/A I7GY94 39140041
    44106 8vq2:A
    (3.829)    		 BS02 >8vq2:D (identical to 5iud:C, 5iud:F, 5iud:L, 8vq2:F)
    atccttcccctac
    		 N/A N/A I7GY94 39140041
    44107 8vq2:B
    (3.829)    		 BS01 >8vq2:E
    ggtaggggaaggat
    		 N/A N/A I7GY94 39140041
    44108 8vq2:B
    (3.829)    		 BS02 >8vq2:F (identical to 5iud:C, 5iud:F, 5iud:L, 8vq2:D)
    atccttcccctac
    		 N/A N/A I7GY94 39140041
    44109 8vxa:A
    (2.79)    		 BS01 >8vxa:B
    tgtagcattccaca
    		 ? GO:0003676 ... A0A426EXV0 38464307
    44110 8vxa:A
    (2.79)    		 BS02 >8vxa:C
    gcattccaca
    		 ? GO:0003676 ... A0A426EXV0 38464307
    44111 8vxc:A
    (2.93)    		 BS01 >8vxc:C
    gcattccac
    		 ? GO:0003676 ... A0A426EXV0 38464307
    44112 8vxc:A
    (2.93)    		 BS02 >8vxc:B
    gtagcattccaca
    		 ? GO:0003676 ... A0A426EXV0 38464307
    44113 8vxy:B
    (3.19)    		 BS01 >8vxy:C
    ttttttttttttttttttttttttttttttt
    		 ? GO:0003676 ... A0A426EXV0 38464307
    44114 8vxy:B
    (3.19)    		 BS02 >8vxy:D
    aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
    		 ? GO:0003676 ... A0A426EXV0 38464307
    44115 8vzl:A
    (2.41)    		 BS01 >8vzl:B (identical to 1bpz:P, 9bs3:B, 9bs3:F, 9bs4:B, 9bs4:F, 6p0e:B, 7sxe:B, 8vdn:B)
    gctgatgcgtg
    		 6.5.1.1 N/A P18858 38522520
    44116 8vzl:A
    (2.41)    		 BS02 >8vzl:D (identical to 9bs3:D, 9bs3:H, 9bs4:D, 9bs4:H, 7sx5:D, 8vdn:D, 8vds:C)
    gtccgaccacgcatcagc
    		 6.5.1.1 N/A P18858 38522520
    44117 8vzl:A
    (2.41)    		 BS03 >8vzl:C (identical to 6bkf:D, 6bkg:D, 9bs3:C, 9bs3:G, 9bs4:C, 9bs4:G, 7l34:C, 7l35:C, 6p09:C, 6p0a:C, 6p0b:C, 6p0c:C, 6p0d:C, 6p0e:C, 6q1v:C, 7sum:C, 7sx5:C, 7sxe:C, 8vdn:C, 8vzm:C)
    gtcggac
    		 6.5.1.1 N/A P18858 38522520
    44118 8vzm:A
    (2.51)    		 BS01 >8vzm:B (identical to 7sum:B, 7sx5:B)
    gctgatgcgta
    		 6.5.1.1 N/A P18858 38522520
    44119 8vzm:A
    (2.51)    		 BS02 >8vzm:D (identical to 7sum:D, 7sxe:D, 8vdt:C)
    gtccgactacgcatcagc
    		 6.5.1.1 N/A P18858 38522520
    44120 8vzm:A
    (2.51)    		 BS03 >8vzm:C (identical to 6bkf:D, 6bkg:D, 9bs3:C, 9bs3:G, 9bs4:C, 9bs4:G, 7l34:C, 7l35:C, 6p09:C, 6p0a:C, 6p0b:C, 6p0c:C, 6p0d:C, 6p0e:C, 6q1v:C, 7sum:C, 7sx5:C, 7sxe:C, 8vdn:C, 8vzl:C)
    gtcggac
    		 6.5.1.1 N/A P18858 38522520
    44121 8w09:A
    (3.2)    		 BS01 >8w09:E (identical to 8w09:N, 8w34:E, 8w34:N)
    actgctagagattttccac
    		 ? GO:0003676 ... P12497 38582148
    44122 8w09:A
    (3.2)    		 BS02 >8w09:F (identical to 8w09:O, 8w34:F, 8w34:O)
    gtggaaaatctctagca
    		 ? GO:0003676 ... P12497 38582148
    44123 8w09:A
    (3.2)    		 BS03 >8w09:N (identical to 8w09:E, 8w34:E, 8w34:N)
    actgctagagattttccac
    		 ? GO:0003676 ... P12497 38582148
    44124 8w09:A
    (3.2)    		 BS04 >8w09:O (identical to 8w09:F, 8w34:F, 8w34:O)
    gtggaaaatctctagca
    		 ? GO:0003676 ... P12497 38582148
    44125 8w09:D
    (3.2)    		 BS01 >8w09:E (identical to 8w09:N, 8w34:E, 8w34:N)
    actgctagagattttccac
    		 ? GO:0003676 ... P12497 38582148
    44126 8w09:D
    (3.2)    		 BS02 >8w09:O (identical to 8w09:F, 8w34:F, 8w34:O)
    gtggaaaatctctagca
    		 ? GO:0003676 ... P12497 38582148
    44127 8w09:I
    (3.2)    		 BS01 >8w09:E (identical to 8w09:N, 8w34:E, 8w34:N)
    actgctagagattttccac
    		 ? GO:0003676 ... P12497 38582148
    44128 8w09:I
    (3.2)    		 BS02 >8w09:F (identical to 8w09:O, 8w34:F, 8w34:O)
    gtggaaaatctctagca
    		 ? GO:0003676 ... P12497 38582148
    44129 8w09:I
    (3.2)    		 BS03 >8w09:N (identical to 8w09:E, 8w34:E, 8w34:N)
    actgctagagattttccac
    		 ? GO:0003676 ... P12497 38582148
    44130 8w09:I
    (3.2)    		 BS04 >8w09:O (identical to 8w09:F, 8w34:F, 8w34:O)
    gtggaaaatctctagca
    		 ? GO:0003676 ... P12497 38582148
    44131 8w09:M
    (3.2)    		 BS01 >8w09:F (identical to 8w09:O, 8w34:F, 8w34:O)
    gtggaaaatctctagca
    		 ? GO:0003676 ... P12497 38582148
    44132 8w09:M
    (3.2)    		 BS02 >8w09:N (identical to 8w09:E, 8w34:E, 8w34:N)
    actgctagagattttccac
    		 ? GO:0003676 ... P12497 38582148
    44133 8w0a:A
    (3.2)    		 BS01 >8w0a:B (identical to 4a76:B, 4a76:D, 4bhm:I, 3gpl:X, 3gpl:Y, 2gxa:N, 6hv9:J, 5ip3:E, 6j80:C, 4n0o:B, 4n0o:D, 4n0o:F, 4n0o:H, 4pog:X, 4pog:Z, 4pso:E, 7s9w:C, 8w0a:D)
    ttttttt
    		 N/A N/A O75417 38895274
    44134 8w0a:C
    (3.2)    		 BS01 >8w0a:D (identical to 4a76:B, 4a76:D, 4bhm:I, 3gpl:X, 3gpl:Y, 2gxa:N, 6hv9:J, 5ip3:E, 6j80:C, 4n0o:B, 4n0o:D, 4n0o:F, 4n0o:H, 4pog:X, 4pog:Z, 4pso:E, 7s9w:C, 8w0a:B)
    ttttttt
    		 N/A N/A O75417 38895274
    44135 8w1p:A
    (3.5)    		 BS02 >8w1p:T
    ggccttattaaatgacttctccgtacgcttgc
    		 N/A N/A N/A 39111310
    44136 8w1p:B
    (3.5)    		 BS02 >8w1p:T
    ggccttattaaatgacttctccgtacgcttgc
    		 N/A N/A N/A 39111310
    44137 8w1p:C
    (3.5)    		 BS02 >8w1p:T
    ggccttattaaatgacttctccgtacgcttgc
    		 N/A N/A N/A 39111310
    44138 8w1p:D
    (3.5)    		 BS02 >8w1p:T
    ggccttattaaatgacttctccgtacgcttgc
    		 N/A N/A N/A 39111310
    44139 8w1p:E
    (3.5)    		 BS02 >8w1p:T
    ggccttattaaatgacttctccgtacgcttgc
    		 N/A N/A N/A 39111310
    44140 8w1p:G
    (3.5)    		 BS01 >8w1p:N
    gcaagcgtacgga
    		 N/A N/A N/A 39111310
    44141 8w1p:G
    (3.5)    		 BS03 >8w1p:T
    ggccttattaaatgacttctccgtacgcttgc
    		 N/A N/A N/A 39111310
    44142 8w1p:H
    (3.5)    		 BS02 >8w1p:T
    ggccttattaaatgacttctccgtacgcttgc
    		 N/A N/A N/A 39111310
    44143 8w2r:A
    (3.23)    		 BS01 >8w2r:E (identical to 9c9m:E, 9c9m:N, 8fn7:E, 8fn7:K, 8fnd:E, 8fnd:K, 8fng:E, 8fng:K, 8fnh:E, 8fnh:K, 8fnj:E, 8fnj:K, 8fnl:E, 8fnl:K, 8fnm:E, 8fnm:K, 8fnn:E, 8fnn:K, 8fno:E, 8fno:K, 8fnp:E, 8fnp:K, 8fnq:E, 8fnq:K, 6puw:E, 6puy:E, 6puz:E, 6v3k:E, 8w2r:N)
    actgctagagattttcccg
    		 ? GO:0003676 ... P12497 38582148
    44144 8w2r:A
    (3.23)    		 BS02 >8w2r:F (identical to 9c9m:F, 9c9m:O, 8fn7:F, 8fn7:L, 8fnd:F, 8fnd:L, 8fng:F, 8fng:L, 8fnh:F, 8fnh:L, 8fnj:F, 8fnj:L, 8fnl:F, 8fnl:L, 8fnm:F, 8fnm:L, 8fnn:F, 8fnn:L, 8fno:F, 8fno:L, 8fnp:F, 8fnp:L, 8fnq:F, 8fnq:L, 6puw:F, 6puy:F, 6puz:F, 6v3k:F, 8w2r:O)
    cgggaaaatctctagca
    		 ? GO:0003676 ... P12497 38582148
    44145 8w2r:A
    (3.23)    		 BS03 >8w2r:N (identical to 9c9m:E, 9c9m:N, 8fn7:E, 8fn7:K, 8fnd:E, 8fnd:K, 8fng:E, 8fng:K, 8fnh:E, 8fnh:K, 8fnj:E, 8fnj:K, 8fnl:E, 8fnl:K, 8fnm:E, 8fnm:K, 8fnn:E, 8fnn:K, 8fno:E, 8fno:K, 8fnp:E, 8fnp:K, 8fnq:E, 8fnq:K, 6puw:E, 6puy:E, 6puz:E, 6v3k:E, 8w2r:E)
    actgctagagattttcccg
    		 ? GO:0003676 ... P12497 38582148
    44146 8w2r:A
    (3.23)    		 BS04 >8w2r:O (identical to 9c9m:F, 9c9m:O, 8fn7:F, 8fn7:L, 8fnd:F, 8fnd:L, 8fng:F, 8fng:L, 8fnh:F, 8fnh:L, 8fnj:F, 8fnj:L, 8fnl:F, 8fnl:L, 8fnm:F, 8fnm:L, 8fnn:F, 8fnn:L, 8fno:F, 8fno:L, 8fnp:F, 8fnp:L, 8fnq:F, 8fnq:L, 6puw:F, 6puy:F, 6puz:F, 6v3k:F, 8w2r:F)
    cgggaaaatctctagca
    		 ? GO:0003676 ... P12497 38582148
    44147 8w2r:C
    (3.23)    		 BS01 >8w2r:E (identical to 9c9m:E, 9c9m:N, 8fn7:E, 8fn7:K, 8fnd:E, 8fnd:K, 8fng:E, 8fng:K, 8fnh:E, 8fnh:K, 8fnj:E, 8fnj:K, 8fnl:E, 8fnl:K, 8fnm:E, 8fnm:K, 8fnn:E, 8fnn:K, 8fno:E, 8fno:K, 8fnp:E, 8fnp:K, 8fnq:E, 8fnq:K, 6puw:E, 6puy:E, 6puz:E, 6v3k:E, 8w2r:N)
    actgctagagattttcccg
    		 ? GO:0003676 ... P12497 38582148
    44148 8w2r:D
    (3.23)    		 BS01 >8w2r:E (identical to 9c9m:E, 9c9m:N, 8fn7:E, 8fn7:K, 8fnd:E, 8fnd:K, 8fng:E, 8fng:K, 8fnh:E, 8fnh:K, 8fnj:E, 8fnj:K, 8fnl:E, 8fnl:K, 8fnm:E, 8fnm:K, 8fnn:E, 8fnn:K, 8fno:E, 8fno:K, 8fnp:E, 8fnp:K, 8fnq:E, 8fnq:K, 6puw:E, 6puy:E, 6puz:E, 6v3k:E, 8w2r:N)
    actgctagagattttcccg
    		 ? GO:0003676 ... P12497 38582148
    44149 8w2r:D
    (3.23)    		 BS02 >8w2r:O (identical to 9c9m:F, 9c9m:O, 8fn7:F, 8fn7:L, 8fnd:F, 8fnd:L, 8fng:F, 8fng:L, 8fnh:F, 8fnh:L, 8fnj:F, 8fnj:L, 8fnl:F, 8fnl:L, 8fnm:F, 8fnm:L, 8fnn:F, 8fnn:L, 8fno:F, 8fno:L, 8fnp:F, 8fnp:L, 8fnq:F, 8fnq:L, 6puw:F, 6puy:F, 6puz:F, 6v3k:F, 8w2r:F)
    cgggaaaatctctagca
    		 ? GO:0003676 ... P12497 38582148
    44150 8w2r:I
    (3.23)    		 BS01 >8w2r:E (identical to 9c9m:E, 9c9m:N, 8fn7:E, 8fn7:K, 8fnd:E, 8fnd:K, 8fng:E, 8fng:K, 8fnh:E, 8fnh:K, 8fnj:E, 8fnj:K, 8fnl:E, 8fnl:K, 8fnm:E, 8fnm:K, 8fnn:E, 8fnn:K, 8fno:E, 8fno:K, 8fnp:E, 8fnp:K, 8fnq:E, 8fnq:K, 6puw:E, 6puy:E, 6puz:E, 6v3k:E, 8w2r:N)
    actgctagagattttcccg
    		 ? GO:0003676 ... P12497 38582148
    44151 8w2r:I
    (3.23)    		 BS02 >8w2r:F (identical to 9c9m:F, 9c9m:O, 8fn7:F, 8fn7:L, 8fnd:F, 8fnd:L, 8fng:F, 8fng:L, 8fnh:F, 8fnh:L, 8fnj:F, 8fnj:L, 8fnl:F, 8fnl:L, 8fnm:F, 8fnm:L, 8fnn:F, 8fnn:L, 8fno:F, 8fno:L, 8fnp:F, 8fnp:L, 8fnq:F, 8fnq:L, 6puw:F, 6puy:F, 6puz:F, 6v3k:F, 8w2r:O)
    cgggaaaatctctagca
    		 ? GO:0003676 ... P12497 38582148
    44152 8w2r:I
    (3.23)    		 BS03 >8w2r:N (identical to 9c9m:E, 9c9m:N, 8fn7:E, 8fn7:K, 8fnd:E, 8fnd:K, 8fng:E, 8fng:K, 8fnh:E, 8fnh:K, 8fnj:E, 8fnj:K, 8fnl:E, 8fnl:K, 8fnm:E, 8fnm:K, 8fnn:E, 8fnn:K, 8fno:E, 8fno:K, 8fnp:E, 8fnp:K, 8fnq:E, 8fnq:K, 6puw:E, 6puy:E, 6puz:E, 6v3k:E, 8w2r:E)
    actgctagagattttcccg
    		 ? GO:0003676 ... P12497 38582148
    44153 8w2r:I
    (3.23)    		 BS04 >8w2r:O (identical to 9c9m:F, 9c9m:O, 8fn7:F, 8fn7:L, 8fnd:F, 8fnd:L, 8fng:F, 8fng:L, 8fnh:F, 8fnh:L, 8fnj:F, 8fnj:L, 8fnl:F, 8fnl:L, 8fnm:F, 8fnm:L, 8fnn:F, 8fnn:L, 8fno:F, 8fno:L, 8fnp:F, 8fnp:L, 8fnq:F, 8fnq:L, 6puw:F, 6puy:F, 6puz:F, 6v3k:F, 8w2r:F)
    cgggaaaatctctagca
    		 ? GO:0003676 ... P12497 38582148
    44154 8w2r:L
    (3.23)    		 BS01 >8w2r:N (identical to 9c9m:E, 9c9m:N, 8fn7:E, 8fn7:K, 8fnd:E, 8fnd:K, 8fng:E, 8fng:K, 8fnh:E, 8fnh:K, 8fnj:E, 8fnj:K, 8fnl:E, 8fnl:K, 8fnm:E, 8fnm:K, 8fnn:E, 8fnn:K, 8fno:E, 8fno:K, 8fnp:E, 8fnp:K, 8fnq:E, 8fnq:K, 6puw:E, 6puy:E, 6puz:E, 6v3k:E, 8w2r:E)
    actgctagagattttcccg
    		 ? GO:0003676 ... P12497 38582148
    44155 8w2r:M
    (3.23)    		 BS01 >8w2r:F (identical to 9c9m:F, 9c9m:O, 8fn7:F, 8fn7:L, 8fnd:F, 8fnd:L, 8fng:F, 8fng:L, 8fnh:F, 8fnh:L, 8fnj:F, 8fnj:L, 8fnl:F, 8fnl:L, 8fnm:F, 8fnm:L, 8fnn:F, 8fnn:L, 8fno:F, 8fno:L, 8fnp:F, 8fnp:L, 8fnq:F, 8fnq:L, 6puw:F, 6puy:F, 6puz:F, 6v3k:F, 8w2r:O)
    cgggaaaatctctagca
    		 ? GO:0003676 ... P12497 38582148
    44156 8w2r:M
    (3.23)    		 BS02 >8w2r:N (identical to 9c9m:E, 9c9m:N, 8fn7:E, 8fn7:K, 8fnd:E, 8fnd:K, 8fng:E, 8fng:K, 8fnh:E, 8fnh:K, 8fnj:E, 8fnj:K, 8fnl:E, 8fnl:K, 8fnm:E, 8fnm:K, 8fnn:E, 8fnn:K, 8fno:E, 8fno:K, 8fnp:E, 8fnp:K, 8fnq:E, 8fnq:K, 6puw:E, 6puy:E, 6puz:E, 6v3k:E, 8w2r:E)
    actgctagagattttcccg
    		 ? GO:0003676 ... P12497 38582148
    44157 8w34:A
    (2.83)    		 BS01 >8w34:E (identical to 8w09:E, 8w09:N, 8w34:N)
    actgctagagattttccac
    		 ? GO:0003676 ... P12497 38582148
    44158 8w34:A
    (2.83)    		 BS02 >8w34:F (identical to 8w09:F, 8w09:O, 8w34:O)
    gtggaaaatctctagca
    		 ? GO:0003676 ... P12497 38582148
    44159 8w34:A
    (2.83)    		 BS03 >8w34:O (identical to 8w09:F, 8w09:O, 8w34:F)
    gtggaaaatctctagca
    		 ? GO:0003676 ... P12497 38582148
    44160 8w34:C
    (2.83)    		 BS01 >8w34:E (identical to 8w09:E, 8w09:N, 8w34:N)
    actgctagagattttccac
    		 ? GO:0003676 ... P12497 38582148
    44161 8w34:D
    (2.83)    		 BS01 >8w34:E (identical to 8w09:E, 8w09:N, 8w34:N)
    actgctagagattttccac
    		 ? GO:0003676 ... P12497 38582148
    44162 8w34:D
    (2.83)    		 BS02 >8w34:O (identical to 8w09:F, 8w09:O, 8w34:F)
    gtggaaaatctctagca
    		 ? GO:0003676 ... P12497 38582148
    44163 8w34:I
    (2.83)    		 BS01 >8w34:F (identical to 8w09:F, 8w09:O, 8w34:O)
    gtggaaaatctctagca
    		 ? GO:0003676 ... P12497 38582148
    44164 8w34:I
    (2.83)    		 BS02 >8w34:N (identical to 8w09:E, 8w09:N, 8w34:E)
    actgctagagattttccac
    		 ? GO:0003676 ... P12497 38582148
    44165 8w34:I
    (2.83)    		 BS03 >8w34:O (identical to 8w09:F, 8w09:O, 8w34:F)
    gtggaaaatctctagca
    		 ? GO:0003676 ... P12497 38582148
    44166 8w34:L
    (2.83)    		 BS01 >8w34:N (identical to 8w09:E, 8w09:N, 8w34:E)
    actgctagagattttccac
    		 ? GO:0003676 ... P12497 38582148
    44167 8w34:M
    (2.83)    		 BS01 >8w34:F (identical to 8w09:F, 8w09:O, 8w34:O)
    gtggaaaatctctagca
    		 ? GO:0003676 ... P12497 38582148
    44168 8w34:M
    (2.83)    		 BS02 >8w34:N (identical to 8w09:E, 8w09:N, 8w34:E)
    actgctagagattttccac
    		 ? GO:0003676 ... P12497 38582148
    44169 8w7m:3
    (4.12)    		 BS01 >8w7m:I (identical to 4bhm:G, 4bhm:H, 3gp8:X, 6s3o:B, 6s3p:B, 3upu:D, 3upu:E, 3upu:F)
    tttttttt
    		 3.6.4.12 GO:0000727 ... P24279 37730685
    44170 8w7m:4
    (4.12)    		 BS01 >8w7m:I (identical to 4bhm:G, 4bhm:H, 3gp8:X, 6s3o:B, 6s3p:B, 3upu:D, 3upu:E, 3upu:F)
    tttttttt
    		 3.6.4.12 GO:0000727 ... P30665 37730685
    44171 8w7m:7
    (4.12)    		 BS01 >8w7m:I (identical to 4bhm:G, 4bhm:H, 3gp8:X, 6s3o:B, 6s3p:B, 3upu:D, 3upu:E, 3upu:F)
    tttttttt
    		 3.6.4.12 GO:0000727 ... P38132 37730685
    44172 8w8e:A
    (3.9)    		 BS01 >8w8e:N (identical to 8w8f:N)
    ttgagagcggcggagccagcagggagctgggagc
    		 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38816438
    44173 8w8e:A
    (3.9)    		 BS03 >8w8e:T (identical to 8w8f:T)
    gctcccagctccctgctggctccgagtgggttctgccgctctcaa
    		 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38816438
    44174 8w8e:B
    (3.9)    		 BS02 >8w8e:T (identical to 8w8f:T)
    gctcccagctccctgctggctccgagtgggttctgccgctctcaa
    		 2.7.7.6 GO:0000428 ... I3LGP4 38816438
    44175 8w8e:E
    (3.9)    		 BS01 >8w8e:N (identical to 8w8f:N)
    ttgagagcggcggagccagcagggagctgggagc
    		 ? GO:0001054 ... I3LSI7 38816438
    44176 8w8e:Z
    (3.9)    		 BS01 >8w8e:T (identical to 8w8f:T)
    gctcccagctccctgctggctccgagtgggttctgccgctctcaa
    		 ? GO:0000122 ... O00267 38816438
    44177 8w8f:A
    (4.0)    		 BS01 >8w8f:N (identical to 8w8e:N)
    ttgagagcggcggagccagcagggagctgggagc
    		 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38816438
    44178 8w8f:A
    (4.0)    		 BS03 >8w8f:T (identical to 8w8e:T)
    gctcccagctccctgctggctccgagtgggttctgccgctctcaa
    		 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38816438
    44179 8w8f:B
    (4.0)    		 BS02 >8w8f:T (identical to 8w8e:T)
    gctcccagctccctgctggctccgagtgggttctgccgctctcaa
    		 2.7.7.6 GO:0000428 ... I3LGP4 38816438
    44180 8w8f:E
    (4.0)    		 BS01 >8w8f:N (identical to 8w8e:N)
    ttgagagcggcggagccagcagggagctgggagc
    		 ? GO:0001054 ... I3LSI7 38816438
    44181 8w8f:Z
    (4.0)    		 BS01 >8w8f:T (identical to 8w8e:T)
    gctcccagctccctgctggctccgagtgggttctgccgctctcaa
    		 ? GO:0000122 ... O00267 38816438
    44182 8w8n:C
    (2.693)    		 BS01 >8w8n:G
    catccgtgacaccagg
    		 N/A GO:0000428 ... Q8RQE9 38990947
    44183 8w8n:C
    (2.693)    		 BS02 >8w8n:H (identical to 7u22:H, 5uh5:H, 5uh6:H, 5uh8:H, 5uh9:H, 5uha:H, 5uhb:H, 5uhc:H, 5uhd:H, 5uhe:H, 5uhf:H, 5uhg:H)
    tataatgggagctgtcacggatg
    		 N/A GO:0000428 ... Q8RQE9 38990947
    44184 8w8n:D
    (2.693)    		 BS01 >8w8n:G
    catccgtgacaccagg
    		 N/A GO:0000287 ... Q8RQE8 38990947
    44185 8w8n:D
    (2.693)    		 BS02 >8w8n:H (identical to 7u22:H, 5uh5:H, 5uh6:H, 5uh8:H, 5uh9:H, 5uha:H, 5uhb:H, 5uhc:H, 5uhd:H, 5uhe:H, 5uhf:H, 5uhg:H)
    tataatgggagctgtcacggatg
    		 N/A GO:0000287 ... Q8RQE8 38990947
    44186 8w8n:F
    (2.693)    		 BS01 >8w8n:G
    catccgtgacaccagg
    		 N/A GO:0003677 ... Q5SKW1 38990947
    44187 8w8n:F
    (2.693)    		 BS02 >8w8n:H (identical to 7u22:H, 5uh5:H, 5uh6:H, 5uh8:H, 5uh9:H, 5uha:H, 5uhb:H, 5uhc:H, 5uhd:H, 5uhe:H, 5uhf:H, 5uhg:H)
    tataatgggagctgtcacggatg
    		 N/A GO:0003677 ... Q5SKW1 38990947
    44188 8w8o:C
    (2.512)    		 BS01 >8w8o:G
    gcatccgtgagtccaggg
    		 N/A GO:0000428 ... Q8RQE9 38990947
    44189 8w8o:C
    (2.512)    		 BS02 >8w8o:H (identical to 5e17:H, 4g7h:H, 4g7h:R, 4g7o:H, 4g7o:R, 4g7z:H, 4g7z:R, 6kqd:H, 6kqd:R, 6kqe:H, 6kqf:H, 6kqg:H, 6kqh:H, 6kql:H, 6kqm:H, 6kqn:H, 6l74:H, 6lts:H, 4oin:H, 4oio:H, 4oip:H, 4oiq:H, 4oir:H, 8w8p:H, 5x22:R)
    tataatgggagctgtcacggatgc
    		 N/A GO:0000428 ... Q8RQE9 38990947
    44190 8w8o:D
    (2.512)    		 BS01 >8w8o:G
    gcatccgtgagtccaggg
    		 N/A GO:0000287 ... Q8RQE8 38990947
    44191 8w8o:D
    (2.512)    		 BS02 >8w8o:H (identical to 5e17:H, 4g7h:H, 4g7h:R, 4g7o:H, 4g7o:R, 4g7z:H, 4g7z:R, 6kqd:H, 6kqd:R, 6kqe:H, 6kqf:H, 6kqg:H, 6kqh:H, 6kql:H, 6kqm:H, 6kqn:H, 6l74:H, 6lts:H, 4oin:H, 4oio:H, 4oip:H, 4oiq:H, 4oir:H, 8w8p:H, 5x22:R)
    tataatgggagctgtcacggatgc
    		 N/A GO:0000287 ... Q8RQE8 38990947
    44192 8w8o:F
    (2.512)    		 BS01 >8w8o:G
    gcatccgtgagtccaggg
    		 N/A GO:0003677 ... Q5SKW1 38990947
    44193 8w8o:F
    (2.512)    		 BS02 >8w8o:H (identical to 5e17:H, 4g7h:H, 4g7h:R, 4g7o:H, 4g7o:R, 4g7z:H, 4g7z:R, 6kqd:H, 6kqd:R, 6kqe:H, 6kqf:H, 6kqg:H, 6kqh:H, 6kql:H, 6kqm:H, 6kqn:H, 6l74:H, 6lts:H, 4oin:H, 4oio:H, 4oip:H, 4oiq:H, 4oir:H, 8w8p:H, 5x22:R)
    tataatgggagctgtcacggatgc
    		 N/A GO:0003677 ... Q5SKW1 38990947
    44194 8w8p:C
    (3.165)    		 BS01 >8w8p:G
    gcatccgtgagtccagg
    		 N/A GO:0000428 ... Q8RQE9 38990947
    44195 8w8p:C
    (3.165)    		 BS02 >8w8p:H (identical to 5e17:H, 4g7h:H, 4g7h:R, 4g7o:H, 4g7o:R, 4g7z:H, 4g7z:R, 6kqd:H, 6kqd:R, 6kqe:H, 6kqf:H, 6kqg:H, 6kqh:H, 6kql:H, 6kqm:H, 6kqn:H, 6l74:H, 6lts:H, 4oin:H, 4oio:H, 4oip:H, 4oiq:H, 4oir:H, 8w8o:H, 5x22:R)
    tataatgggagctgtcacggatgc
    		 N/A GO:0000428 ... Q8RQE9 38990947
    44196 8w8p:D
    (3.165)    		 BS01 >8w8p:G
    gcatccgtgagtccagg
    		 N/A GO:0000287 ... Q8RQE8 38990947
    44197 8w8p:D
    (3.165)    		 BS02 >8w8p:H (identical to 5e17:H, 4g7h:H, 4g7h:R, 4g7o:H, 4g7o:R, 4g7z:H, 4g7z:R, 6kqd:H, 6kqd:R, 6kqe:H, 6kqf:H, 6kqg:H, 6kqh:H, 6kql:H, 6kqm:H, 6kqn:H, 6l74:H, 6lts:H, 4oin:H, 4oio:H, 4oip:H, 4oiq:H, 4oir:H, 8w8o:H, 5x22:R)
    tataatgggagctgtcacggatgc
    		 N/A GO:0000287 ... Q8RQE8 38990947
    44198 8w8p:F
    (3.165)    		 BS01 >8w8p:G
    gcatccgtgagtccagg
    		 N/A GO:0003677 ... Q5SKW1 38990947
    44199 8w8p:F
    (3.165)    		 BS02 >8w8p:H (identical to 5e17:H, 4g7h:H, 4g7h:R, 4g7o:H, 4g7o:R, 4g7z:H, 4g7z:R, 6kqd:H, 6kqd:R, 6kqe:H, 6kqf:H, 6kqg:H, 6kqh:H, 6kql:H, 6kqm:H, 6kqn:H, 6l74:H, 6lts:H, 4oin:H, 4oio:H, 4oip:H, 4oiq:H, 4oir:H, 8w8o:H, 5x22:R)
    tataatgggagctgtcacggatgc
    		 N/A GO:0003677 ... Q5SKW1 38990947
    44200 8w9d:a
    (3.9)    		 BS01 >8w9d:i (identical to 5av5:I, 5av6:I, 5av8:I, 5av9:I, 5avb:I, 5avc:I, 3b6f:I, 3b6g:I, 8eue:I, 8euj:I, 1kx5:I, 3lja:I, 3mgp:I, 3mgq:I, 3mgr:I, 3mgs:I, 5omx:I, 2pyo:I, 8w9e:i, 8w9f:i, 4xzq:I, 4ys3:I, 4z66:I)
    atcaatatccacctgcagatactaccaaaagtgtatttggaaactgctcc
atcaaaaggcatgttcagctggaatccagctgaacatgccttttgatgga
gcagtttccaaatacacttttggtagtatctgcaggtggatattgat
    		 ? GO:0000786 ... P68431 38598631
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218