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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 45686 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • The sequence is converted from residues with experimentally determined coordinates in the structure; residues not observed in the 3D structure are excluded.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (resolution)     		Site
    #     		DNA
    sequence         		EC
    number     		GO
    terms     		UniProt PubMed Binding
    affinity
    301 1cgp:B
    (3.0)    		 BS03 >1cgp:F (identical to 1cgp:D)
    gtcacacttttcg
    		 ? GO:0003677 ... P0ACJ8 1653449
    302 1cit:A
    (2.7)    		 BS01 >1cit:B (identical to 7wnh:F, 7wnh:H, 7wnh:K, 7wnh:N)
    ccgaaaaggtcatgcg
    		 ? GO:0003700 ... P22829 10331876 PDBbind: Kd=1nM
    303 1cit:A
    (2.7)    		 BS02 >1cit:C (identical to 7wnh:E, 7wnh:I, 7wnh:L, 7wnh:O)
    cgcatgaccttttcgg
    		 ? GO:0003700 ... P22829 10331876 PDBbind: Kd=1nM
    304 1cjg:A
    (-1.00)    		 BS01 >1cjg:C (identical to 1cjg:D)
    gaattgtgagcgctcacaattc
    		 ? GO:0003677 ... P03023 10647179
    305 1cjg:A
    (-1.00)    		 BS02 >1cjg:D (identical to 1cjg:C)
    gaattgtgagcgctcacaattc
    		 ? GO:0003677 ... P03023 10647179
    306 1cjg:B
    (-1.00)    		 BS01 >1cjg:C (identical to 1cjg:D)
    gaattgtgagcgctcacaattc
    		 ? GO:0003677 ... P03023 10647179
    307 1cjg:B
    (-1.00)    		 BS02 >1cjg:D (identical to 1cjg:C)
    gaattgtgagcgctcacaattc
    		 ? GO:0003677 ... P03023 10647179
    308 1ckq:A
    (1.85)    		 BS01 >1ckq:B (identical to 1cl8:B, 1eri:B, 2oxv:C, 1qrh:M, 1qri:M)
    tcgcgaattcgcg
    		 3.1.21.4 GO:0000287 ... P00642 N/A
    309 1ckt:A
    (2.5)    		 BS01 >1ckt:B
    ccuctctggaccttcc
    		 ? GO:0003677 ... P63159 10385126
    310 1ckt:A
    (2.5)    		 BS02 >1ckt:C
    ggaaggtccagagagg
    		 ? GO:0003677 ... P63159 10385126
    311 1cl8:A
    (1.8)    		 BS01 >1cl8:B (identical to 1ckq:B, 1eri:B, 2oxv:C, 1qrh:M, 1qri:M)
    tcgcgaattcgcg
    		 3.1.21.4 GO:0000287 ... P00642 N/A
    312 1clq:A
    (2.7)    		 BS01 >1clq:E
    gcggaactact
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 10535734
    313 1clq:A
    (2.7)    		 BS02 >1clq:D
    agtagttccgcg
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 10535734
    314 1cma:A
    (2.8)    		 BS01 >1cma:D (identical to 1mjp:D)
    agacgtcta
    		 ? GO:0003677 ... P0A8U6 1406951
    315 1cma:B
    (2.8)    		 BS01 >1cma:C (identical to 1mjp:C)
    ttagacgtct
    		 ? GO:0003677 ... P0A8U6 1406951
    316 1co0:A
    (-1.00)    		 BS01 >1co0:E
    tgtactcgtgtactggtaca
    		 ? GO:0003677 ... P0A881 N/A
    317 1co0:A
    (-1.00)    		 BS02 >1co0:F
    tgtaccagtacacgagtaca
    		 ? GO:0003677 ... P0A881 N/A
    318 1co0:B
    (-1.00)    		 BS01 >1co0:E
    tgtactcgtgtactggtaca
    		 ? GO:0003677 ... P0A881 N/A
    319 1co0:B
    (-1.00)    		 BS02 >1co0:F
    tgtaccagtacacgagtaca
    		 ? GO:0003677 ... P0A881 N/A
    320 1cqt:A
    (3.2)    		 BS01 >1cqt:M (identical to 1oct:A)
    tgtatgcaaataagg
    		 ? GO:0000981 ... P14859 10541551
    321 1cqt:A
    (3.2)    		 BS02 >1cqt:N (identical to 1oct:B)
    accttatttgcatac
    		 ? GO:0000981 ... P14859 10541551
    322 1cqt:B
    (3.2)    		 BS01 >1cqt:O
    gtatgcaaataagg
    		 ? GO:0000981 ... P14859 10541551
    323 1cqt:B
    (3.2)    		 BS02 >1cqt:P
    ccttatttgcatac
    		 ? GO:0000981 ... P14859 10541551
    324 1crx:A
    (2.4)    		 BS01 >1crx:D (identical to 1crx:F, 1drg:C, 1f44:N)
    atatgctatacgaagttat
    		 ? GO:0003677 ... P06956 9288963
    325 1crx:A
    (2.4)    		 BS02 >1crx:E
    ataacttcgtatagc
    		 ? GO:0003677 ... P06956 9288963
    326 1crx:B
    (2.4)    		 BS01 >1crx:C (identical to 3mgv:E, 3mgv:G, 3mgv:I, 3mgv:L)
    tataacttcgtatag
    		 ? GO:0003677 ... P06956 9288963
    327 1crx:B
    (2.4)    		 BS02 >1crx:D (identical to 1crx:F, 1drg:C, 1f44:N)
    atatgctatacgaagttat
    		 ? GO:0003677 ... P06956 9288963
    328 1crx:B
    (2.4)    		 BS03 >1crx:F (identical to 1crx:D, 1drg:C, 1f44:N)
    atatgctatacgaagttat
    		 ? GO:0003677 ... P06956 9288963
    329 1cw0:A
    (2.3)    		 BS01 >1cw0:M
    acgtacctggct
    		 3.1.-.- GO:0003677 ... P09184 10612397
    330 1cw0:A
    (2.3)    		 BS02 >1cw0:N
    agc
    		 3.1.-.- GO:0003677 ... P09184 10612397
    331 1cw0:A
    (2.3)    		 BS03 >1cw0:O
    taggtacgt
    		 3.1.-.- GO:0003677 ... P09184 10612397
    332 1cyq:A
    (1.93)    		 BS01 >1cyq:C (identical to 1a74:C, 1a74:D, 1cyq:D, 1cz0:C, 1cz0:D, 1ipp:C, 1ipp:D, 2o6m:C, 2o6m:D, 8vmo:C, 8vmo:D, 8vmp:C, 8vmp:D, 8vmq:C, 8vmq:D, 8vmr:C, 8vmr:D, 8vms:C, 8vms:D, 8vmt:C, 8vmt:D, 8vmu:C, 8vmu:D, 8vmw:C, 8vmw:D, 8vmx:C, 8vmx:D, 8vmy:C, 8vmy:D, 8vmz:C, 8vmz:D, 8vn0:C, 8vn0:D, 8vn1:C, 8vn1:D, 8vn2:C, 8vn2:D, 8vn5:C, 8vn5:D, 8vn6:C, 8vn6:D, 8vn8:C, 8vn8:D, 8vn9:C, 8vn9:D, 8vna:C, 8vna:D, 8vne:C, 8vne:D, 8vnf:C, 8vnf:D, 8vng:C, 8vng:D, 8vnh:C, 8vnh:D, 8vnj:C, 8vnj:D, 8vnk:C, 8vnk:D, 8vnm:C, 8vnm:D, 8vnp:C, 8vnp:D, 8vnq:C, 8vnq:D, 8vnr:C, 8vnr:D, 8vnu:C, 8vnu:D)
    ttgactctcttaagagagtca
    		 3.1.-.- GO:0004519 ... Q94702 10581547
    333 1cyq:A
    (1.93)    		 BS02 >1cyq:D (identical to 1a74:C, 1a74:D, 1cyq:C, 1cz0:C, 1cz0:D, 1ipp:C, 1ipp:D, 2o6m:C, 2o6m:D, 8vmo:C, 8vmo:D, 8vmp:C, 8vmp:D, 8vmq:C, 8vmq:D, 8vmr:C, 8vmr:D, 8vms:C, 8vms:D, 8vmt:C, 8vmt:D, 8vmu:C, 8vmu:D, 8vmw:C, 8vmw:D, 8vmx:C, 8vmx:D, 8vmy:C, 8vmy:D, 8vmz:C, 8vmz:D, 8vn0:C, 8vn0:D, 8vn1:C, 8vn1:D, 8vn2:C, 8vn2:D, 8vn5:C, 8vn5:D, 8vn6:C, 8vn6:D, 8vn8:C, 8vn8:D, 8vn9:C, 8vn9:D, 8vna:C, 8vna:D, 8vne:C, 8vne:D, 8vnf:C, 8vnf:D, 8vng:C, 8vng:D, 8vnh:C, 8vnh:D, 8vnj:C, 8vnj:D, 8vnk:C, 8vnk:D, 8vnm:C, 8vnm:D, 8vnp:C, 8vnp:D, 8vnq:C, 8vnq:D, 8vnr:C, 8vnr:D, 8vnu:C, 8vnu:D)
    ttgactctcttaagagagtca
    		 3.1.-.- GO:0004519 ... Q94702 10581547
    334 1cyq:B
    (1.93)    		 BS01 >1cyq:C (identical to 1a74:C, 1a74:D, 1cyq:D, 1cz0:C, 1cz0:D, 1ipp:C, 1ipp:D, 2o6m:C, 2o6m:D, 8vmo:C, 8vmo:D, 8vmp:C, 8vmp:D, 8vmq:C, 8vmq:D, 8vmr:C, 8vmr:D, 8vms:C, 8vms:D, 8vmt:C, 8vmt:D, 8vmu:C, 8vmu:D, 8vmw:C, 8vmw:D, 8vmx:C, 8vmx:D, 8vmy:C, 8vmy:D, 8vmz:C, 8vmz:D, 8vn0:C, 8vn0:D, 8vn1:C, 8vn1:D, 8vn2:C, 8vn2:D, 8vn5:C, 8vn5:D, 8vn6:C, 8vn6:D, 8vn8:C, 8vn8:D, 8vn9:C, 8vn9:D, 8vna:C, 8vna:D, 8vne:C, 8vne:D, 8vnf:C, 8vnf:D, 8vng:C, 8vng:D, 8vnh:C, 8vnh:D, 8vnj:C, 8vnj:D, 8vnk:C, 8vnk:D, 8vnm:C, 8vnm:D, 8vnp:C, 8vnp:D, 8vnq:C, 8vnq:D, 8vnr:C, 8vnr:D, 8vnu:C, 8vnu:D)
    ttgactctcttaagagagtca
    		 3.1.-.- GO:0004519 ... Q94702 10581547
    335 1cyq:B
    (1.93)    		 BS02 >1cyq:D (identical to 1a74:C, 1a74:D, 1cyq:C, 1cz0:C, 1cz0:D, 1ipp:C, 1ipp:D, 2o6m:C, 2o6m:D, 8vmo:C, 8vmo:D, 8vmp:C, 8vmp:D, 8vmq:C, 8vmq:D, 8vmr:C, 8vmr:D, 8vms:C, 8vms:D, 8vmt:C, 8vmt:D, 8vmu:C, 8vmu:D, 8vmw:C, 8vmw:D, 8vmx:C, 8vmx:D, 8vmy:C, 8vmy:D, 8vmz:C, 8vmz:D, 8vn0:C, 8vn0:D, 8vn1:C, 8vn1:D, 8vn2:C, 8vn2:D, 8vn5:C, 8vn5:D, 8vn6:C, 8vn6:D, 8vn8:C, 8vn8:D, 8vn9:C, 8vn9:D, 8vna:C, 8vna:D, 8vne:C, 8vne:D, 8vnf:C, 8vnf:D, 8vng:C, 8vng:D, 8vnh:C, 8vnh:D, 8vnj:C, 8vnj:D, 8vnk:C, 8vnk:D, 8vnm:C, 8vnm:D, 8vnp:C, 8vnp:D, 8vnq:C, 8vnq:D, 8vnr:C, 8vnr:D, 8vnu:C, 8vnu:D)
    ttgactctcttaagagagtca
    		 3.1.-.- GO:0004519 ... Q94702 10581547
    336 1cz0:A
    (2.1)    		 BS01 >1cz0:C (identical to 1a74:C, 1a74:D, 1cyq:C, 1cyq:D, 1cz0:D, 1ipp:C, 1ipp:D, 2o6m:C, 2o6m:D, 8vmo:C, 8vmo:D, 8vmp:C, 8vmp:D, 8vmq:C, 8vmq:D, 8vmr:C, 8vmr:D, 8vms:C, 8vms:D, 8vmt:C, 8vmt:D, 8vmu:C, 8vmu:D, 8vmw:C, 8vmw:D, 8vmx:C, 8vmx:D, 8vmy:C, 8vmy:D, 8vmz:C, 8vmz:D, 8vn0:C, 8vn0:D, 8vn1:C, 8vn1:D, 8vn2:C, 8vn2:D, 8vn5:C, 8vn5:D, 8vn6:C, 8vn6:D, 8vn8:C, 8vn8:D, 8vn9:C, 8vn9:D, 8vna:C, 8vna:D, 8vne:C, 8vne:D, 8vnf:C, 8vnf:D, 8vng:C, 8vng:D, 8vnh:C, 8vnh:D, 8vnj:C, 8vnj:D, 8vnk:C, 8vnk:D, 8vnm:C, 8vnm:D, 8vnp:C, 8vnp:D, 8vnq:C, 8vnq:D, 8vnr:C, 8vnr:D, 8vnu:C, 8vnu:D)
    ttgactctcttaagagagtca
    		 3.1.-.- GO:0004519 ... Q94702 10581547
    337 1cz0:A
    (2.1)    		 BS02 >1cz0:D (identical to 1a74:C, 1a74:D, 1cyq:C, 1cyq:D, 1cz0:C, 1ipp:C, 1ipp:D, 2o6m:C, 2o6m:D, 8vmo:C, 8vmo:D, 8vmp:C, 8vmp:D, 8vmq:C, 8vmq:D, 8vmr:C, 8vmr:D, 8vms:C, 8vms:D, 8vmt:C, 8vmt:D, 8vmu:C, 8vmu:D, 8vmw:C, 8vmw:D, 8vmx:C, 8vmx:D, 8vmy:C, 8vmy:D, 8vmz:C, 8vmz:D, 8vn0:C, 8vn0:D, 8vn1:C, 8vn1:D, 8vn2:C, 8vn2:D, 8vn5:C, 8vn5:D, 8vn6:C, 8vn6:D, 8vn8:C, 8vn8:D, 8vn9:C, 8vn9:D, 8vna:C, 8vna:D, 8vne:C, 8vne:D, 8vnf:C, 8vnf:D, 8vng:C, 8vng:D, 8vnh:C, 8vnh:D, 8vnj:C, 8vnj:D, 8vnk:C, 8vnk:D, 8vnm:C, 8vnm:D, 8vnp:C, 8vnp:D, 8vnq:C, 8vnq:D, 8vnr:C, 8vnr:D, 8vnu:C, 8vnu:D)
    ttgactctcttaagagagtca
    		 3.1.-.- GO:0004519 ... Q94702 10581547
    338 1cz0:B
    (2.1)    		 BS01 >1cz0:C (identical to 1a74:C, 1a74:D, 1cyq:C, 1cyq:D, 1cz0:D, 1ipp:C, 1ipp:D, 2o6m:C, 2o6m:D, 8vmo:C, 8vmo:D, 8vmp:C, 8vmp:D, 8vmq:C, 8vmq:D, 8vmr:C, 8vmr:D, 8vms:C, 8vms:D, 8vmt:C, 8vmt:D, 8vmu:C, 8vmu:D, 8vmw:C, 8vmw:D, 8vmx:C, 8vmx:D, 8vmy:C, 8vmy:D, 8vmz:C, 8vmz:D, 8vn0:C, 8vn0:D, 8vn1:C, 8vn1:D, 8vn2:C, 8vn2:D, 8vn5:C, 8vn5:D, 8vn6:C, 8vn6:D, 8vn8:C, 8vn8:D, 8vn9:C, 8vn9:D, 8vna:C, 8vna:D, 8vne:C, 8vne:D, 8vnf:C, 8vnf:D, 8vng:C, 8vng:D, 8vnh:C, 8vnh:D, 8vnj:C, 8vnj:D, 8vnk:C, 8vnk:D, 8vnm:C, 8vnm:D, 8vnp:C, 8vnp:D, 8vnq:C, 8vnq:D, 8vnr:C, 8vnr:D, 8vnu:C, 8vnu:D)
    ttgactctcttaagagagtca
    		 3.1.-.- GO:0004519 ... Q94702 10581547
    339 1cz0:B
    (2.1)    		 BS02 >1cz0:D (identical to 1a74:C, 1a74:D, 1cyq:C, 1cyq:D, 1cz0:C, 1ipp:C, 1ipp:D, 2o6m:C, 2o6m:D, 8vmo:C, 8vmo:D, 8vmp:C, 8vmp:D, 8vmq:C, 8vmq:D, 8vmr:C, 8vmr:D, 8vms:C, 8vms:D, 8vmt:C, 8vmt:D, 8vmu:C, 8vmu:D, 8vmw:C, 8vmw:D, 8vmx:C, 8vmx:D, 8vmy:C, 8vmy:D, 8vmz:C, 8vmz:D, 8vn0:C, 8vn0:D, 8vn1:C, 8vn1:D, 8vn2:C, 8vn2:D, 8vn5:C, 8vn5:D, 8vn6:C, 8vn6:D, 8vn8:C, 8vn8:D, 8vn9:C, 8vn9:D, 8vna:C, 8vna:D, 8vne:C, 8vne:D, 8vnf:C, 8vnf:D, 8vng:C, 8vng:D, 8vnh:C, 8vnh:D, 8vnj:C, 8vnj:D, 8vnk:C, 8vnk:D, 8vnm:C, 8vnm:D, 8vnp:C, 8vnp:D, 8vnq:C, 8vnq:D, 8vnr:C, 8vnr:D, 8vnu:C, 8vnu:D)
    ttgactctcttaagagagtca
    		 3.1.-.- GO:0004519 ... Q94702 10581547
    340 1d02:A
    (1.7)    		 BS01 >1d02:C (identical to 1d02:D)
    gccaattggc
    		 3.1.21.4 GO:0003677 ... P43642 10545092
    341 1d02:A
    (1.7)    		 BS02 >1d02:D (identical to 1d02:C)
    gccaattggc
    		 3.1.21.4 GO:0003677 ... P43642 10545092
    342 1d02:B
    (1.7)    		 BS01 >1d02:C (identical to 1d02:D)
    gccaattggc
    		 3.1.21.4 GO:0003677 ... P43642 10545092
    343 1d02:B
    (1.7)    		 BS02 >1d02:D (identical to 1d02:C)
    gccaattggc
    		 3.1.21.4 GO:0003677 ... P43642 10545092
    344 1d0e:A
    (3.0)    		 BS01 >1d0e:E (identical to 1d0e:F)
    tttcatgcatg
    		 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-    		 N/A P03355 10669612
    345 1d0e:A
    (3.0)    		 BS02 >1d0e:F (identical to 1d0e:E)
    tttcatgcatg
    		 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-    		 N/A P03355 10669612
    346 1d1u:A
    (2.3)    		 BS01 >1d1u:B
    ctcgtg
    		 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-    		 N/A P03355 10957631
    347 1d1u:A
    (2.3)    		 BS02 >1d1u:C
    acggcacgag
    		 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-    		 N/A P03355 10957631
    348 1d2i:A
    (1.7)    		 BS01 >1d2i:C (identical to 1d2i:D, 1dfm:C, 1dfm:D)
    tattatagatctataa
    		 3.1.21.4 GO:0000287 ... Q45488 10655616
    349 1d2i:A
    (1.7)    		 BS02 >1d2i:D (identical to 1d2i:C, 1dfm:C, 1dfm:D)
    tattatagatctataa
    		 3.1.21.4 GO:0000287 ... Q45488 10655616
    350 1d2i:B
    (1.7)    		 BS01 >1d2i:C (identical to 1d2i:D, 1dfm:C, 1dfm:D)
    tattatagatctataa
    		 3.1.21.4 GO:0000287 ... Q45488 10655616
    351 1d2i:B
    (1.7)    		 BS02 >1d2i:D (identical to 1d2i:C, 1dfm:C, 1dfm:D)
    tattatagatctataa
    		 3.1.21.4 GO:0000287 ... Q45488 10655616
    352 1d3u:A
    (2.4)    		 BS01 >1d3u:C
    agagtaaagtttaaatacttatat
    		 ? GO:0003677 ... P62001 10570130
    353 1d3u:A
    (2.4)    		 BS02 >1d3u:D
    tataagtatttaaactttactct
    		 ? GO:0003677 ... P62001 10570130
    354 1d3u:B
    (2.4)    		 BS01 >1d3u:C
    agagtaaagtttaaatacttatat
    		 ? GO:0006352 ... P61999 10570130
    355 1d3u:B
    (2.4)    		 BS02 >1d3u:D
    tataagtatttaaactttactct
    		 ? GO:0006352 ... P61999 10570130
    356 1d5y:A
    (2.7)    		 BS01 >1d5y:M (identical to 1d5y:O)
    tgacagcactgaatgtcaaag
    		 ? GO:0003677 ... P0ACI0 10802742
    357 1d5y:A
    (2.7)    		 BS02 >1d5y:N (identical to 1d5y:P)
    actttgacattcagtgctgtc
    		 ? GO:0003677 ... P0ACI0 10802742
    358 1d5y:B
    (2.7)    		 BS01 >1d5y:M (identical to 1d5y:O)
    tgacagcactgaatgtcaaag
    		 ? GO:0003677 ... P0ACI0 10802742
    359 1d5y:B
    (2.7)    		 BS02 >1d5y:N (identical to 1d5y:P)
    actttgacattcagtgctgtc
    		 ? GO:0003677 ... P0ACI0 10802742
    360 1d5y:C
    (2.7)    		 BS01 >1d5y:O (identical to 1d5y:M)
    tgacagcactgaatgtcaaag
    		 ? GO:0003677 ... P0ACI0 10802742
    361 1d5y:C
    (2.7)    		 BS02 >1d5y:P (identical to 1d5y:N)
    actttgacattcagtgctgtc
    		 ? GO:0003677 ... P0ACI0 10802742
    362 1d5y:D
    (2.7)    		 BS01 >1d5y:O (identical to 1d5y:M)
    tgacagcactgaatgtcaaag
    		 ? GO:0003677 ... P0ACI0 10802742
    363 1d5y:D
    (2.7)    		 BS02 >1d5y:P (identical to 1d5y:N)
    actttgacattcagtgctgtc
    		 ? GO:0003677 ... P0ACI0 10802742
    364 1d66:A
    (2.7)    		 BS01 >1d66:D
    ccggaggacagtcctccgg
    		 ? GO:0000981 ... P04386 1557122
    365 1d66:A
    (2.7)    		 BS02 >1d66:E
    ccggaggactgtcctccgg
    		 ? GO:0000981 ... P04386 1557122
    366 1d66:B
    (2.7)    		 BS01 >1d66:D
    ccggaggacagtcctccgg
    		 ? GO:0000981 ... P04386 1557122
    367 1d66:B
    (2.7)    		 BS02 >1d66:E
    ccggaggactgtcctccgg
    		 ? GO:0000981 ... P04386 1557122
    368 1d8y:A
    (2.08)    		 BS01 >1d8y:B (identical to 4a76:F, 5chi:D, 5chi:E, 5chi:F, 5gkr:T, 4hqb:M, 6jiq:B, 1keg:A, 5odn:I, 5odn:M, 5odn:J, 5odn:K, 5odn:N, 5odn:Q, 5odp:O, 4pog:V, 4pso:X, 4pso:Z, 1rta:C, 4s0n:F, 4s0n:G, 4s0n:H, 3sz5:B, 3udg:F, 3vdy:C, 3vdy:E, 2vtb:K, 2vtb:L, 2y35:B, 4yox:B, 4yox:D, 4yox:F, 4yoy:B, 4yoy:D, 4yoy:F, 4z8f:E)
    tttt
    		 2.7.7.7 GO:0003676 ... P00582 10588690
    369 1d9f:A
    (3.0)    		 BS01 >1d9f:B
    tut
    		 2.7.7.7 GO:0003676 ... P00582 10588690
    370 1dc1:A
    (1.7)    		 BS01 >1dc1:W
    atactcgagtat
    		 3.1.21.4 GO:0003677 ... P70985 11250198
    371 1dc1:A
    (1.7)    		 BS02 >1dc1:C
    tatactcgagtat
    		 3.1.21.4 GO:0003677 ... P70985 11250198
    372 1dc1:B
    (1.7)    		 BS01 >1dc1:W
    atactcgagtat
    		 3.1.21.4 GO:0003677 ... P70985 11250198
    373 1dc1:B
    (1.7)    		 BS02 >1dc1:C
    tatactcgagtat
    		 3.1.21.4 GO:0003677 ... P70985 11250198
    374 1dct:A
    (2.8)    		 BS01 >1dct:F
    accagcaggccaccagtg
    		 2.1.1.37 GO:0003677 ... P20589 7606780
    375 1dct:A
    (2.8)    		 BS02 >1dct:M
    tcactggtggcctgctgg
    		 2.1.1.37 GO:0003677 ... P20589 7606780
    376 1dct:A
    (2.8)    		 BS03 >1dct:G
    cagcaggccaccagtg
    		 2.1.1.37 GO:0003677 ... P20589 7606780
    377 1dct:A
    (2.8)    		 BS04 >1dct:N
    tcactggtggcctgctg
    		 2.1.1.37 GO:0003677 ... P20589 7606780
    378 1dct:B
    (2.8)    		 BS01 >1dct:M
    tcactggtggcctgctgg
    		 2.1.1.37 GO:0003677 ... P20589 7606780
    379 1dct:B
    (2.8)    		 BS02 >1dct:G
    cagcaggccaccagtg
    		 2.1.1.37 GO:0003677 ... P20589 7606780
    380 1dct:B
    (2.8)    		 BS03 >1dct:N
    tcactggtggcctgctg
    		 2.1.1.37 GO:0003677 ... P20589 7606780
    381 1ddn:A
    (3.0)    		 BS01 >1ddn:E
    atataattaggatagctttacctaattatttta
    		 ? GO:0003677 ... P0DJL7 9697776
    382 1ddn:A
    (3.0)    		 BS02 >1ddn:F
    ttaaaataattaggtaaagctatcctaattata
    		 ? GO:0003677 ... P0DJL7 9697776
    383 1ddn:B
    (3.0)    		 BS01 >1ddn:E
    atataattaggatagctttacctaattatttta
    		 ? GO:0003677 ... P0DJL7 9697776
    384 1ddn:B
    (3.0)    		 BS02 >1ddn:F
    ttaaaataattaggtaaagctatcctaattata
    		 ? GO:0003677 ... P0DJL7 9697776
    385 1ddn:C
    (3.0)    		 BS01 >1ddn:E
    atataattaggatagctttacctaattatttta
    		 ? GO:0003677 ... P0DJL7 9697776
    386 1ddn:C
    (3.0)    		 BS02 >1ddn:F
    ttaaaataattaggtaaagctatcctaattata
    		 ? GO:0003677 ... P0DJL7 9697776
    387 1ddn:D
    (3.0)    		 BS01 >1ddn:E
    atataattaggatagctttacctaattatttta
    		 ? GO:0003677 ... P0DJL7 9697776
    388 1ddn:D
    (3.0)    		 BS02 >1ddn:F
    ttaaaataattaggtaaagctatcctaattata
    		 ? GO:0003677 ... P0DJL7 9697776
    389 1de8:A
    (2.95)    		 BS01 >1de8:U (identical to 4b21:X, 4b5f:U, 1de8:X)
    gctaccgatcg
    		 3.1.11.2
    3.1.21.-    		 GO:0003677 ... P27695 10667800
    390 1de8:A
    (2.95)    		 BS02 >1de8:V (identical to 4b5f:V, 1de8:Y, 4iem:G, 4iem:J, 4iem:M, 4iem:P)
    cgatcggtagc
    		 3.1.11.2
    3.1.21.-    		 GO:0003677 ... P27695 10667800
    391 1de8:B
    (2.95)    		 BS01 >1de8:X (identical to 4b21:X, 4b5f:U, 1de8:U)
    gctaccgatcg
    		 3.1.11.2
    3.1.21.-    		 GO:0003677 ... P27695 10667800
    392 1de8:B
    (2.95)    		 BS02 >1de8:Y (identical to 4b5f:V, 1de8:V, 4iem:G, 4iem:J, 4iem:M, 4iem:P)
    cgatcggtagc
    		 3.1.11.2
    3.1.21.-    		 GO:0003677 ... P27695 10667800
    393 1de9:A
    (3.0)    		 BS01 >1de9:X (identical to 1de9:U)
    ctac
    		 3.1.11.2
    3.1.21.-    		 GO:0003677 ... P27695 10667800
    394 1de9:A
    (3.0)    		 BS02 >1de9:Y (identical to 1de9:V, 4iem:I)
    cgatc
    		 3.1.11.2
    3.1.21.-    		 GO:0003677 ... P27695 10667800
    395 1de9:A
    (3.0)    		 BS03 >1de9:Z (identical to 1de9:W)
    gatcggtag
    		 3.1.11.2
    3.1.21.-    		 GO:0003677 ... P27695 10667800
    396 1de9:B
    (3.0)    		 BS01 >1de9:U (identical to 1de9:X)
    ctac
    		 3.1.11.2
    3.1.21.-    		 GO:0003677 ... P27695 10667800
    397 1de9:B
    (3.0)    		 BS02 >1de9:V (identical to 1de9:Y, 4iem:I)
    cgatc
    		 3.1.11.2
    3.1.21.-    		 GO:0003677 ... P27695 10667800
    398 1de9:B
    (3.0)    		 BS03 >1de9:W (identical to 1de9:Z)
    gatcggtag
    		 3.1.11.2
    3.1.21.-    		 GO:0003677 ... P27695 10667800
    399 1dew:A
    (2.65)    		 BS01 >1dew:U (identical to 1dew:X, 2nqj:C)
    gcgtccccgacgacg
    		 3.1.11.2
    3.1.21.-    		 GO:0003677 ... P27695 10667800
    400 1dew:A
    (2.65)    		 BS02 >1dew:V (identical to 1dew:Y)
    gtcgtcggggacgc
    		 3.1.11.2
    3.1.21.-    		 GO:0003677 ... P27695 10667800
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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