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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 45686 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • The sequence is converted from residues with experimentally determined coordinates in the structure; residues not observed in the 3D structure are excluded.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (resolution)     		Site
    #     		DNA
    sequence         		EC
    number     		GO
    terms     		UniProt PubMed Binding
    affinity
    2801 1vfc:A
    (-1.00)    		 BS02 >1vfc:C (identical to 1iv6:C)
    ccctaaccctaac
    		 ? GO:0000723 ... Q15554 15608118 PDBbind: Kd=0.75uM
    2802 1vkx:A
    (2.9)    		 BS01 >1vkx:C
    tggggactttcc
    		 ? GO:0003677 ... Q04207 9450761
    2803 1vkx:A
    (2.9)    		 BS02 >1vkx:D
    aggaaagtcccc
    		 ? GO:0003677 ... Q04207 9450761
    2804 1vkx:B
    (2.9)    		 BS01 >1vkx:C
    tggggactttcc
    		 ? GO:0003677 ... P25799 9450761
    2805 1vkx:B
    (2.9)    		 BS02 >1vkx:D
    aggaaagtcccc
    		 ? GO:0003677 ... P25799 9450761
    2806 1vol:A
    (2.7)    		 BS01 >1vol:C
    ggctataaaagggctg
    		 2.3.1.48 GO:0006352 ... Q00403 7675079
    2807 1vol:A
    (2.7)    		 BS02 >1vol:D
    cagcccttttatagcc
    		 2.3.1.48 GO:0006352 ... Q00403 7675079
    2808 1vol:B
    (2.7)    		 BS01 >1vol:C
    ggctataaaagggctg
    		 ? GO:0003677 ... P28147 7675079
    2809 1vol:B
    (2.7)    		 BS02 >1vol:D
    cagcccttttatagcc
    		 ? GO:0003677 ... P28147 7675079
    2810 1vpw:A
    (2.7)    		 BS01 >1vpw:B (identical to 1bdh:B, 1bdi:B, 1jfs:B, 1jft:B, 2pua:B, 2pub:B, 2puc:B, 2pud:B, 2pue:B, 2puf:B, 2pug:B, 1qpz:M)
    tacgcaaacgtttgcgt
    		 ? GO:0000976 ... P0ACP7 9628480
    2811 1vrl:A
    (2.5)    		 BS01 >1vrl:B (identical to 4dk9:B, 8dvp:B, 8dvy:B, 8dw0:B, 8dw4:B, 8dw7:B, 8dw7:E, 8dwd:B, 8dwe:B, 8dwe:E, 8dwf:B, 8dwf:E, 8fay:B, 8fay:E, 1orn:B, 6q0c:B, 1rrq:B, 1rrs:B, 6u7t:B, 4yoq:B, 4yph:B, 4ypr:D, 4ypr:F)
    aagacgtggac
    		 3.2.2.31 GO:0000701 ... P83847 14961129
    2812 1vrl:A
    (2.5)    		 BS02 >1vrl:C (identical to 1orn:C, 1orp:C, 6q0c:C, 1rrs:C, 6u7t:C, 4yoq:C, 4yph:C, 4ypr:C, 4ypr:E)
    gtccacgtct
    		 3.2.2.31 GO:0000701 ... P83847 14961129
    2813 1vrr:A
    (2.7)    		 BS01 >1vrr:C (identical to 1vrr:D)
    ttatagatctataa
    		 3.1.21.4 GO:0000287 ... Q84AF2 15893669
    2814 1vrr:A
    (2.7)    		 BS02 >1vrr:D (identical to 1vrr:C)
    ttatagatctataa
    		 3.1.21.4 GO:0000287 ... Q84AF2 15893669
    2815 1vrr:B
    (2.7)    		 BS01 >1vrr:C (identical to 1vrr:D)
    ttatagatctataa
    		 3.1.21.4 GO:0000287 ... Q84AF2 15893669
    2816 1vrr:B
    (2.7)    		 BS02 >1vrr:D (identical to 1vrr:C)
    ttatagatctataa
    		 3.1.21.4 GO:0000287 ... Q84AF2 15893669
    2817 1vtl:E
    (2.25)    		 BS01 >1vtl:A (identical to 1qne:C, 1qne:E, 6ueo:B, 6ueo:E, 6ueo:H, 6ueo:K, 1vtl:C, 1vto:C, 1vto:E)
    gctataaaagggca
    		 ? GO:0003677 ... P28147 8413605
    2818 1vtl:E
    (2.25)    		 BS02 >1vtl:B (identical to 1qne:D, 1qne:F, 6ueq:D, 1vtl:D, 1vto:D, 1vto:F)
    tgcccttttatagc
    		 ? GO:0003677 ... P28147 8413605
    2819 1vtl:F
    (2.25)    		 BS01 >1vtl:C (identical to 1qne:C, 1qne:E, 6ueo:B, 6ueo:E, 6ueo:H, 6ueo:K, 1vtl:A, 1vto:C, 1vto:E)
    gctataaaagggca
    		 ? GO:0003677 ... P28147 8413605
    2820 1vtl:F
    (2.25)    		 BS02 >1vtl:D (identical to 1qne:D, 1qne:F, 6ueq:D, 1vtl:B, 1vto:D, 1vto:F)
    tgcccttttatagc
    		 ? GO:0003677 ... P28147 8413605
    2821 1vtn:C
    (2.5)    		 BS01 >1vtn:A
    gactaagtcaacc
    		 ? GO:0003700 ... P55318 8332212
    2822 1vtn:C
    (2.5)    		 BS02 >1vtn:B
    ggttgacttagtc
    		 ? GO:0003700 ... P55318 8332212
    2823 1vto:A
    (1.9)    		 BS01 >1vto:C (identical to 1qne:C, 1qne:E, 6ueo:B, 6ueo:E, 6ueo:H, 6ueo:K, 1vtl:A, 1vtl:C, 1vto:E)
    gctataaaagggca
    		 ? GO:0003677 ... P28147 7634103
    2824 1vto:A
    (1.9)    		 BS02 >1vto:D (identical to 1qne:D, 1qne:F, 6ueq:D, 1vtl:B, 1vtl:D, 1vto:F)
    tgcccttttatagc
    		 ? GO:0003677 ... P28147 7634103
    2825 1vto:B
    (1.9)    		 BS01 >1vto:E (identical to 1qne:C, 1qne:E, 6ueo:B, 6ueo:E, 6ueo:H, 6ueo:K, 1vtl:A, 1vtl:C, 1vto:C)
    gctataaaagggca
    		 ? GO:0003677 ... P28147 7634103
    2826 1vto:B
    (1.9)    		 BS02 >1vto:F (identical to 1qne:D, 1qne:F, 6ueq:D, 1vtl:B, 1vtl:D, 1vto:D)
    tgcccttttatagc
    		 ? GO:0003677 ... P28147 7634103
    2827 1w0t:A
    (2.0)    		 BS01 >1w0t:C (identical to 4j19:C)
    ctgttagggttagggttag
    		 ? N/A P54274 15608617
    2828 1w0t:A
    (2.0)    		 BS02 >1w0t:D (identical to 4j19:D)
    tctaaccctaaccctaaca
    		 ? N/A P54274 15608617
    2829 1w0t:B
    (2.0)    		 BS01 >1w0t:C (identical to 4j19:C)
    ctgttagggttagggttag
    		 ? N/A P54274 15608617
    2830 1w0t:B
    (2.0)    		 BS02 >1w0t:D (identical to 4j19:D)
    tctaaccctaaccctaaca
    		 ? N/A P54274 15608617
    2831 1w0u:A
    (1.8)    		 BS01 >1w0u:C
    ctagggttagggttag
    		 ? GO:0000723 ... Q15554 15608617
    2832 1w0u:A
    (1.8)    		 BS02 >1w0u:D (identical to 3sjm:D)
    ctaaccctaaccctaga
    		 ? GO:0000723 ... Q15554 15608617
    2833 1w0u:B
    (1.8)    		 BS01 >1w0u:C
    ctagggttagggttag
    		 ? GO:0000723 ... Q15554 15608617
    2834 1w0u:B
    (1.8)    		 BS02 >1w0u:D (identical to 3sjm:D)
    ctaaccctaaccctaga
    		 ? GO:0000723 ... Q15554 15608617
    2835 1w36:B
    (3.1)    		 BS01 >1w36:Y (identical to 1w36:Z)
    tctaatgcgagcactgctatagcagtgctcgcattaga
    		 3.1.11.5
    5.6.2.4    		 GO:0000287 ... P08394 15538360
    2836 1w36:C
    (3.1)    		 BS01 >1w36:Y (identical to 1w36:Z)
    tctaatgcgagcactgctatagcagtgctcgcattaga
    		 3.1.11.5 GO:0000724 ... P07648 15538360
    2837 1w36:E
    (3.1)    		 BS01 >1w36:Z (identical to 1w36:Y)
    tctaatgcgagcactgctatagcagtgctcgcattaga
    		 3.1.11.5
    5.6.2.4    		 GO:0000287 ... P08394 15538360
    2838 1w36:F
    (3.1)    		 BS01 >1w36:Z (identical to 1w36:Y)
    tctaatgcgagcactgctatagcagtgctcgcattaga
    		 3.1.11.5 GO:0000724 ... P07648 15538360
    2839 1w36:G
    (3.1)    		 BS01 >1w36:Y (identical to 1w36:Z)
    tctaatgcgagcactgctatagcagtgctcgcattaga
    		 5.6.2.3 GO:0000724 ... P04993 15538360
    2840 1w7a:A
    (2.27)    		 BS01 >1w7a:E (identical to 1e3m:E, 3k0s:E, 1ng9:E, 1oh7:E, 1wb9:E, 1wbb:E, 1wbd:E)
    agctgccaggcaccagtg
    		 ? GO:0000018 ... P23909 15297450 PDBbind: Kd=7.5uM
    2841 1w7a:A
    (2.27)    		 BS02 >1w7a:F (identical to 1e3m:F, 3k0s:F, 1ng9:F, 1wb9:F, 1wbb:F, 1wbd:F, 3zlj:F)
    actggtgcttggcagct
    		 ? GO:0000018 ... P23909 15297450 PDBbind: Kd=7.5uM
    2842 1w7a:B
    (2.27)    		 BS01 >1w7a:E (identical to 1e3m:E, 3k0s:E, 1ng9:E, 1oh7:E, 1wb9:E, 1wbb:E, 1wbd:E)
    agctgccaggcaccagtg
    		 ? GO:0000018 ... P23909 15297450 PDBbind: Kd=7.5uM
    2843 1wb9:A
    (2.1)    		 BS01 >1wb9:E (identical to 1e3m:E, 3k0s:E, 1ng9:E, 1oh7:E, 1w7a:E, 1wbb:E, 1wbd:E)
    agctgccaggcaccagtg
    		 ? GO:0000018 ... P23909 16407973 PDBbind: Kd=0.018uM
    2844 1wb9:A
    (2.1)    		 BS02 >1wb9:F (identical to 1e3m:F, 3k0s:F, 1ng9:F, 1w7a:F, 1wbb:F, 1wbd:F, 3zlj:F)
    actggtgcttggcagct
    		 ? GO:0000018 ... P23909 16407973 PDBbind: Kd=0.018uM
    2845 1wb9:B
    (2.1)    		 BS01 >1wb9:E (identical to 1e3m:E, 3k0s:E, 1ng9:E, 1oh7:E, 1w7a:E, 1wbb:E, 1wbd:E)
    agctgccaggcaccagtg
    		 ? GO:0000018 ... P23909 16407973 PDBbind: Kd=0.018uM
    2846 1wb9:B
    (2.1)    		 BS02 >1wb9:F (identical to 1e3m:F, 3k0s:F, 1ng9:F, 1w7a:F, 1wbb:F, 1wbd:F, 3zlj:F)
    actggtgcttggcagct
    		 ? GO:0000018 ... P23909 16407973 PDBbind: Kd=0.018uM
    2847 1wbb:A
    (2.5)    		 BS01 >1wbb:E (identical to 1e3m:E, 3k0s:E, 1ng9:E, 1oh7:E, 1w7a:E, 1wb9:E, 1wbd:E)
    agctgccaggcaccagtg
    		 ? GO:0000018 ... P23909 16407973 PDBbind: Kd=0.020uM
    2848 1wbb:A
    (2.5)    		 BS02 >1wbb:F (identical to 1e3m:F, 3k0s:F, 1ng9:F, 1w7a:F, 1wb9:F, 1wbd:F, 3zlj:F)
    actggtgcttggcagct
    		 ? GO:0000018 ... P23909 16407973 PDBbind: Kd=0.020uM
    2849 1wbb:B
    (2.5)    		 BS01 >1wbb:E (identical to 1e3m:E, 3k0s:E, 1ng9:E, 1oh7:E, 1w7a:E, 1wb9:E, 1wbd:E)
    agctgccaggcaccagtg
    		 ? GO:0000018 ... P23909 16407973 PDBbind: Kd=0.020uM
    2850 1wbb:B
    (2.5)    		 BS02 >1wbb:F (identical to 1e3m:F, 3k0s:F, 1ng9:F, 1w7a:F, 1wb9:F, 1wbd:F, 3zlj:F)
    actggtgcttggcagct
    		 ? GO:0000018 ... P23909 16407973 PDBbind: Kd=0.020uM
    2851 1wbd:A
    (2.4)    		 BS01 >1wbd:E (identical to 1e3m:E, 3k0s:E, 1ng9:E, 1oh7:E, 1w7a:E, 1wb9:E, 1wbb:E)
    agctgccaggcaccagtg
    		 ? GO:0000018 ... P23909 16407973 PDBbind: Kd=2.4nM
    2852 1wbd:A
    (2.4)    		 BS02 >1wbd:F (identical to 1e3m:F, 3k0s:F, 1ng9:F, 1w7a:F, 1wb9:F, 1wbb:F, 3zlj:F)
    actggtgcttggcagct
    		 ? GO:0000018 ... P23909 16407973 PDBbind: Kd=2.4nM
    2853 1wbd:B
    (2.4)    		 BS01 >1wbd:E (identical to 1e3m:E, 3k0s:E, 1ng9:E, 1oh7:E, 1w7a:E, 1wb9:E, 1wbb:E)
    agctgccaggcaccagtg
    		 ? GO:0000018 ... P23909 16407973 PDBbind: Kd=2.4nM
    2854 1wbd:B
    (2.4)    		 BS02 >1wbd:F (identical to 1e3m:F, 3k0s:F, 1ng9:F, 1w7a:F, 1wb9:F, 1wbb:F, 3zlj:F)
    actggtgcttggcagct
    		 ? GO:0000018 ... P23909 16407973 PDBbind: Kd=2.4nM
    2855 1wd0:A
    (1.9)    		 BS01 >1wd0:B (identical to 1wd0:C, 1wvl:C, 1wvl:D)
    cctatatagg
    		 ? GO:0003677 ... P13123 15272160
    2856 1wd0:A
    (1.9)    		 BS02 >1wd0:C (identical to 1wd0:B, 1wvl:C, 1wvl:D)
    cctatatagg
    		 ? GO:0003677 ... P13123 15272160
    2857 1wd1:A
    (2.2)    		 BS01 >1wd1:B (identical to 1wd1:C)
    cctacgtagg
    		 ? GO:0003677 ... P13123 15272160
    2858 1wd1:A
    (2.2)    		 BS02 >1wd1:C (identical to 1wd1:B)
    cctacgtagg
    		 ? GO:0003677 ... P13123 15272160
    2859 1wet:A
    (2.6)    		 BS01 >1wet:B (identical to 1jh9:B, 1pnr:B)
    aacgaaaacgttttcgt
    		 ? GO:0000976 ... P0ACP7 9278422 PDBbind: Kd=1.5uM
    2860 1wtb:A
    (-1.00)    		 BS01 >1wtb:B (identical to 3nh1:E, 7u5c:H, 6w6w:E, 1x0f:B, 5ywv:C, 5ywv:D)
    tagg
    		 ? GO:0003676 ... Q14103 15734733
    2861 1wte:A
    (1.9)    		 BS01 >1wte:X
    accgggccctgcc
    		 3.1.21.4 N/A Q9RPJ3 15590682
    2862 1wte:A
    (1.9)    		 BS02 >1wte:Y
    ggcagggcccggt
    		 3.1.21.4 N/A Q9RPJ3 15590682
    2863 1wte:B
    (1.9)    		 BS01 >1wte:X
    accgggccctgcc
    		 3.1.21.4 N/A Q9RPJ3 15590682
    2864 1wte:B
    (1.9)    		 BS02 >1wte:Y
    ggcagggcccggt
    		 3.1.21.4 N/A Q9RPJ3 15590682
    2865 1wto:A
    (1.5)    		 BS01 >1wto:B (identical to 1azp:B, 1azp:C, 2dnj:B, 5hrg:C, 5hrg:D, 3kxt:B, 3kxt:C, 3lwi:C, 3lwi:D, 3lwi:E, 3lwi:F, 1oup:C, 1oup:D, 1oup:F, 1pt3:C, 1pt3:D, 1pt3:E, 1pt3:F, 1v14:F, 1v14:H, 1v14:J, 1v14:L, 1v15:F, 1v15:H, 1v15:J, 1v15:L, 1wto:C, 1wtr:B, 1wtr:C, 1wtw:B, 1wtw:C, 5wvz:C, 5wvz:D, 5wvz:E, 5wvz:F, 1xyi:B, 1xyi:C)
    gcgatcgc
    		 ? GO:0003677 ... P13123 15653643
    2866 1wto:A
    (1.5)    		 BS02 >1wto:C (identical to 1azp:B, 1azp:C, 2dnj:B, 5hrg:C, 5hrg:D, 3kxt:B, 3kxt:C, 3lwi:C, 3lwi:D, 3lwi:E, 3lwi:F, 1oup:C, 1oup:D, 1oup:F, 1pt3:C, 1pt3:D, 1pt3:E, 1pt3:F, 1v14:F, 1v14:H, 1v14:J, 1v14:L, 1v15:F, 1v15:H, 1v15:J, 1v15:L, 1wto:B, 1wtr:B, 1wtr:C, 1wtw:B, 1wtw:C, 5wvz:C, 5wvz:D, 5wvz:E, 5wvz:F, 1xyi:B, 1xyi:C)
    gcgatcgc
    		 ? GO:0003677 ... P13123 15653643
    2867 1wtp:A
    (1.9)    		 BS01 >1wtp:C (identical to 1wtp:D, 1wtp:E, 1wtp:F)
    gcgaucgc
    		 ? GO:0003677 ... P13123 15653643
    2868 1wtp:A
    (1.9)    		 BS02 >1wtp:D (identical to 1wtp:C, 1wtp:E, 1wtp:F)
    gcgaucgc
    		 ? GO:0003677 ... P13123 15653643
    2869 1wtp:A
    (1.9)    		 BS03 >1wtp:E (identical to 1wtp:C, 1wtp:D, 1wtp:F)
    gcgaucgc
    		 ? GO:0003677 ... P13123 15653643
    2870 1wtp:B
    (1.9)    		 BS01 >1wtp:E (identical to 1wtp:C, 1wtp:D, 1wtp:F)
    gcgaucgc
    		 ? GO:0003677 ... P13123 15653643
    2871 1wtp:B
    (1.9)    		 BS02 >1wtp:F (identical to 1wtp:C, 1wtp:D, 1wtp:E)
    gcgaucgc
    		 ? GO:0003677 ... P13123 15653643
    2872 1wtq:A
    (1.7)    		 BS01 >1wtq:B (identical to 1azq:B, 1azq:C, 1bnz:B, 1bnz:C, 3lwh:B, 3lwh:C, 1wtq:C, 1wtv:B, 1wtv:C, 1wtx:B, 1wtx:C, 5wwc:C, 5wwc:D, 5wwc:E, 5wwc:F)
    gtaattac
    		 ? GO:0003677 ... P13123 15653643
    2873 1wtq:A
    (1.7)    		 BS02 >1wtq:C (identical to 1azq:B, 1azq:C, 1bnz:B, 1bnz:C, 3lwh:B, 3lwh:C, 1wtq:B, 1wtv:B, 1wtv:C, 1wtx:B, 1wtx:C, 5wwc:C, 5wwc:D, 5wwc:E, 5wwc:F)
    gtaattac
    		 ? GO:0003677 ... P13123 15653643
    2874 1wtr:A
    (1.8)    		 BS01 >1wtr:B (identical to 1azp:B, 1azp:C, 2dnj:B, 5hrg:C, 5hrg:D, 3kxt:B, 3kxt:C, 3lwi:C, 3lwi:D, 3lwi:E, 3lwi:F, 1oup:C, 1oup:D, 1oup:F, 1pt3:C, 1pt3:D, 1pt3:E, 1pt3:F, 1v14:F, 1v14:H, 1v14:J, 1v14:L, 1v15:F, 1v15:H, 1v15:J, 1v15:L, 1wto:B, 1wto:C, 1wtr:C, 1wtw:B, 1wtw:C, 5wvz:C, 5wvz:D, 5wvz:E, 5wvz:F, 1xyi:B, 1xyi:C)
    gcgatcgc
    		 ? GO:0003677 ... P13123 15653643
    2875 1wtr:A
    (1.8)    		 BS02 >1wtr:C (identical to 1azp:B, 1azp:C, 2dnj:B, 5hrg:C, 5hrg:D, 3kxt:B, 3kxt:C, 3lwi:C, 3lwi:D, 3lwi:E, 3lwi:F, 1oup:C, 1oup:D, 1oup:F, 1pt3:C, 1pt3:D, 1pt3:E, 1pt3:F, 1v14:F, 1v14:H, 1v14:J, 1v14:L, 1v15:F, 1v15:H, 1v15:J, 1v15:L, 1wto:B, 1wto:C, 1wtr:B, 1wtw:B, 1wtw:C, 5wvz:C, 5wvz:D, 5wvz:E, 5wvz:F, 1xyi:B, 1xyi:C)
    gcgatcgc
    		 ? GO:0003677 ... P13123 15653643
    2876 1wtv:A
    (1.6)    		 BS01 >1wtv:B (identical to 1azq:B, 1azq:C, 1bnz:B, 1bnz:C, 3lwh:B, 3lwh:C, 1wtq:B, 1wtq:C, 1wtv:C, 1wtx:B, 1wtx:C, 5wwc:C, 5wwc:D, 5wwc:E, 5wwc:F)
    gtaattac
    		 ? GO:0003677 ... P13123 15653643
    2877 1wtv:A
    (1.6)    		 BS02 >1wtv:C (identical to 1azq:B, 1azq:C, 1bnz:B, 1bnz:C, 3lwh:B, 3lwh:C, 1wtq:B, 1wtq:C, 1wtv:B, 1wtx:B, 1wtx:C, 5wwc:C, 5wwc:D, 5wwc:E, 5wwc:F)
    gtaattac
    		 ? GO:0003677 ... P13123 15653643
    2878 1wtw:A
    (2.2)    		 BS01 >1wtw:B (identical to 1azp:B, 1azp:C, 2dnj:B, 5hrg:C, 5hrg:D, 3kxt:B, 3kxt:C, 3lwi:C, 3lwi:D, 3lwi:E, 3lwi:F, 1oup:C, 1oup:D, 1oup:F, 1pt3:C, 1pt3:D, 1pt3:E, 1pt3:F, 1v14:F, 1v14:H, 1v14:J, 1v14:L, 1v15:F, 1v15:H, 1v15:J, 1v15:L, 1wto:B, 1wto:C, 1wtr:B, 1wtr:C, 1wtw:C, 5wvz:C, 5wvz:D, 5wvz:E, 5wvz:F, 1xyi:B, 1xyi:C)
    gcgatcgc
    		 ? GO:0003677 ... P13123 15653643
    2879 1wtw:A
    (2.2)    		 BS02 >1wtw:C (identical to 1azp:B, 1azp:C, 2dnj:B, 5hrg:C, 5hrg:D, 3kxt:B, 3kxt:C, 3lwi:C, 3lwi:D, 3lwi:E, 3lwi:F, 1oup:C, 1oup:D, 1oup:F, 1pt3:C, 1pt3:D, 1pt3:E, 1pt3:F, 1v14:F, 1v14:H, 1v14:J, 1v14:L, 1v15:F, 1v15:H, 1v15:J, 1v15:L, 1wto:B, 1wto:C, 1wtr:B, 1wtr:C, 1wtw:B, 5wvz:C, 5wvz:D, 5wvz:E, 5wvz:F, 1xyi:B, 1xyi:C)
    gcgatcgc
    		 ? GO:0003677 ... P13123 15653643
    2880 1wtx:A
    (2.2)    		 BS01 >1wtx:B (identical to 1azq:B, 1azq:C, 1bnz:B, 1bnz:C, 3lwh:B, 3lwh:C, 1wtq:B, 1wtq:C, 1wtv:B, 1wtv:C, 1wtx:C, 5wwc:C, 5wwc:D, 5wwc:E, 5wwc:F)
    gtaattac
    		 ? GO:0003677 ... P13123 15653643
    2881 1wtx:A
    (2.2)    		 BS02 >1wtx:C (identical to 1azq:B, 1azq:C, 1bnz:B, 1bnz:C, 3lwh:B, 3lwh:C, 1wtq:B, 1wtq:C, 1wtv:B, 1wtv:C, 1wtx:B, 5wwc:C, 5wwc:D, 5wwc:E, 5wwc:F)
    gtaattac
    		 ? GO:0003677 ... P13123 15653643
    2882 1wvl:A
    (2.6)    		 BS01 >1wvl:C (identical to 1wd0:B, 1wd0:C, 1wvl:D)
    cctatatagg
    		 ? GO:0003677 ... P13123 16028219
    2883 1wvl:A
    (2.6)    		 BS02 >1wvl:D (identical to 1wd0:B, 1wd0:C, 1wvl:C)
    cctatatagg
    		 ? GO:0003677 ... P13123 16028219
    2884 1x0f:A
    (-1.00)    		 BS01 >1x0f:B (identical to 3nh1:E, 7u5c:H, 6w6w:E, 1wtb:B, 5ywv:C, 5ywv:D)
    tagg
    		 ? GO:0003676 ... Q14103 15734733
    2885 1x9m:A
    (2.1)    		 BS01 >1x9m:C
    gtagtgtgat
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15528277
    2886 1x9m:A
    (2.1)    		 BS02 >1x9m:D
    gatcacactacc
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15528277
    2887 1x9n:A
    (3.0)    		 BS01 >1x9n:B (identical to 6bkf:P, 6bkg:P, 6dt1:B, 6dt1:F, 7l34:B, 7l35:B, 6p09:B, 6p0a:B, 6p0b:B, 6p0c:B, 6p0d:B, 4pgy:P, 6q1v:B)
    gctgatgcgtc
    		 6.5.1.1 GO:0003677 ... P18858 15565146
    2888 1x9n:A
    (3.0)    		 BS02 >1x9n:C (identical to 3l2p:C)
    gtcggactg
    		 6.5.1.1 GO:0003677 ... P18858 15565146
    2889 1x9n:A
    (3.0)    		 BS03 >1x9n:D
    cagtccgacgacgcatcagc
    		 6.5.1.1 GO:0003677 ... P18858 15565146
    2890 1x9s:A
    (2.7)    		 BS01 >1x9s:P (identical to 1x9w:C)
    ggtagtgtgat
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15528277
    2891 1x9s:A
    (2.7)    		 BS02 >1x9s:T (identical to 1x9w:D)
    atcacactacc
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15528277
    2892 1x9w:A
    (2.3)    		 BS01 >1x9w:C (identical to 1x9s:P)
    ggtagtgtgat
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15528277
    2893 1x9w:A
    (2.3)    		 BS02 >1x9w:D (identical to 1x9s:T)
    atcacactacc
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15528277
    2894 1xbr:A
    (2.5)    		 BS01 >1xbr:C (identical to 4a04:E, 6f58:C, 6f58:D, 5t1j:C, 5t1j:D, 5t1j:E, 5t1j:F, 1xbr:D)
    aatttcacacctaggtgtgaaatt
    		 ? GO:0000978 ... P24781 9349824
    2895 1xbr:A
    (2.5)    		 BS02 >1xbr:D (identical to 4a04:E, 6f58:C, 6f58:D, 5t1j:C, 5t1j:D, 5t1j:E, 5t1j:F, 1xbr:C)
    aatttcacacctaggtgtgaaatt
    		 ? GO:0000978 ... P24781 9349824
    2896 1xbr:B
    (2.5)    		 BS01 >1xbr:C (identical to 4a04:E, 6f58:C, 6f58:D, 5t1j:C, 5t1j:D, 5t1j:E, 5t1j:F, 1xbr:D)
    aatttcacacctaggtgtgaaatt
    		 ? GO:0000978 ... P24781 9349824
    2897 1xbr:B
    (2.5)    		 BS02 >1xbr:D (identical to 4a04:E, 6f58:C, 6f58:D, 5t1j:C, 5t1j:D, 5t1j:E, 5t1j:F, 1xbr:C)
    aatttcacacctaggtgtgaaatt
    		 ? GO:0000978 ... P24781 9349824
    2898 1xc8:A
    (1.95)    		 BS01 >1xc8:B (identical to 3c58:B, 4cis:D, 6fl1:B, 6h0s:B, 4pdi:B, 1tdz:B)
    ctctttgtttctcg
    		 3.2.2.23
    4.2.99.18    		 GO:0003676 ... P42371 15249553 PDBbind: Kd=2.6nM
    2899 1xc8:A
    (1.95)    		 BS02 >1xc8:C (identical to 3c58:C, 4cis:C, 6fl1:C, 6h0s:C, 1nnj:E, 4pcz:C, 4pd2:C, 4pdg:C, 4pdi:C, 1pji:E, 1pjj:E, 1pm5:E, 6rnm:E, 6rno:E, 6rnr:E, 6ro2:C, 6rok:E, 6rp0:C, 6rp7:E, 1tdz:C, 2xzu:C)
    gcgagaaacaaaga
    		 3.2.2.23
    4.2.99.18    		 GO:0003676 ... P42371 15249553 PDBbind: Kd=2.6nM
    2900 1xc9:A
    (1.9)    		 BS01 >1xc9:B
    gggatggtgc
    		 2.7.7.7 GO:0003676 ... P52026 15548515
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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