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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 45686 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • The sequence is converted from residues with experimentally determined coordinates in the structure; residues not observed in the 3D structure are excluded.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (resolution)     		Site
    #     		DNA
    sequence         		EC
    number     		GO
    terms     		UniProt PubMed Binding
    affinity
    2501 1skn:P
    (2.5)    		 BS02 >1skn:B
    cagggatgacattgt
    		 ? GO:0000978 ... P34707 9628487
    2502 1skr:A
    (2.4)    		 BS01 >1skr:P (identical to 1t7p:P)
    gccagtgccaa
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15235589
    2503 1skr:A
    (2.4)    		 BS02 >1skr:T
    ctttggcactggc
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15235589
    2504 1sks:A
    (2.3)    		 BS01 >1sks:P (identical to 1sl0:P, 1sl0:Q)
    ggccagtgcct
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15235589
    2505 1sks:A
    (2.3)    		 BS02 >1sks:T
    taggcactggcc
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15235589
    2506 1skw:A
    (2.3)    		 BS01 >1skw:P
    cagtgcct
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15235589
    2507 1skw:A
    (2.3)    		 BS02 >1skw:T (identical to 1sl0:T, 1sl0:U)
    aggcactggc
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15235589
    2508 1sl0:A
    (3.2)    		 BS01 >1sl0:P (identical to 1sks:P, 1sl0:Q)
    ggccagtgcct
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15235589
    2509 1sl0:A
    (3.2)    		 BS02 >1sl0:T (identical to 1skw:T, 1sl0:U)
    aggcactggc
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15235589
    2510 1sl0:C
    (3.2)    		 BS01 >1sl0:Q (identical to 1sks:P, 1sl0:P)
    ggccagtgcct
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15235589
    2511 1sl0:C
    (3.2)    		 BS02 >1sl0:U (identical to 1skw:T, 1sl0:T)
    aggcactggc
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15235589
    2512 1sl1:A
    (2.2)    		 BS01 >1sl1:P (identical to 1sl2:P)
    cagtgccta
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15235589
    2513 1sl1:A
    (2.2)    		 BS02 >1sl1:T (identical to 1sl2:T)
    taggcactgg
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15235589
    2514 1sl2:A
    (2.3)    		 BS01 >1sl2:P (identical to 1sl1:P)
    cagtgccta
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15235589
    2515 1sl2:A
    (2.3)    		 BS02 >1sl2:T (identical to 1sl1:T)
    taggcactgg
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15235589
    2516 1srs:A
    (3.2)    		 BS01 >1srs:W
    ccutcctaattaggccatg
    		 ? GO:0000981 ... P11831 7637780
    2517 1srs:A
    (3.2)    		 BS02 >1srs:C
    ccatggcctaattaggaag
    		 ? GO:0000981 ... P11831 7637780
    2518 1srs:B
    (3.2)    		 BS01 >1srs:W
    ccutcctaattaggccatg
    		 ? GO:0000981 ... P11831 7637780
    2519 1srs:B
    (3.2)    		 BS02 >1srs:C
    ccatggcctaattaggaag
    		 ? GO:0000981 ... P11831 7637780
    2520 1ssp:E
    (1.9)    		 BS01 >1ssp:A (identical to 4yig:C, 4yig:G, 4yig:K)
    ctgtuatctt
    		 3.2.2.27 GO:0004844 ... P13051 9724657 PDBbind: Kd=48nM
    2521 1stx:A
    (2.1)    		 BS01 >1stx:C (identical to 5hlk:C, 5hlk:D, 1rvc:C, 1rvc:E, 1stx:E, 1sx5:C, 1sx5:E)
    aaagat
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2522 1stx:A
    (2.1)    		 BS02 >1stx:D (identical to 5hlk:E, 1rvc:D, 1rvc:F, 1stx:F, 1sx5:D, 1sx5:F)
    atctt
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2523 1stx:A
    (2.1)    		 BS03 >1stx:E (identical to 5hlk:C, 5hlk:D, 1rvc:C, 1rvc:E, 1stx:C, 1sx5:C, 1sx5:E)
    aaagat
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2524 1stx:A
    (2.1)    		 BS04 >1stx:F (identical to 5hlk:E, 1rvc:D, 1rvc:F, 1stx:D, 1sx5:D, 1sx5:F)
    atctt
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2525 1stx:B
    (2.1)    		 BS01 >1stx:C (identical to 5hlk:C, 5hlk:D, 1rvc:C, 1rvc:E, 1stx:E, 1sx5:C, 1sx5:E)
    aaagat
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2526 1stx:B
    (2.1)    		 BS02 >1stx:D (identical to 5hlk:E, 1rvc:D, 1rvc:F, 1stx:F, 1sx5:D, 1sx5:F)
    atctt
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2527 1stx:B
    (2.1)    		 BS03 >1stx:E (identical to 5hlk:C, 5hlk:D, 1rvc:C, 1rvc:E, 1stx:C, 1sx5:C, 1sx5:E)
    aaagat
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2528 1stx:B
    (2.1)    		 BS04 >1stx:F (identical to 5hlk:E, 1rvc:D, 1rvc:F, 1stx:D, 1sx5:D, 1sx5:F)
    atctt
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2529 1suz:A
    (1.8)    		 BS01 >1suz:C (identical to 1eo3:C, 1eo4:C, 1sx8:C)
    aagatatctt
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2530 1suz:A
    (1.8)    		 BS02 >1suz:D (identical to 1eo4:D, 1sx8:D)
    caagatatct
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2531 1suz:B
    (1.8)    		 BS01 >1suz:C (identical to 1eo3:C, 1eo4:C, 1sx8:C)
    aagatatctt
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2532 1suz:B
    (1.8)    		 BS02 >1suz:D (identical to 1eo4:D, 1sx8:D)
    caagatatct
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2533 1svc:P
    (2.6)    		 BS01 >1svc:D
    agatggggaatcccctaga
    		 ? GO:0003677 ... P19838 7830764
    2534 1sx5:A
    (1.5)    		 BS01 >1sx5:C (identical to 5hlk:C, 5hlk:D, 1rvc:C, 1rvc:E, 1stx:C, 1stx:E, 1sx5:E)
    aaagat
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2535 1sx5:A
    (1.5)    		 BS02 >1sx5:D (identical to 5hlk:E, 1rvc:D, 1rvc:F, 1stx:D, 1stx:F, 1sx5:F)
    atctt
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2536 1sx5:A
    (1.5)    		 BS03 >1sx5:E (identical to 5hlk:C, 5hlk:D, 1rvc:C, 1rvc:E, 1stx:C, 1stx:E, 1sx5:C)
    aaagat
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2537 1sx5:A
    (1.5)    		 BS04 >1sx5:F (identical to 5hlk:E, 1rvc:D, 1rvc:F, 1stx:D, 1stx:F, 1sx5:D)
    atctt
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2538 1sx5:B
    (1.5)    		 BS01 >1sx5:C (identical to 5hlk:C, 5hlk:D, 1rvc:C, 1rvc:E, 1stx:C, 1stx:E, 1sx5:E)
    aaagat
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2539 1sx5:B
    (1.5)    		 BS02 >1sx5:D (identical to 5hlk:E, 1rvc:D, 1rvc:F, 1stx:D, 1stx:F, 1sx5:F)
    atctt
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2540 1sx5:B
    (1.5)    		 BS03 >1sx5:E (identical to 5hlk:C, 5hlk:D, 1rvc:C, 1rvc:E, 1stx:C, 1stx:E, 1sx5:C)
    aaagat
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2541 1sx5:B
    (1.5)    		 BS04 >1sx5:F (identical to 5hlk:E, 1rvc:D, 1rvc:F, 1stx:D, 1stx:F, 1sx5:D)
    atctt
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2542 1sx8:A
    (2.15)    		 BS01 >1sx8:C (identical to 1eo3:C, 1eo4:C, 1suz:C)
    aagatatctt
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2543 1sx8:A
    (2.15)    		 BS02 >1sx8:D (identical to 1eo4:D, 1suz:D)
    caagatatct
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2544 1sx8:B
    (2.15)    		 BS01 >1sx8:C (identical to 1eo3:C, 1eo4:C, 1suz:C)
    aagatatctt
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2545 1sx8:B
    (2.15)    		 BS02 >1sx8:D (identical to 1eo4:D, 1suz:D)
    caagatatct
    		 3.1.21.4 GO:0003677 ... P04390 15170321
    2546 1sxp:A
    (2.5)    		 BS01 >1sxp:C (identical to 1ya6:C)
    atactaagatag
    		 2.4.1.27 GO:0006304 ... P04547 15178685
    2547 1sxp:A
    (2.5)    		 BS02 >1sxp:D (identical to 1y6g:D, 1ya6:D)
    ctatctgagtat
    		 2.4.1.27 GO:0006304 ... P04547 15178685
    2548 1sxp:B
    (2.5)    		 BS01 >1sxp:C (identical to 1ya6:C)
    atactaagatag
    		 2.4.1.27 GO:0006304 ... P04547 15178685
    2549 1sxp:B
    (2.5)    		 BS02 >1sxp:D (identical to 1y6g:D, 1ya6:D)
    ctatctgagtat
    		 2.4.1.27 GO:0006304 ... P04547 15178685
    2550 1sxq:A
    (1.8)    		 BS01 >1sxq:C (identical to 1sxq:D)
    aaaaaagtttttt
    		 2.4.1.27 GO:0006304 ... P04547 15178685
    2551 1sxq:A
    (1.8)    		 BS02 >1sxq:E (identical to 1sxq:F)
    aaaaaactttttt
    		 2.4.1.27 GO:0006304 ... P04547 15178685
    2552 1sxq:B
    (1.8)    		 BS01 >1sxq:D (identical to 1sxq:C)
    aaaaaagtttttt
    		 2.4.1.27 GO:0006304 ... P04547 15178685
    2553 1sxq:B
    (1.8)    		 BS02 >1sxq:F (identical to 1sxq:E)
    aaaaaactttttt
    		 2.4.1.27 GO:0006304 ... P04547 15178685
    2554 1t03:A
    (3.1)    		 BS01 >1t03:T (identical to 3klf:C, 3klf:G, 3klf:K, 3klf:O, 3klg:C, 3klg:G, 1n6q:T)
    gcatggcgcccgaacagggactg
    		 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 15107837
    2555 1t03:A
    (3.1)    		 BS02 >1t03:P (identical to 3klf:D, 3klf:H, 3klf:L, 3klf:P)
    cagtccctgttcgggcgcca
    		 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 15107837
    2556 1t05:A
    (3.0)    		 BS01 >1t05:T (identical to 7ahx:E, 7aif:E, 7aig:E, 7aii:E, 5j2m:T, 3jsm:T, 3jyt:T, 7ot6:T, 7ota:T, 7otk:T, 7otn:T, 7otx:T, 7otz:T, 7out:T, 5txl:T, 5txl:E, 5txm:T, 5txm:E, 5txn:T, 5txn:E, 5txo:T, 5txo:E, 5txp:T, 5txp:E)
    tggtcggcgcccgaacagggactg
    		 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 15107837
    2557 1t05:A
    (3.0)    		 BS02 >1t05:P (identical to 7ahx:P, 7ahx:F, 7aid:P, 7aid:F, 7aif:P, 7aif:F, 7aig:P, 7aig:F, 7aii:P, 7aii:F, 7aij:P, 7aij:F, 6amo:P, 6amo:F, 6an2:P, 6an2:F, 6an8:P, 6an8:F, 6anq:P, 6anq:F, 6asw:P, 6asw:F, 6avm:P, 6avm:F, 6avt:P, 6avt:F, 3jsm:P, 3jyt:P, 7ot6:F, 7ot6:P, 7ota:F, 7ota:P, 7otk:F, 7otk:P, 7otn:F, 7otn:P, 7otx:F, 7otx:P, 7otz:F, 7otz:P, 7out:F, 7out:P, 7oxq:F, 7oz5:F, 4r5p:P, 4r5p:F, 5txl:P, 5txl:F, 5txm:P, 5txm:F, 5txn:P, 5txn:F, 5txo:P, 5txo:F, 5txp:P, 5txp:F)
    cagtccctgttcgggcgccg
    		 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 15107837
    2558 1t2k:A
    (3.0)    		 BS01 >1t2k:E
    taaatgacataggaaaactgaaagggagaag
    		 ? GO:0000976 ... Q14653 15510218
    2559 1t2k:A
    (3.0)    		 BS02 >1t2k:F
    acttctccctttcagttttcctatgtcattt
    		 ? GO:0000976 ... Q14653 15510218
    2560 1t2k:B
    (3.0)    		 BS01 >1t2k:E
    taaatgacataggaaaactgaaagggagaag
    		 ? GO:0000976 ... Q14653 15510218
    2561 1t2k:B
    (3.0)    		 BS02 >1t2k:F
    acttctccctttcagttttcctatgtcattt
    		 ? GO:0000976 ... Q14653 15510218
    2562 1t2k:D
    (3.0)    		 BS01 >1t2k:E
    taaatgacataggaaaactgaaagggagaag
    		 ? GO:0003677 ... P15336 15510218
    2563 1t2k:D
    (3.0)    		 BS02 >1t2k:F
    acttctccctttcagttttcctatgtcattt
    		 ? GO:0003677 ... P15336 15510218
    2564 1t2s:A
    (-1.00)    		 BS01 >1t2s:B (identical to 2dwl:E, 2dwl:F)
    ac
    		 ? GO:0003723 ... Q9VUQ5 15156196
    2565 1t2t:A
    (2.5)    		 BS01 >1t2t:B
    tttgtaggactgccctttaat
    		 3.1.-.- GO:0003677 ... P13299 15361856 PDBbind: Kd=5.3nM
    2566 1t2t:A
    (2.5)    		 BS02 >1t2t:C
    aattaaagggcagtcctacaa
    		 3.1.-.- GO:0003677 ... P13299 15361856 PDBbind: Kd=5.3nM
    2567 1t38:A
    (3.2)    		 BS01 >1t38:B (identical to 4enj:B, 4enk:B, 4enn:C, 4enn:D, 4enn:E, 4enn:F, 3gx4:Y, 3gyh:Y, 4hdu:B, 4wx9:D)
    gccatggctagta
    		 2.1.1.63 GO:0003824 ... P16455 15221026
    2568 1t38:A
    (3.2)    		 BS02 >1t38:C (identical to 1t39:D, 1t39:F, 4wx9:E)
    tactagccatggc
    		 2.1.1.63 GO:0003824 ... P16455 15221026
    2569 1t39:A
    (3.3)    		 BS01 >1t39:C (identical to 4hdv:B, 1t39:E)
    gccatgactagta
    		 2.1.1.63 GO:0003824 ... P16455 15221026
    2570 1t39:A
    (3.3)    		 BS02 >1t39:D (identical to 1t38:C, 1t39:F, 4wx9:E)
    tactagccatggc
    		 2.1.1.63 GO:0003824 ... P16455 15221026
    2571 1t39:A
    (3.3)    		 BS03 >1t39:F (identical to 1t38:C, 1t39:D, 4wx9:E)
    tactagccatggc
    		 2.1.1.63 GO:0003824 ... P16455 15221026
    2572 1t39:B
    (3.3)    		 BS01 >1t39:E (identical to 4hdv:B, 1t39:C)
    gccatgactagta
    		 2.1.1.63 GO:0003824 ... P16455 15221026
    2573 1t39:B
    (3.3)    		 BS02 >1t39:F (identical to 1t38:C, 1t39:D, 4wx9:E)
    tactagccatggc
    		 2.1.1.63 GO:0003824 ... P16455 15221026
    2574 1t3n:A
    (2.3)    		 BS01 >1t3n:T
    agggtccttccccc
    		 2.7.7.7 GO:0003684 ... Q9UNA4 15254543
    2575 1t3n:A
    (2.3)    		 BS02 >1t3n:P (identical to 1zet:P)
    gggggaaggaccc
    		 2.7.7.7 GO:0003684 ... Q9UNA4 15254543
    2576 1t3n:B
    (2.3)    		 BS01 >1t3n:T
    agggtccttccccc
    		 2.7.7.7 GO:0003684 ... Q9UNA4 15254543
    2577 1t3n:B
    (2.3)    		 BS02 >1t3n:P (identical to 1zet:P)
    gggggaaggaccc
    		 2.7.7.7 GO:0003684 ... Q9UNA4 15254543
    2578 1t7p:A
    (2.2)    		 BS01 >1t7p:P (identical to 1skr:P)
    gccagtgccaa
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 9440688
    2579 1t7p:A
    (2.2)    		 BS02 >1t7p:T
    ccttggcactggc
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 9440688
    2580 1t8e:A
    (2.54)    		 BS01 >1t8e:C
    cgaaaacgacggccagtgccat
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15297882
    2581 1t8e:A
    (2.54)    		 BS02 >1t8e:D (identical to 2ajq:Z)
    tggatggcactggccgtcgttttcg
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P00581 15297882
    2582 1t8i:A
    (3.0)    		 BS01 >1t8i:B (identical to 2b9s:C, 1k4t:B, 1sc7:B, 1seu:B, 1tl8:B)
    aaaaagactt
    		 5.6.2.1 GO:0003677 ... P11387 15801827 PDBbind: IC50=0.3uM
    2583 1t8i:A
    (3.0)    		 BS02 >1t8i:C (identical to 1k4t:C, 1sc7:C, 1seu:C)
    ggaaaaattttt
    		 5.6.2.1 GO:0003677 ... P11387 15801827 PDBbind: IC50=0.3uM
    2584 1t8i:A
    (3.0)    		 BS03 >1t8i:D (identical to 1k4t:D, 1lpq:C, 1rr8:B, 1rrj:C, 1sc7:D, 1seu:D)
    aaaaatttttccaagtcttttt
    		 5.6.2.1 GO:0003677 ... P11387 15801827 PDBbind: IC50=0.3uM
    2585 1t9i:A
    (1.6)    		 BS01 >1t9i:C (identical to 1bp7:1, 1bp7:3, 1g9y:D, 1t9j:C)
    gcaaaacgtcgtgagacagtttcg
    		 3.1.-.- GO:0004519 ... P05725 15518550 PDBbind: Kd=1.8nM
    2586 1t9i:A
    (1.6)    		 BS02 >1t9i:D (identical to 1bp7:2, 1bp7:4, 1g9y:C, 1t9j:D)
    cgaaactgtctcacgacgttttgc
    		 3.1.-.- GO:0004519 ... P05725 15518550 PDBbind: Kd=1.8nM
    2587 1t9i:B
    (1.6)    		 BS01 >1t9i:C (identical to 1bp7:1, 1bp7:3, 1g9y:D, 1t9j:C)
    gcaaaacgtcgtgagacagtttcg
    		 3.1.-.- GO:0004519 ... P05725 15518550 PDBbind: Kd=1.8nM
    2588 1t9i:B
    (1.6)    		 BS02 >1t9i:D (identical to 1bp7:2, 1bp7:4, 1g9y:C, 1t9j:D)
    cgaaactgtctcacgacgttttgc
    		 3.1.-.- GO:0004519 ... P05725 15518550 PDBbind: Kd=1.8nM
    2589 1t9j:A
    (2.0)    		 BS01 >1t9j:C (identical to 1bp7:1, 1bp7:3, 1g9y:D, 1t9i:C)
    gcaaaacgtcgtgagacagtttcg
    		 3.1.-.- GO:0004519 ... P05725 15518550 PDBbind: Kd=0.6nM
    2590 1t9j:A
    (2.0)    		 BS02 >1t9j:D (identical to 1bp7:2, 1bp7:4, 1g9y:C, 1t9i:D)
    cgaaactgtctcacgacgttttgc
    		 3.1.-.- GO:0004519 ... P05725 15518550 PDBbind: Kd=0.6nM
    2591 1t9j:B
    (2.0)    		 BS01 >1t9j:C (identical to 1bp7:1, 1bp7:3, 1g9y:D, 1t9i:C)
    gcaaaacgtcgtgagacagtttcg
    		 3.1.-.- GO:0004519 ... P05725 15518550 PDBbind: Kd=0.6nM
    2592 1t9j:B
    (2.0)    		 BS02 >1t9j:D (identical to 1bp7:2, 1bp7:4, 1g9y:C, 1t9i:D)
    cgaaactgtctcacgacgttttgc
    		 3.1.-.- GO:0004519 ... P05725 15518550 PDBbind: Kd=0.6nM
    2593 1tau:A
    (3.0)    		 BS01 >1tau:T
    gcgatccg
    		 2.7.7.7 GO:0001882 ... P19821 8717047
    2594 1tau:A
    (3.0)    		 BS02 >1tau:P
    cggatcgc
    		 2.7.7.7 GO:0001882 ... P19821 8717047
    2595 1tc3:C
    (2.45)    		 BS01 >1tc3:A
    agggggggtcctatagaactt
    		 ? GO:0003677 ... P34257 9312061
    2596 1tc3:C
    (2.45)    		 BS02 >1tc3:B
    agttctataggaccccccct
    		 ? GO:0003677 ... P34257 9312061
    2597 1tdz:A
    (1.8)    		 BS01 >1tdz:B (identical to 3c58:B, 4cis:D, 6fl1:B, 6h0s:B, 4pdi:B, 1xc8:B)
    ctctttgtttctcg
    		 3.2.2.23
    4.2.99.18    		 GO:0003676 ... P42371 15249553 PDBbind: Kd=3nM
    2598 1tdz:A
    (1.8)    		 BS02 >1tdz:C (identical to 3c58:C, 4cis:C, 6fl1:C, 6h0s:C, 1nnj:E, 4pcz:C, 4pd2:C, 4pdg:C, 4pdi:C, 1pji:E, 1pjj:E, 1pm5:E, 6rnm:E, 6rno:E, 6rnr:E, 6ro2:C, 6rok:E, 6rp0:C, 6rp7:E, 1xc8:C, 2xzu:C)
    gcgagaaacaaaga
    		 3.2.2.23
    4.2.99.18    		 GO:0003676 ... P42371 15249553 PDBbind: Kd=3nM
    2599 1tez:A
    (1.8)    		 BS01 >1tez:I (identical to 1tez:K)
    atcggct
    		 4.1.99.3 GO:0000166 ... P05327 15576622
    2600 1tez:A
    (1.8)    		 BS02 >1tez:J (identical to 1tez:L)
    cgaagccga
    		 4.1.99.3 GO:0000166 ... P05327 15576622
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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