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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 45686 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • The sequence is converted from residues with experimentally determined coordinates in the structure; residues not observed in the 3D structure are excluded.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (resolution)     		Site
    #     		DNA
    sequence         		EC
    number     		GO
    terms     		UniProt PubMed Binding
    affinity
    2101 1q3u:A
    (2.9)    		 BS02 >1q3u:D (identical to 1nzb:D, 1nzb:H, 1ouq:D, 1ouq:H, 1q3u:H, 1q3v:D, 1q3v:H)
    ggataacttcgtatagcatacattatacgaagttatc
    		 ? GO:0003677 ... P06956 12954782
    2102 1q3u:B
    (2.9)    		 BS01 >1q3u:C (identical to 1nzb:C, 1nzb:G, 1q3u:G)
    cgataacutcgtataatgtatgctatacgaagttatc
    		 ? GO:0003677 ... P06956 12954782
    2103 1q3u:B
    (2.9)    		 BS02 >1q3u:D (identical to 1nzb:D, 1nzb:H, 1ouq:D, 1ouq:H, 1q3u:H, 1q3v:D, 1q3v:H)
    ggataacttcgtatagcatacattatacgaagttatc
    		 ? GO:0003677 ... P06956 12954782
    2104 1q3u:E
    (2.9)    		 BS01 >1q3u:G (identical to 1nzb:C, 1nzb:G, 1q3u:C)
    cgataacutcgtataatgtatgctatacgaagttatc
    		 ? GO:0003677 ... P06956 12954782
    2105 1q3u:E
    (2.9)    		 BS02 >1q3u:H (identical to 1nzb:D, 1nzb:H, 1ouq:D, 1ouq:H, 1q3u:D, 1q3v:D, 1q3v:H)
    ggataacttcgtatagcatacattatacgaagttatc
    		 ? GO:0003677 ... P06956 12954782
    2106 1q3u:F
    (2.9)    		 BS01 >1q3u:G (identical to 1nzb:C, 1nzb:G, 1q3u:C)
    cgataacutcgtataatgtatgctatacgaagttatc
    		 ? GO:0003677 ... P06956 12954782
    2107 1q3u:F
    (2.9)    		 BS02 >1q3u:H (identical to 1nzb:D, 1nzb:H, 1ouq:D, 1ouq:H, 1q3u:D, 1q3v:D, 1q3v:H)
    ggataacttcgtatagcatacattatacgaagttatc
    		 ? GO:0003677 ... P06956 12954782
    2108 1q3v:A
    (2.91)    		 BS01 >1q3v:X (identical to 1ouq:X, 1ouq:Y, 1q3v:Y)
    tgtatgctatacgaagttatc
    		 ? GO:0003677 ... P06956 12954782
    2109 1q3v:A
    (2.91)    		 BS02 >1q3v:D (identical to 1nzb:D, 1nzb:H, 1ouq:D, 1ouq:H, 1q3u:D, 1q3u:H, 1q3v:H)
    ggataacttcgtatagcatacattatacgaagttatc
    		 ? GO:0003677 ... P06956 12954782
    2110 1q3v:B
    (2.91)    		 BS01 >1q3v:C (identical to 1ouq:C, 1ouq:G, 1q3v:G)
    cgataacutcgtataa
    		 ? GO:0003677 ... P06956 12954782
    2111 1q3v:B
    (2.91)    		 BS02 >1q3v:X (identical to 1ouq:X, 1ouq:Y, 1q3v:Y)
    tgtatgctatacgaagttatc
    		 ? GO:0003677 ... P06956 12954782
    2112 1q3v:B
    (2.91)    		 BS03 >1q3v:D (identical to 1nzb:D, 1nzb:H, 1ouq:D, 1ouq:H, 1q3u:D, 1q3u:H, 1q3v:H)
    ggataacttcgtatagcatacattatacgaagttatc
    		 ? GO:0003677 ... P06956 12954782
    2113 1q3v:E
    (2.91)    		 BS01 >1q3v:Y (identical to 1ouq:X, 1ouq:Y, 1q3v:X)
    tgtatgctatacgaagttatc
    		 ? GO:0003677 ... P06956 12954782
    2114 1q3v:E
    (2.91)    		 BS02 >1q3v:H (identical to 1nzb:D, 1nzb:H, 1ouq:D, 1ouq:H, 1q3u:D, 1q3u:H, 1q3v:D)
    ggataacttcgtatagcatacattatacgaagttatc
    		 ? GO:0003677 ... P06956 12954782
    2115 1q3v:F
    (2.91)    		 BS01 >1q3v:G (identical to 1ouq:C, 1ouq:G, 1q3v:C)
    cgataacutcgtataa
    		 ? GO:0003677 ... P06956 12954782
    2116 1q3v:F
    (2.91)    		 BS02 >1q3v:Y (identical to 1ouq:X, 1ouq:Y, 1q3v:X)
    tgtatgctatacgaagttatc
    		 ? GO:0003677 ... P06956 12954782
    2117 1q3v:F
    (2.91)    		 BS03 >1q3v:H (identical to 1nzb:D, 1nzb:H, 1ouq:D, 1ouq:H, 1q3u:D, 1q3u:H, 1q3v:D)
    ggataacttcgtatagcatacattatacgaagttatc
    		 ? GO:0003677 ... P06956 12954782
    2118 1q9x:A
    (2.69)    		 BS01 >1q9x:E (identical to 1q9x:F, 1q9x:G, 1q9x:H)
    acggtaagcagtccgcgg
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=0.64uM
    2119 1q9x:A
    (2.69)    		 BS02 >1q9x:I (identical to 3cfr:P, 4dtr:P, 4dts:P, 4dtu:P, 4dtx:P, 4e3s:P, 4fjg:P, 4fji:P, 4fjj:P, 4fjk:P, 4fjl:P, 4fjm:P, 4fjn:P, 4fjx:P, 4fk0:P, 4fk2:P, 4fk4:P, 4i9q:P, 4i9q:C, 4j2a:P, 4khn:D, 4khn:F, 3lzi:P, 3lzj:P, 4m3u:P, 3nae:P, 3nci:P, 3ndk:P, 3ne6:P, 3ngi:P, 3nhg:P, 1q9x:J, 1q9x:K, 1q9x:L, 3qei:P, 3qep:P, 3qer:P, 3qes:P, 3qet:P, 3qev:P, 3qew:P, 3qex:P, 3qnn:P, 3qno:P, 3rwu:P, 3s9h:P, 3scx:P, 3si6:P, 3sjj:P, 3snn:P, 3spy:P, 3spz:P, 3sq0:P, 3sq1:P, 3uiq:P)
    gcggactgcttac
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=0.64uM
    2120 1q9x:A
    (2.69)    		 BS03 >1q9x:H (identical to 1q9x:E, 1q9x:F, 1q9x:G)
    acggtaagcagtccgcgg
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=0.64uM
    2121 1q9x:B
    (2.69)    		 BS01 >1q9x:F (identical to 1q9x:E, 1q9x:G, 1q9x:H)
    acggtaagcagtccgcgg
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=0.64uM
    2122 1q9x:B
    (2.69)    		 BS02 >1q9x:J (identical to 3cfr:P, 4dtr:P, 4dts:P, 4dtu:P, 4dtx:P, 4e3s:P, 4fjg:P, 4fji:P, 4fjj:P, 4fjk:P, 4fjl:P, 4fjm:P, 4fjn:P, 4fjx:P, 4fk0:P, 4fk2:P, 4fk4:P, 4i9q:P, 4i9q:C, 4j2a:P, 4khn:D, 4khn:F, 3lzi:P, 3lzj:P, 4m3u:P, 3nae:P, 3nci:P, 3ndk:P, 3ne6:P, 3ngi:P, 3nhg:P, 1q9x:I, 1q9x:K, 1q9x:L, 3qei:P, 3qep:P, 3qer:P, 3qes:P, 3qet:P, 3qev:P, 3qew:P, 3qex:P, 3qnn:P, 3qno:P, 3rwu:P, 3s9h:P, 3scx:P, 3si6:P, 3sjj:P, 3snn:P, 3spy:P, 3spz:P, 3sq0:P, 3sq1:P, 3uiq:P)
    gcggactgcttac
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=0.64uM
    2123 1q9x:C
    (2.69)    		 BS01 >1q9x:G (identical to 1q9x:E, 1q9x:F, 1q9x:H)
    acggtaagcagtccgcgg
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=0.64uM
    2124 1q9x:C
    (2.69)    		 BS02 >1q9x:K (identical to 3cfr:P, 4dtr:P, 4dts:P, 4dtu:P, 4dtx:P, 4e3s:P, 4fjg:P, 4fji:P, 4fjj:P, 4fjk:P, 4fjl:P, 4fjm:P, 4fjn:P, 4fjx:P, 4fk0:P, 4fk2:P, 4fk4:P, 4i9q:P, 4i9q:C, 4j2a:P, 4khn:D, 4khn:F, 3lzi:P, 3lzj:P, 4m3u:P, 3nae:P, 3nci:P, 3ndk:P, 3ne6:P, 3ngi:P, 3nhg:P, 1q9x:I, 1q9x:J, 1q9x:L, 3qei:P, 3qep:P, 3qer:P, 3qes:P, 3qet:P, 3qev:P, 3qew:P, 3qex:P, 3qnn:P, 3qno:P, 3rwu:P, 3s9h:P, 3scx:P, 3si6:P, 3sjj:P, 3snn:P, 3spy:P, 3spz:P, 3sq0:P, 3sq1:P, 3uiq:P)
    gcggactgcttac
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=0.64uM
    2125 1q9x:D
    (2.69)    		 BS01 >1q9x:H (identical to 1q9x:E, 1q9x:F, 1q9x:G)
    acggtaagcagtccgcgg
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=0.64uM
    2126 1q9x:D
    (2.69)    		 BS02 >1q9x:L (identical to 3cfr:P, 4dtr:P, 4dts:P, 4dtu:P, 4dtx:P, 4e3s:P, 4fjg:P, 4fji:P, 4fjj:P, 4fjk:P, 4fjl:P, 4fjm:P, 4fjn:P, 4fjx:P, 4fk0:P, 4fk2:P, 4fk4:P, 4i9q:P, 4i9q:C, 4j2a:P, 4khn:D, 4khn:F, 3lzi:P, 3lzj:P, 4m3u:P, 3nae:P, 3nci:P, 3ndk:P, 3ne6:P, 3ngi:P, 3nhg:P, 1q9x:I, 1q9x:J, 1q9x:K, 3qei:P, 3qep:P, 3qer:P, 3qes:P, 3qet:P, 3qev:P, 3qew:P, 3qex:P, 3qnn:P, 3qno:P, 3rwu:P, 3s9h:P, 3scx:P, 3si6:P, 3sjj:P, 3snn:P, 3spy:P, 3spz:P, 3sq0:P, 3sq1:P, 3uiq:P)
    gcggactgcttac
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=0.64uM
    2127 1q9y:A
    (2.8)    		 BS01 >1q9y:T
    acgggtaagcagtccgcg
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=20uM
    2128 1q9y:A
    (2.8)    		 BS02 >1q9y:P (identical to 3cfp:P, 3cq8:P, 1ig9:P, 4khq:P, 4khs:P, 4khu:P, 4khw:P, 4khy:P, 4ki4:P, 4ki6:P)
    gcggactgcttacc
    		 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 15057282 PDBbind: Kd=20uM
    2129 1qai:A
    (2.3)    		 BS01 >1qai:C (identical to 6bek:C, 6bek:F, 1qai:D, 1qaj:C, 1qaj:D)
    catgcatg
    		 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-    		 N/A P03355 10669612
    2130 1qai:A
    (2.3)    		 BS02 >1qai:D (identical to 6bek:C, 6bek:F, 1qai:C, 1qaj:C, 1qaj:D)
    catgcatg
    		 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-    		 N/A P03355 10669612
    2131 1qai:B
    (2.3)    		 BS01 >1qai:C (identical to 6bek:C, 6bek:F, 1qai:D, 1qaj:C, 1qaj:D)
    catgcatg
    		 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-    		 N/A P03355 10669612
    2132 1qai:B
    (2.3)    		 BS02 >1qai:D (identical to 6bek:C, 6bek:F, 1qai:C, 1qaj:C, 1qaj:D)
    catgcatg
    		 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-    		 N/A P03355 10669612
    2133 1qaj:A
    (2.3)    		 BS01 >1qaj:C (identical to 6bek:C, 6bek:F, 1qai:C, 1qai:D, 1qaj:D)
    catgcatg
    		 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-    		 N/A P03355 10669612
    2134 1qaj:A
    (2.3)    		 BS02 >1qaj:D (identical to 6bek:C, 6bek:F, 1qai:C, 1qai:D, 1qaj:C)
    catgcatg
    		 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-    		 N/A P03355 10669612
    2135 1qbj:A
    (2.1)    		 BS01 >1qbj:D (identical to 7c0i:D, 7c0i:E, 7c0j:D, 7c0j:E, 3eyi:C, 2heo:B, 2heo:E, 4ka4:C, 4ka4:G, 4ka4:H, 4lb6:C, 1qbj:E, 1qbj:F, 1sfu:C, 1sfu:D, 4wcg:C, 4wcg:D)
    cgcgcg
    		 3.5.4.37 GO:0003723 ... P55265 10364558
    2136 1qbj:B
    (2.1)    		 BS01 >1qbj:E (identical to 7c0i:D, 7c0i:E, 7c0j:D, 7c0j:E, 3eyi:C, 2heo:B, 2heo:E, 4ka4:C, 4ka4:G, 4ka4:H, 4lb6:C, 1qbj:D, 1qbj:F, 1sfu:C, 1sfu:D, 4wcg:C, 4wcg:D)
    cgcgcg
    		 3.5.4.37 GO:0003723 ... P55265 10364558
    2137 1qbj:C
    (2.1)    		 BS01 >1qbj:F (identical to 7c0i:D, 7c0i:E, 7c0j:D, 7c0j:E, 3eyi:C, 2heo:B, 2heo:E, 4ka4:C, 4ka4:G, 4ka4:H, 4lb6:C, 1qbj:D, 1qbj:E, 1sfu:C, 1sfu:D, 4wcg:C, 4wcg:D)
    cgcgcg
    		 3.5.4.37 GO:0003723 ... P55265 10364558
    2138 1qln:A
    (2.4)    		 BS01 >1qln:N (identical to 2pi4:P, 2pi5:P)
    taatacgactcact
    		 2.7.7.6 GO:0000428 ... P00573 10600732
    2139 1qln:A
    (2.4)    		 BS03 >1qln:T
    ctccctatagtgagtcgtatta
    		 2.7.7.6 GO:0000428 ... P00573 10600732
    2140 1qn3:A
    (1.95)    		 BS01 >1qn3:C (identical to 6njq:E, 6njq:C, 1qn3:E, 6uep:E, 6uep:C, 6uer:C, 6uer:E)
    gctataaacgggca
    		 ? GO:0003677 ... P28147 10617571
    2141 1qn3:A
    (1.95)    		 BS02 >1qn3:D (identical to 6njq:F, 6njq:D, 1qn3:F)
    tgcccgtttatagc
    		 ? GO:0003677 ... P28147 10617571
    2142 1qn3:B
    (1.95)    		 BS01 >1qn3:E (identical to 6njq:E, 6njq:C, 1qn3:C, 6uep:E, 6uep:C, 6uer:C, 6uer:E)
    gctataaacgggca
    		 ? GO:0003677 ... P28147 10617571
    2143 1qn3:B
    (1.95)    		 BS02 >1qn3:F (identical to 6njq:F, 6njq:D, 1qn3:D)
    tgcccgtttatagc
    		 ? GO:0003677 ... P28147 10617571
    2144 1qn4:A
    (1.86)    		 BS01 >1qn4:C (identical to 1qn4:E)
    gctataaaatggca
    		 ? GO:0003677 ... P28147 10617571
    2145 1qn4:A
    (1.86)    		 BS02 >1qn4:D (identical to 1qn4:F)
    tgccattttatagc
    		 ? GO:0003677 ... P28147 10617571
    2146 1qn4:B
    (1.86)    		 BS01 >1qn4:E (identical to 1qn4:C)
    gctataaaatggca
    		 ? GO:0003677 ... P28147 10617571
    2147 1qn4:B
    (1.86)    		 BS02 >1qn4:F (identical to 1qn4:D)
    tgccattttatagc
    		 ? GO:0003677 ... P28147 10617571
    2148 1qn5:A
    (1.93)    		 BS01 >1qn5:C (identical to 1qn5:E)
    gctataagagggca
    		 ? GO:0003677 ... P28147 10617571
    2149 1qn5:A
    (1.93)    		 BS02 >1qn5:D (identical to 1qn5:F)
    tgccctcttatagc
    		 ? GO:0003677 ... P28147 10617571
    2150 1qn5:B
    (1.93)    		 BS01 >1qn5:E (identical to 1qn5:C)
    gctataagagggca
    		 ? GO:0003677 ... P28147 10617571
    2151 1qn5:B
    (1.93)    		 BS02 >1qn5:F (identical to 1qn5:D)
    tgccctcttatagc
    		 ? GO:0003677 ... P28147 10617571
    2152 1qn6:A
    (2.1)    		 BS01 >1qn6:C (identical to 1qn6:E)
    gctataatagggca
    		 ? GO:0003677 ... P28147 10617571
    2153 1qn6:A
    (2.1)    		 BS02 >1qn6:D (identical to 1qn6:F)
    tgccctattatagc
    		 ? GO:0003677 ... P28147 10617571
    2154 1qn6:B
    (2.1)    		 BS01 >1qn6:E (identical to 1qn6:C)
    gctataatagggca
    		 ? GO:0003677 ... P28147 10617571
    2155 1qn6:B
    (2.1)    		 BS02 >1qn6:F (identical to 1qn6:D)
    tgccctattatagc
    		 ? GO:0003677 ... P28147 10617571
    2156 1qn7:A
    (2.3)    		 BS01 >1qn7:C (identical to 1qn7:E)
    gctatataagggca
    		 ? GO:0003677 ... P28147 10617571
    2157 1qn7:A
    (2.3)    		 BS02 >1qn7:D (identical to 1qn7:F)
    tgcccttatatagc
    		 ? GO:0003677 ... P28147 10617571
    2158 1qn7:B
    (2.3)    		 BS01 >1qn7:E (identical to 1qn7:C)
    gctatataagggca
    		 ? GO:0003677 ... P28147 10617571
    2159 1qn7:B
    (2.3)    		 BS02 >1qn7:F (identical to 1qn7:D)
    tgcccttatatagc
    		 ? GO:0003677 ... P28147 10617571
    2160 1qn8:A
    (2.1)    		 BS01 >1qn8:C (identical to 1qn8:E)
    gctattaaagggca
    		 ? GO:0003677 ... P28147 10617571
    2161 1qn8:A
    (2.1)    		 BS02 >1qn8:D (identical to 1qn8:F)
    tgccctttaatagc
    		 ? GO:0003677 ... P28147 10617571
    2162 1qn8:B
    (2.1)    		 BS01 >1qn8:E (identical to 1qn8:C)
    gctattaaagggca
    		 ? GO:0003677 ... P28147 10617571
    2163 1qn8:B
    (2.1)    		 BS02 >1qn8:F (identical to 1qn8:D)
    tgccctttaatagc
    		 ? GO:0003677 ... P28147 10617571
    2164 1qn9:A
    (1.9)    		 BS01 >1qn9:C (identical to 1qn9:E)
    gctacaaaagggca
    		 ? GO:0003677 ... P28147 10617571
    2165 1qn9:A
    (1.9)    		 BS02 >1qn9:D (identical to 1qn9:F)
    tgcccttttgtagc
    		 ? GO:0003677 ... P28147 10617571
    2166 1qn9:B
    (1.9)    		 BS01 >1qn9:E (identical to 1qn9:C)
    gctacaaaagggca
    		 ? GO:0003677 ... P28147 10617571
    2167 1qn9:B
    (1.9)    		 BS02 >1qn9:F (identical to 1qn9:D)
    tgcccttttgtagc
    		 ? GO:0003677 ... P28147 10617571
    2168 1qna:A
    (1.8)    		 BS01 >1qna:C (identical to 1qna:E)
    gctttaaaagggca
    		 ? GO:0003677 ... P28147 10617571
    2169 1qna:A
    (1.8)    		 BS02 >1qna:D (identical to 1qna:F)
    tgcccttttaaagc
    		 ? GO:0003677 ... P28147 10617571
    2170 1qna:B
    (1.8)    		 BS01 >1qna:E (identical to 1qna:C)
    gctttaaaagggca
    		 ? GO:0003677 ... P28147 10617571
    2171 1qna:B
    (1.8)    		 BS02 >1qna:F (identical to 1qna:D)
    tgcccttttaaagc
    		 ? GO:0003677 ... P28147 10617571
    2172 1qnb:A
    (2.23)    		 BS01 >1qnb:C (identical to 1qnb:E)
    gctataaatgggca
    		 ? GO:0003677 ... P28147 10617571
    2173 1qnb:A
    (2.23)    		 BS02 >1qnb:D (identical to 1qnb:F)
    tgcccatttatagc
    		 ? GO:0003677 ... P28147 10617571
    2174 1qnb:B
    (2.23)    		 BS01 >1qnb:E (identical to 1qnb:C)
    gctataaatgggca
    		 ? GO:0003677 ... P28147 10617571
    2175 1qnb:B
    (2.23)    		 BS02 >1qnb:F (identical to 1qnb:D)
    tgcccatttatagc
    		 ? GO:0003677 ... P28147 10617571
    2176 1qnc:A
    (2.3)    		 BS01 >1qnc:C (identical to 1qnc:E)
    gcaataaaagggca
    		 ? GO:0003677 ... P28147 10617571
    2177 1qnc:A
    (2.3)    		 BS02 >1qnc:D (identical to 1qnc:F)
    tgcccttttattgc
    		 ? GO:0003677 ... P28147 10617571
    2178 1qnc:B
    (2.3)    		 BS01 >1qnc:E (identical to 1qnc:C)
    gcaataaaagggca
    		 ? GO:0003677 ... P28147 10617571
    2179 1qnc:B
    (2.3)    		 BS02 >1qnc:F (identical to 1qnc:D)
    tgcccttttattgc
    		 ? GO:0003677 ... P28147 10617571
    2180 1qne:A
    (1.9)    		 BS01 >1qne:C (identical to 1qne:E, 6ueo:B, 6ueo:E, 6ueo:H, 6ueo:K, 1vtl:A, 1vtl:C, 1vto:C, 1vto:E)
    gctataaaagggca
    		 ? GO:0003677 ... P28147 10617571
    2181 1qne:A
    (1.9)    		 BS02 >1qne:D (identical to 1qne:F, 6ueq:D, 1vtl:B, 1vtl:D, 1vto:D, 1vto:F)
    tgcccttttatagc
    		 ? GO:0003677 ... P28147 10617571
    2182 1qne:B
    (1.9)    		 BS01 >1qne:E (identical to 1qne:C, 6ueo:B, 6ueo:E, 6ueo:H, 6ueo:K, 1vtl:A, 1vtl:C, 1vto:C, 1vto:E)
    gctataaaagggca
    		 ? GO:0003677 ... P28147 10617571
    2183 1qne:B
    (1.9)    		 BS02 >1qne:F (identical to 1qne:D, 6ueq:D, 1vtl:B, 1vtl:D, 1vto:D, 1vto:F)
    tgcccttttatagc
    		 ? GO:0003677 ... P28147 10617571
    2184 1qp0:A
    (2.9)    		 BS01 >1qp0:M (identical to 1qp7:M)
    tacgcaaccggttgcgt
    		 ? GO:0000976 ... P0ACP7 10438625 PDBbind: Kd=35nM
    2185 1qp4:A
    (3.0)    		 BS01 >1qp4:M (identical to 1qqb:M)
    tacgcaatcgattgcgt
    		 ? GO:0000976 ... P0ACP7 10438625 PDBbind: Kd=10nM
    2186 1qp7:A
    (2.9)    		 BS01 >1qp7:M (identical to 1qp0:M)
    tacgcaaccggttgcgt
    		 ? GO:0000976 ... P0ACP7 10438625 PDBbind: Kd=780nM
    2187 1qp9:A
    (2.8)    		 BS01 >1qp9:E (identical to 2hap:A, 1qp9:G)
    acgctattatcgctattagt
    		 ? GO:0000981 ... P0CS82 11024163 PDBbind: Kd=37.8nM
    2188 1qp9:A
    (2.8)    		 BS02 >1qp9:F (identical to 2hap:B)
    actaatagcgataatagcgt
    		 ? GO:0000981 ... P0CS82 11024163 PDBbind: Kd=37.8nM
    2189 1qp9:B
    (2.8)    		 BS01 >1qp9:E (identical to 2hap:A, 1qp9:G)
    acgctattatcgctattagt
    		 ? GO:0000981 ... P0CS82 11024163 PDBbind: Kd=37.8nM
    2190 1qp9:B
    (2.8)    		 BS02 >1qp9:F (identical to 2hap:B)
    actaatagcgataatagcgt
    		 ? GO:0000981 ... P0CS82 11024163 PDBbind: Kd=37.8nM
    2191 1qp9:C
    (2.8)    		 BS01 >1qp9:G (identical to 2hap:A, 1qp9:E)
    acgctattatcgctattagt
    		 ? GO:0000981 ... P0CS82 11024163 PDBbind: Kd=37.8nM
    2192 1qp9:C
    (2.8)    		 BS02 >1qp9:H
    taatagcgataatagcg
    		 ? GO:0000981 ... P0CS82 11024163 PDBbind: Kd=37.8nM
    2193 1qp9:D
    (2.8)    		 BS01 >1qp9:G (identical to 2hap:A, 1qp9:E)
    acgctattatcgctattagt
    		 ? GO:0000981 ... P0CS82 11024163 PDBbind: Kd=37.8nM
    2194 1qp9:D
    (2.8)    		 BS02 >1qp9:H
    taatagcgataatagcg
    		 ? GO:0000981 ... P0CS82 11024163 PDBbind: Kd=37.8nM
    2195 1qpi:A
    (2.5)    		 BS01 >1qpi:M
    cctatcaatgataga
    		 ? GO:0000976 ... P0ACT4 10700280
    2196 1qpi:A
    (2.5)    		 BS02 >1qpi:N
    tctatcattgatagg
    		 ? GO:0000976 ... P0ACT4 10700280
    2197 1qps:A
    (2.5)    		 BS01 >1qps:M
    tcgcg
    		 3.1.21.4 GO:0000287 ... P00642 N/A
    2198 1qps:A
    (2.5)    		 BS02 >1qps:N
    aattcgcg
    		 3.1.21.4 GO:0000287 ... P00642 N/A
    2199 1qpz:A
    (2.5)    		 BS01 >1qpz:M (identical to 1bdh:B, 1bdi:B, 1jfs:B, 1jft:B, 2pua:B, 2pub:B, 2puc:B, 2pud:B, 2pue:B, 2puf:B, 2pug:B, 1vpw:B)
    tacgcaaacgtttgcgt
    		 ? GO:0000976 ... P0ACP7 10438625 PDBbind: Kd=2.6nM
    2200 1qqa:A
    (3.0)    		 BS01 >1qqa:M
    tacgcaagcgcttgcgt
    		 ? GO:0000976 ... P0ACP7 10438625 PDBbind: Kd=400nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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