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BioLiP
Download all results in tab-seperated text for 51 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8j4z:A (2.73) BS02 TW3 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    2 8j4z:A (2.73) BS03 TW3 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    3 8j4z:C (2.73) BS02 TW3 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    4 8j4z:C (2.73) BS03 TW3 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    5 8j4z:F (2.73) BS02 TW3 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    6 8j4z:F (2.73) BS03 TW3 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    7 8j4z:H (2.73) BS02 TW3 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    8 8j4z:H (2.73) BS03 TW3 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    9 8j4z:J (2.73) BS02 TW3 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    10 8j4z:J (2.73) BS03 TW3 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    11 8j4z:K (2.73) BS02 TW3 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    12 8j4z:K (2.73) BS03 TW3 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    13 8j99:B (2.87) BS01 TW3 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    14 8j99:D (2.87) BS01 TW3 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    15 8j99:D (2.87) BS02 TW3 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    16 8j99:G (2.87) BS01 TW3 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    17 8j99:H (2.87) BS01 TW3 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    18 8j99:J (2.87) BS01 TW3 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    19 8j99:J (2.87) BS02 TW3 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    20 8j99:L (2.87) BS01 TW3 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    21 8jxl:A (2.98) BS01 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    22 8jxl:A (2.98) BS02 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    23 8jxl:B (2.98) BS01 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    24 8jxl:B (2.98) BS02 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    25 8jxl:D (2.98) BS01 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    26 8jxl:D (2.98) BS02 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    27 8jxl:G (2.98) BS01 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    28 8jxl:G (2.98) BS02 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    29 8jxl:I (2.98) BS01 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    30 8jxl:I (2.98) BS02 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    31 8jxl:K (2.98) BS01 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    32 8jxl:K (2.98) BS02 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    33 8jxm:A (3.49) BS01 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    34 8jxm:C (3.49) BS01 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    35 8jxm:C (3.49) BS03 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    36 8jxm:E (3.49) BS01 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    37 8jxm:H (3.49) BS01 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    38 8jxm:H (3.49) BS03 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    39 8jxm:J (3.49) BS01 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    40 8jxm:K (3.49) BS01 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    41 8jxn:A (3.2) BS01 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    42 8jxn:A (3.2) BS02 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    43 8jxn:B (3.2) BS02 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    44 8jxn:B (3.2) BS03 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    45 8jxn:D (3.2) BS02 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    46 8jxn:G (3.2) BS02 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    47 8jxn:G (3.2) BS03 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    48 8jxn:I (3.2) BS01 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    49 8jxn:I (3.2) BS02 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    50 8jxn:K (3.2) BS01 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    51 8jxn:K (3.2) BS02 TW3 N/A GO:0002169 ... Q9HCC0 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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