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BioLiP
Download all results in tab-seperated text for 20 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6o72:A (3.0) BS02 T14 N/A GO:0005216 ... N/A 31488702
    2 6o72:B (3.0) BS02 T14 N/A GO:0005216 ... N/A 31488702
    3 6o72:C (3.0) BS02 T14 N/A GO:0005216 ... N/A 31488702
    4 6o72:D (3.0) BS02 T14 N/A GO:0005216 ... N/A 31488702
    5 9b6e:A (2.91) BS02 T14 N/A N/A Q8R4D5 39093967
    6 9b6e:B (2.91) BS01 T14 N/A N/A Q8R4D5 39093967
    7 9b6e:C (2.91) BS01 T14 N/A N/A Q8R4D5 39093967
    8 9b6e:D (2.91) BS01 T14 N/A N/A Q8R4D5 39093967
    9 9b6h:A (2.76) BS04 T14 N/A N/A Q8R4D5 39093967
    10 9b6h:B (2.76) BS01 T14 N/A N/A Q8R4D5 39093967
    11 9b6h:C (2.76) BS01 T14 N/A N/A Q8R4D5 39093967
    12 9b6h:D (2.76) BS01 T14 N/A N/A Q8R4D5 39093967
    13 9b6i:A (3.26) BS04 T14 N/A N/A N/A 39093967
    14 9b6i:A (3.26) BS07 T14 N/A N/A N/A 39093967
    15 9b6i:B (3.26) BS02 T14 N/A N/A N/A 39093967
    16 9b6i:B (3.26) BS06 T14 N/A N/A N/A 39093967
    17 9b6i:C (3.26) BS02 T14 N/A N/A N/A 39093967
    18 9b6i:C (3.26) BS06 T14 N/A N/A N/A 39093967
    19 9b6i:D (3.26) BS04 T14 N/A N/A N/A 39093967
    20 9b6i:D (3.26) BS07 T14 N/A N/A N/A 39093967
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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