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BioLiP
Download all results in tab-seperated text for 8362 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1601 4kn9:T (1.4) BS02 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1602 4kn9:T (1.4) BS03 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1603 4ko1:L (1.55) BS01 SF4 1.18.99.1 GO:0008901 ... C7LN88 23811828
    1604 4ko1:M (1.55) BS01 SF4 1.18.99.1 GO:0008901 ... C7LN88 23811828
    1605 4ko1:S (1.55) BS01 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1606 4ko1:S (1.55) BS02 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1607 4ko1:S (1.55) BS03 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1608 4ko1:T (1.55) BS01 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1609 4ko1:T (1.55) BS02 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1610 4ko1:T (1.55) BS03 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1611 4ko2:L (1.6) BS01 SF4 1.18.99.1 GO:0008901 ... C7LN88 23811828
    1612 4ko2:M (1.6) BS01 SF4 1.18.99.1 GO:0008901 ... C7LN88 23811828
    1613 4ko2:S (1.6) BS01 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1614 4ko2:S (1.6) BS02 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1615 4ko2:S (1.6) BS03 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1616 4ko2:T (1.6) BS01 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1617 4ko2:T (1.6) BS02 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1618 4ko2:T (1.6) BS03 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1619 4ko3:L (1.7) BS01 SF4 1.18.99.1 GO:0008901 ... C7LN88 23811828
    1620 4ko3:M (1.7) BS01 SF4 1.18.99.1 GO:0008901 ... C7LN88 23811828
    1621 4ko3:S (1.7) BS01 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1622 4ko3:S (1.7) BS02 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1623 4ko3:S (1.7) BS03 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1624 4ko3:T (1.7) BS01 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1625 4ko3:T (1.7) BS02 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1626 4ko3:T (1.7) BS03 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1627 4ko4:L (2.0) BS01 SF4 1.18.99.1 GO:0008901 ... C7LN88 23811828
    1628 4ko4:M (2.0) BS01 SF4 1.18.99.1 GO:0008901 ... C7LN88 23811828
    1629 4ko4:S (2.0) BS01 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1630 4ko4:S (2.0) BS02 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1631 4ko4:S (2.0) BS03 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1632 4ko4:T (2.0) BS01 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1633 4ko4:T (2.0) BS02 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1634 4ko4:T (2.0) BS03 SF4 1.12.99.6 GO:0008901 ... P13063 23811828
    1635 4kt0:A (2.8) BS02 SF4 1.97.1.12 GO:0000287 ... P29254 24473073
    1636 4kt0:B (2.8) BS01 SF4 1.97.1.12 GO:0000287 ... P29255 24473073
    1637 4kt0:C (2.8) BS01 SF4 1.97.1.12 GO:0009055 ... P32422 24473073
    1638 4kt0:C (2.8) BS02 SF4 1.97.1.12 GO:0009055 ... P32422 24473073
    1639 4kx6:B (2.95) BS03 SF4 N/A GO:0006099 ... N/A 23836905
    1640 4kx6:N (2.95) BS03 SF4 N/A GO:0006099 ... N/A 23836905
    1641 4l6v:1 (3.8) BS03 SF4 1.97.1.12 GO:0000287 ... P29254 24473073
    1642 4l6v:2 (3.8) BS01 SF4 1.97.1.12 GO:0000287 ... P29255 24473073
    1643 4l6v:3 (3.8) BS01 SF4 1.97.1.12 GO:0009055 ... P32422 24473073
    1644 4l6v:3 (3.8) BS02 SF4 1.97.1.12 GO:0009055 ... P32422 24473073
    1645 4l6v:A (3.8) BS03 SF4 1.97.1.12 GO:0000287 ... P29254 24473073
    1646 4l6v:B (3.8) BS01 SF4 1.97.1.12 GO:0000287 ... P29255 24473073
    1647 4l6v:C (3.8) BS01 SF4 1.97.1.12 GO:0009055 ... P32422 24473073
    1648 4l6v:C (3.8) BS02 SF4 1.97.1.12 GO:0009055 ... P32422 24473073
    1649 4l6v:a (3.8) BS03 SF4 1.97.1.12 GO:0000287 ... P29254 24473073
    1650 4l6v:b (3.8) BS01 SF4 1.97.1.12 GO:0000287 ... P29255 24473073
    1651 4l6v:c (3.8) BS01 SF4 1.97.1.12 GO:0009055 ... P32422 24473073
    1652 4l6v:c (3.8) BS02 SF4 1.97.1.12 GO:0009055 ... P32422 24473073
    1653 4m7s:A (2.022) BS01 SF4 1.1.99.38 GO:0003824 ... Q8G907 24048029
    1654 4m7s:A (2.022) BS02 SF4 1.1.99.38 GO:0003824 ... Q8G907 24048029
    1655 4m7t:A (1.56) BS01 SF4 1.1.99.38 GO:0003824 ... Q8G907 24048029
    1656 4m7t:A (1.56) BS02 SF4 1.1.99.38 GO:0003824 ... Q8G907 24048029
    1657 4mux:A (1.7) BS01 SF4 N/A GO:0019288 ... N/A 24813236
    1658 4mux:B (1.7) BS01 SF4 N/A GO:0019288 ... N/A 24813236
    1659 4njg:A (2.598) BS01 SF4 4.3.99.3 GO:0000287 ... A0A0H3KB22 24362703
    1660 4njg:B (2.598) BS01 SF4 4.3.99.3 GO:0000287 ... A0A0H3KB22 24362703
    1661 4njh:A (1.898) BS01 SF4 4.3.99.3 GO:0000287 ... A0A0H3KB22 24362703
    1662 4njh:B (1.898) BS01 SF4 4.3.99.3 GO:0000287 ... A0A0H3KB22 24362703
    1663 4nji:A (2.197) BS01 SF4 4.3.99.3 GO:0000287 ... A0A0H3KB22 24362703
    1664 4nji:B (2.197) BS01 SF4 4.3.99.3 GO:0000287 ... A0A0H3KB22 24362703
    1665 4njj:A (2.7) BS01 SF4 4.3.99.3 GO:0000287 ... A0A0H3KB22 24362703
    1666 4njj:B (2.7) BS01 SF4 4.3.99.3 GO:0000287 ... A0A0H3KB22 24362703
    1667 4njk:A (1.911) BS01 SF4 4.3.99.3 GO:0000287 ... A0A0H3KB22 24362703
    1668 4njk:B (1.911) BS01 SF4 4.3.99.3 GO:0000287 ... A0A0H3KB22 24362703
    1669 4omf:A (1.71) BS01 SF4 1.12.98.1 GO:0008901 ... D9PYF9 24887099
    1670 4omf:B (1.71) BS01 SF4 1.12.98.1 GO:0000166 ... D9PYF6 24887099
    1671 4omf:G (1.71) BS01 SF4 1.12.98.1 GO:0016151 ... D9PYF7 24887099
    1672 4omf:G (1.71) BS02 SF4 1.12.98.1 GO:0016151 ... D9PYF7 24887099
    1673 4omf:G (1.71) BS03 SF4 1.12.98.1 GO:0016151 ... D9PYF7 24887099
    1674 4p3x:A (1.65) BS01 SF4 2.5.1.72 GO:0005737 ... Q9X1X7 24650327
    1675 4pkf:B (2.002) BS01 SF4 4.1.99.11 GO:0046872 ... O68396 24982148
    1676 4pl1:A (2.58) BS02 SF4 N/A GO:0003824 ... N/A 24806349
    1677 4pl1:B (2.58) BS02 SF4 N/A GO:0003824 ... N/A 24806349
    1678 4pl2:A (2.2) BS01 SF4 N/A GO:0003824 ... N/A 24806349
    1679 4pl2:B (2.2) BS01 SF4 N/A GO:0003824 ... N/A 24806349
    1680 4r0v:A (2.29) BS01 SF4 1.18.99.1 GO:0016491 ... Q9FYU1 25579778
    1681 4r0v:B (2.29) BS01 SF4 1.18.99.1 GO:0016491 ... Q9FYU1 25579778
    1682 4r33:A (1.78) BS02 SF4 ? GO:0046872 ... C6FX51 25196319
    1683 4r33:B (1.78) BS02 SF4 ? GO:0046872 ... C6FX51 25196319
    1684 4r34:A (1.8) BS03 SF4 ? GO:0046872 ... C6FX51 25196319
    1685 4r34:B (1.8) BS03 SF4 ? GO:0046872 ... C6FX51 25196319
    1686 4ras:A (2.3) BS01 SF4 ? GO:0046872 ... K2MB66 25327251
    1687 4ras:A (2.3) BS02 SF4 ? GO:0046872 ... K2MB66 25327251
    1688 4ras:B (2.3) BS01 SF4 ? GO:0046872 ... K2MB66 25327251
    1689 4ras:B (2.3) BS02 SF4 ? GO:0046872 ... K2MB66 25327251
    1690 4ras:C (2.3) BS01 SF4 ? GO:0046872 ... K2MB66 25327251
    1691 4ras:C (2.3) BS02 SF4 ? GO:0046872 ... K2MB66 25327251
    1692 4rh0:A (2.1) BS02 SF4 4.1.99.14 GO:0003824 ... A4IQU1 25285338
    1693 4rh1:A (2.6) BS01 SF4 4.1.99.14 GO:0003824 ... A4IQU1 25285338
    1694 4rku:A (3.0) BS43 SF4 1.97.1.12 GO:0000287 ... P05310 N/A
    1695 4rku:B (3.0) BS04 SF4 1.97.1.12 GO:0000287 ... P05311 N/A
    1696 4rku:C (3.0) BS01 SF4 1.97.1.12 GO:0009055 ... P10793 N/A
    1697 4rku:C (3.0) BS02 SF4 1.97.1.12 GO:0009055 ... P10793 N/A
    1698 4rqo:A (2.25) BS01 SF4 N/A GO:0003941 ... N/A 25380533
    1699 4rqo:B (2.25) BS01 SF4 N/A GO:0003941 ... N/A 25380533
    1700 4rr2:D (2.65) BS01 SF4 2.7.7.- GO:0003677 ... P49643 25550159
    1701 4rtb:A (2.79) BS02 SF4 ? GO:0003824 ... Q3ABV3 25504963
    1702 4s23:A (1.65) BS01 SF4 1.17.7.3 GO:0005506 ... Q5SLI8 25660452
    1703 4s23:B (1.65) BS01 SF4 1.17.7.3 GO:0005506 ... Q5SLI8 25660452
    1704 4s25:A (1.45) BS01 SF4 4.1.99.17 GO:0009228 ... O82392 25813242
    1705 4s26:A (1.85) BS01 SF4 4.1.99.17 GO:0009228 ... O82392 25813242
    1706 4s26:B (1.85) BS01 SF4 4.1.99.17 GO:0009228 ... O82392 25813242
    1707 4s27:A (1.27) BS01 SF4 4.1.99.17 GO:0009228 ... O82392 25813242
    1708 4s28:A (1.25) BS01 SF4 4.1.99.17 GO:0009228 ... O82392 25813242
    1709 4s2a:A (2.93) BS01 SF4 4.1.99.17 GO:0005829 ... Q9A6Q5 25813242
    1710 4s38:A (1.4) BS01 SF4 1.17.7.3 GO:0005506 ... Q5SLI8 25868383
    1711 4s39:A (1.3) BS01 SF4 1.17.7.3 GO:0005506 ... Q5SLI8 25868383
    1712 4s3a:A (1.6) BS01 SF4 1.17.7.3 GO:0005506 ... Q5SLI8 25868383
    1713 4s3b:A (1.8) BS01 SF4 1.17.7.3 GO:0005506 ... Q5SLI8 25868383
    1714 4s3c:A (1.45) BS01 SF4 1.17.7.3 GO:0005506 ... Q5SLI8 25868383
    1715 4s3e:A (1.35) BS01 SF4 1.17.7.3 GO:0005506 ... Q5SLI8 25868383
    1716 4tpu:A (2.355) BS01 SF4 1.8.7.2 GO:0005506 ... Q8TQ92 25915695
    1717 4ttt:S (1.72) BS01 SF4 1.12.99.6 GO:0005515 ... P31892 N/A
    1718 4u0o:B (1.6) BS01 SF4 2.8.1.8 GO:0003824 ... Q8DLC2 25100160
    1719 4u0o:B (1.6) BS02 SF4 2.8.1.8 GO:0003824 ... Q8DLC2 25100160
    1720 4u0p:B (1.623) BS01 SF4 2.8.1.8 GO:0003824 ... Q8DLC2 25100160
    1721 4u0p:B (1.623) BS02 SF4 2.8.1.8 GO:0003824 ... Q8DLC2 25100160
    1722 4u9h:L (0.89) BS01 SF4 1.12.2.1 GO:0008901 ... P21852 25624102
    1723 4u9h:S (0.89) BS01 SF4 1.12.2.1 GO:0008901 ... P21853 25624102
    1724 4u9h:S (0.89) BS02 SF4 1.12.2.1 GO:0008901 ... P21853 25624102
    1725 4u9i:L (1.06) BS01 SF4 1.12.2.1 GO:0008901 ... P21852 25624102
    1726 4u9i:S (1.06) BS01 SF4 1.12.2.1 GO:0008901 ... P21853 25624102
    1727 4u9i:S (1.06) BS02 SF4 1.12.2.1 GO:0008901 ... P21853 25624102
    1728 4ucq:A (2.6) BS01 SF4 1.12.2.1 GO:0008901 ... P18187 25666617
    1729 4ucq:A (2.6) BS03 SF4 1.12.2.1 GO:0008901 ... P18187 25666617
    1730 4ucq:B (2.6) BS01 SF4 1.12.2.1 GO:0008901 ... P18187 25666617
    1731 4ucq:B (2.6) BS03 SF4 1.12.2.1 GO:0008901 ... P18187 25666617
    1732 4ucq:C (2.6) BS01 SF4 1.12.2.1 GO:0008901 ... P18187 25666617
    1733 4ucq:C (2.6) BS03 SF4 1.12.2.1 GO:0008901 ... P18187 25666617
    1734 4ucq:Q (2.6) BS01 SF4 1.12.2.1 GO:0008901 ... P18188 25666617
    1735 4ucq:R (2.6) BS01 SF4 1.12.2.1 GO:0008901 ... P18188 25666617
    1736 4ucw:A (2.3) BS01 SF4 1.12.2.1 GO:0008901 ... P18187 25666617
    1737 4ucw:A (2.3) BS03 SF4 1.12.2.1 GO:0008901 ... P18187 25666617
    1738 4ucw:B (2.3) BS01 SF4 1.12.2.1 GO:0008901 ... P18187 25666617
    1739 4ucw:B (2.3) BS03 SF4 1.12.2.1 GO:0008901 ... P18187 25666617
    1740 4ucw:C (2.3) BS01 SF4 1.12.2.1 GO:0008901 ... P18187 25666617
    1741 4ucw:C (2.3) BS03 SF4 1.12.2.1 GO:0008901 ... P18187 25666617
    1742 4ucw:Q (2.3) BS01 SF4 1.12.2.1 GO:0008901 ... P18188 25666617
    1743 4ucw:R (2.3) BS01 SF4 1.12.2.1 GO:0008901 ... P18188 25666617
    1744 4ucx:A (1.95) BS01 SF4 1.12.2.1 GO:0008901 ... P18187 25666617
    1745 4ucx:A (1.95) BS03 SF4 1.12.2.1 GO:0008901 ... P18187 25666617
    1746 4ucx:B (1.95) BS01 SF4 1.12.2.1 GO:0008901 ... P18187 25666617
    1747 4ucx:B (1.95) BS03 SF4 1.12.2.1 GO:0008901 ... P18187 25666617
    1748 4ucx:C (1.95) BS01 SF4 1.12.2.1 GO:0008901 ... P18187 25666617
    1749 4ucx:C (1.95) BS03 SF4 1.12.2.1 GO:0008901 ... P18187 25666617
    1750 4ud2:A (2.3) BS01 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1751 4ud2:A (2.3) BS03 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1752 4ud2:B (2.3) BS01 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1753 4ud2:B (2.3) BS03 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1754 4ud2:C (2.3) BS01 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1755 4ud2:C (2.3) BS03 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1756 4ud2:S (2.3) BS01 SF4 1.12.2.1 GO:0008901 ... E1K247 25780984
    1757 4ud6:A (2.12) BS01 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1758 4ud6:A (2.12) BS03 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1759 4ud6:B (2.12) BS01 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1760 4ud6:B (2.12) BS03 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1761 4ud6:C (2.12) BS01 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1762 4ud6:C (2.12) BS03 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1763 4ud6:Q (2.12) BS01 SF4 1.12.2.1 GO:0008901 ... E1K247 25780984
    1764 4ud6:S (2.12) BS01 SF4 1.12.2.1 GO:0008901 ... E1K247 25780984
    1765 4udx:X (1.03) BS01 SF4 1.2.7.4 GO:0003824 ... Q9F8A8 25926100
    1766 4udy:X (1.09) BS01 SF4 1.2.7.4 GO:0003824 ... Q9F8A8 25926100
    1767 4ue2:A (2.02) BS01 SF4 1.12.2.1 GO:0008901 ... P18187 25780984
    1768 4ue2:A (2.02) BS03 SF4 1.12.2.1 GO:0008901 ... P18187 25780984
    1769 4ue2:B (2.02) BS01 SF4 1.12.2.1 GO:0008901 ... P18187 25780984
    1770 4ue2:B (2.02) BS03 SF4 1.12.2.1 GO:0008901 ... P18187 25780984
    1771 4ue2:C (2.02) BS01 SF4 1.12.2.1 GO:0008901 ... P18187 25780984
    1772 4ue2:C (2.02) BS03 SF4 1.12.2.1 GO:0008901 ... P18187 25780984
    1773 4ue2:Q (2.02) BS02 SF4 1.12.2.1 GO:0008901 ... P18188 25780984
    1774 4ue2:R (2.02) BS02 SF4 1.12.2.1 GO:0008901 ... P18188 25780984
    1775 4ue2:S (2.02) BS01 SF4 1.12.2.1 GO:0008901 ... P18188 25780984
    1776 4ue3:SSS (1.4) BS01 SF4 1.12.99.6 GO:0008901 ... P69739 26619250
    1777 4ue3:TTT (1.4) BS01 SF4 1.12.99.6 GO:0008901 ... P69739 26619250
    1778 4ue6:A (2.3) BS01 SF4 1.12.2.1 GO:0008901 ... P18187 25780984
    1779 4ue6:A (2.3) BS03 SF4 1.12.2.1 GO:0008901 ... P18187 25780984
    1780 4ue6:B (2.3) BS01 SF4 1.12.2.1 GO:0008901 ... P18187 25780984
    1781 4ue6:B (2.3) BS03 SF4 1.12.2.1 GO:0008901 ... P18187 25780984
    1782 4ue6:C (2.3) BS01 SF4 1.12.2.1 GO:0008901 ... P18187 25780984
    1783 4ue6:C (2.3) BS03 SF4 1.12.2.1 GO:0008901 ... P18187 25780984
    1784 4ueq:A (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1785 4ueq:A (1.7) BS03 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1786 4ueq:B (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1787 4ueq:B (1.7) BS03 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1788 4ueq:C (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1789 4ueq:C (1.7) BS03 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1790 4ueq:D (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1791 4ueq:D (1.7) BS03 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1792 4ueq:E (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1793 4ueq:E (1.7) BS03 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1794 4ueq:F (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1795 4ueq:F (1.7) BS03 SF4 1.12.2.1 GO:0008901 ... E1K248 25780984
    1796 4ueq:Q (1.7) BS02 SF4 1.12.2.1 GO:0008901 ... E1K247 25780984
    1797 4ueq:R (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K247 25780984
    1798 4ueq:S (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K247 25780984
    1799 4ueq:T (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K247 25780984
    1800 4ueq:U (1.7) BS01 SF4 1.12.2.1 GO:0008901 ... E1K247 25780984

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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