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BioLiP
Download all results in tab-seperated text for 941 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    801 7y7a:AV (4.3) BS03 PUB ? N/A A0A5J4YZM7 36922595
    802 7y7a:AV (4.3) BS04 PUB ? N/A A0A5J4YZM7 36922595
    803 7y7a:AV (4.3) BS05 PUB ? N/A A0A5J4YZM7 36922595
    804 7y7a:Ac (4.3) BS02 PUB ? N/A A0A5J4YX19 36922595
    805 7y7a:Ac (4.3) BS05 PUB ? N/A A0A5J4YX19 36922595
    806 7y7a:Ae (4.3) BS02 PUB ? N/A A0A5J4YX19 36922595
    807 7y7a:Ae (4.3) BS03 PUB ? N/A A0A5J4YX19 36922595
    808 7y7a:Ah (4.3) BS04 PUB ? GO:0009507 ... P11392 36922595
    809 7y7a:Aj (4.3) BS02 PUB ? N/A A0A5J4YX19 36922595
    810 7y7a:Aj (4.3) BS03 PUB ? N/A A0A5J4YX19 36922595
    811 7y7a:Al (4.3) BS03 PUB ? N/A A0A5J4YX19 36922595
    812 7y7a:Al (4.3) BS04 PUB ? N/A A0A5J4YX19 36922595
    813 7y7a:An (4.3) BS02 PUB ? N/A A0A5J4YX19 36922595
    814 7y7a:An (4.3) BS03 PUB ? N/A A0A5J4YX19 36922595
    815 7y7a:Ap (4.3) BS03 PUB ? N/A A0A5J4YZM7 36922595
    816 7y7a:Ap (4.3) BS04 PUB ? N/A A0A5J4YZM7 36922595
    817 7y7a:Ap (4.3) BS05 PUB ? N/A A0A5J4YZM7 36922595
    818 7y7a:B3 (4.3) BS02 PUB ? N/A A0A5J4YZH3 36922595
    819 7y7a:B3 (4.3) BS05 PUB ? N/A A0A5J4YZH3 36922595
    820 7y7a:BC (4.3) BS02 PUB ? N/A A0A5J4YZH3 36922595
    821 7y7a:BC (4.3) BS06 PUB ? N/A A0A5J4YZH3 36922595
    822 7y7a:BV (4.3) BS02 PUB ? N/A A0A5J4YZH3 36922595
    823 7y7a:BV (4.3) BS06 PUB ? N/A A0A5J4YZH3 36922595
    824 7y7a:Bp (4.3) BS02 PUB ? N/A A0A5J4YZH3 36922595
    825 7y7a:Bp (4.3) BS05 PUB ? N/A A0A5J4YZH3 36922595
    826 7y7a:Ca (4.3) BS03 PUB ? GO:0009507 ... P11392 36922595
    827 7y7a:Cf (4.3) BS03 PUB ? GO:0009507 ... P11392 36922595
    828 7y7a:IH (4.3) BS05 PUB ? GO:0009507 ... P11392 36922595
    829 7y7a:Ia (4.3) BS03 PUB ? GO:0009507 ... P11392 36922595
    830 7y7a:If (4.3) BS03 PUB ? GO:0009507 ... P11392 36922595
    831 7y7a:Ih (4.3) BS05 PUB ? GO:0009507 ... P11392 36922595
    832 7y7a:K5 (4.3) BS04 PUB ? GO:0009507 ... P11392 36922595
    833 7y7a:KD (4.3) BS04 PUB ? GO:0009507 ... P11392 36922595
    834 7y7a:Ka (4.3) BS05 PUB ? GO:0009507 ... P11392 36922595
    835 7y7a:Kf (4.3) BS05 PUB ? GO:0009507 ... P11392 36922595
    836 7y7a:Kg (4.3) BS04 PUB ? GO:0009507 ... P11392 36922595
    837 7y7a:Ki (4.3) BS04 PUB ? GO:0009507 ... P11392 36922595
    838 7y7a:MH (4.3) BS07 PUB ? N/A A0A5J4YNU6 36922595
    839 7y7a:MH (4.3) BS08 PUB ? N/A A0A5J4YNU6 36922595
    840 7y7a:Ma (4.3) BS02 PUB ? N/A A0A5J4YNU6 36922595
    841 7y7a:Ma (4.3) BS06 PUB ? N/A A0A5J4YNU6 36922595
    842 7y7a:Mf (4.3) BS02 PUB ? N/A A0A5J4YNU6 36922595
    843 7y7a:Mf (4.3) BS06 PUB ? N/A A0A5J4YNU6 36922595
    844 7y7a:Mh (4.3) BS07 PUB ? N/A A0A5J4YNU6 36922595
    845 7y7a:Mh (4.3) BS08 PUB ? N/A A0A5J4YNU6 36922595
    846 7y7a:N2 (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    847 7y7a:NF (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    848 7y7a:NH (4.3) BS05 PUB ? GO:0009507 ... P11392 36922595
    849 7y7a:NM (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    850 7y7a:Nc (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    851 7y7a:Nh (4.3) BS05 PUB ? GO:0009507 ... P11392 36922595
    852 7y7a:O3 (4.3) BS04 PUB ? GO:0009507 ... P11392 36922595
    853 7y7a:O6 (4.3) BS05 PUB ? GO:0009507 ... P11392 36922595
    854 7y7a:OC (4.3) BS04 PUB ? GO:0009507 ... P11392 36922595
    855 7y7a:OQ (4.3) BS05 PUB ? GO:0009507 ... P11392 36922595
    856 7y7a:OT (4.3) BS05 PUB ? GO:0009507 ... P11392 36922595
    857 7y7a:OV (4.3) BS04 PUB ? GO:0009507 ... P11392 36922595
    858 7y7a:Ob (4.3) BS05 PUB ? GO:0009507 ... P11392 36922595
    859 7y7a:Op (4.3) BS04 PUB ? GO:0009507 ... P11392 36922595
    860 7y7a:UC (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    861 7y7a:UV (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    862 7y7a:Va (4.3) BS03 PUB ? GO:0009507 ... P11392 36922595
    863 7y7a:Vf (4.3) BS03 PUB ? GO:0009507 ... P11392 36922595
    864 7y7a:Xa (4.3) BS03 PUB ? GO:0009507 ... P11392 36922595
    865 7y7a:Xf (4.3) BS03 PUB ? GO:0009507 ... P11392 36922595
    866 7y7a:Y5 (4.3) BS06 PUB ? N/A A0A5J4YX19 36922595
    867 7y7a:Y5 (4.3) BS09 PUB ? N/A A0A5J4YX19 36922595
    868 7y7a:Y6 (4.3) BS05 PUB ? GO:0009507 ... P11392 36922595
    869 7y7a:YD (4.3) BS06 PUB ? N/A A0A5J4YX19 36922595
    870 7y7a:YD (4.3) BS09 PUB ? N/A A0A5J4YX19 36922595
    871 7y7a:YQ (4.3) BS05 PUB ? GO:0009507 ... P11392 36922595
    872 7y7a:YT (4.3) BS05 PUB ? GO:0009507 ... P11392 36922595
    873 7y7a:Yb (4.3) BS05 PUB ? GO:0009507 ... P11392 36922595
    874 7y7a:Yg (4.3) BS06 PUB ? N/A A0A5J4YX19 36922595
    875 7y7a:Yg (4.3) BS09 PUB ? N/A A0A5J4YX19 36922595
    876 7y7a:Yi (4.3) BS06 PUB ? N/A A0A5J4YX19 36922595
    877 7y7a:Yi (4.3) BS09 PUB ? N/A A0A5J4YX19 36922595
    878 7y7a:ZH (4.3) BS07 PUB ? N/A A0A5J4YNU6 36922595
    879 7y7a:ZH (4.3) BS08 PUB ? N/A A0A5J4YNU6 36922595
    880 7y7a:Za (4.3) BS07 PUB ? N/A A0A5J4YNU6 36922595
    881 7y7a:Za (4.3) BS08 PUB ? N/A A0A5J4YNU6 36922595
    882 7y7a:Zf (4.3) BS06 PUB ? N/A A0A5J4YNU6 36922595
    883 7y7a:Zf (4.3) BS07 PUB ? N/A A0A5J4YNU6 36922595
    884 7y7a:Zh (4.3) BS07 PUB ? N/A A0A5J4YNU6 36922595
    885 7y7a:Zh (4.3) BS08 PUB ? N/A A0A5J4YNU6 36922595
    886 7y7a:bI (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    887 7y7a:bP (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    888 7y7a:bS (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    889 7y7a:bl (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    890 7y7a:f3 (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    891 7y7a:fp (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    892 7y7a:jI (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    893 7y7a:jP (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    894 7y7a:jS (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    895 7y7a:jl (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    896 7y7a:l1 (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    897 7y7a:l3 (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    898 7y7a:l8 (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    899 7y7a:lK (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    900 7y7a:lR (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    901 7y7a:lp (4.3) BS01 PUB ? GO:0009507 ... P11392 36922595
    902 7y7a:u6 (4.3) BS04 PUB ? GO:0009507 ... P11392 36922595
    903 7y7a:uQ (4.3) BS04 PUB ? GO:0009507 ... P11392 36922595
    904 7y7a:uT (4.3) BS04 PUB ? GO:0009507 ... P11392 36922595
    905 7y7a:ub (4.3) BS04 PUB ? GO:0009507 ... P11392 36922595
    906 7y7a:w6 (4.3) BS10 PUB ? N/A A0A5J4YZM7 36922595
    907 7y7a:w6 (4.3) BS11 PUB ? N/A A0A5J4YZM7 36922595
    908 7y7a:wQ (4.3) BS10 PUB ? N/A A0A5J4YZM7 36922595
    909 7y7a:wQ (4.3) BS11 PUB ? N/A A0A5J4YZM7 36922595
    910 7y7a:wT (4.3) BS10 PUB ? N/A A0A5J4YZM7 36922595
    911 7y7a:wT (4.3) BS11 PUB ? N/A A0A5J4YZM7 36922595
    912 7y7a:wb (4.3) BS10 PUB ? N/A A0A5J4YZM7 36922595
    913 7y7a:wb (4.3) BS11 PUB ? N/A A0A5J4YZM7 36922595
    914 7y7a:x6 (4.3) BS06 PUB ? N/A A0A5J4YZM7 36922595
    915 7y7a:x6 (4.3) BS10 PUB ? N/A A0A5J4YZM7 36922595
    916 7y7a:x6 (4.3) BS11 PUB ? N/A A0A5J4YZM7 36922595
    917 7y7a:xQ (4.3) BS06 PUB ? N/A A0A5J4YZM7 36922595
    918 7y7a:xQ (4.3) BS10 PUB ? N/A A0A5J4YZM7 36922595
    919 7y7a:xQ (4.3) BS11 PUB ? N/A A0A5J4YZM7 36922595
    920 7y7a:xT (4.3) BS06 PUB ? N/A A0A5J4YZM7 36922595
    921 7y7a:xT (4.3) BS10 PUB ? N/A A0A5J4YZM7 36922595
    922 7y7a:xT (4.3) BS11 PUB ? N/A A0A5J4YZM7 36922595
    923 7y7a:xb (4.3) BS06 PUB ? N/A A0A5J4YZM7 36922595
    924 7y7a:xb (4.3) BS10 PUB ? N/A A0A5J4YZM7 36922595
    925 7y7a:xb (4.3) BS11 PUB ? N/A A0A5J4YZM7 36922595
    926 7y7a:y6 (4.3) BS08 PUB ? N/A A0A5J4YZH3 36922595
    927 7y7a:y6 (4.3) BS09 PUB ? N/A A0A5J4YZH3 36922595
    928 7y7a:yQ (4.3) BS08 PUB ? N/A A0A5J4YZH3 36922595
    929 7y7a:yQ (4.3) BS09 PUB ? N/A A0A5J4YZH3 36922595
    930 7y7a:yT (4.3) BS08 PUB ? N/A A0A5J4YZH3 36922595
    931 7y7a:yT (4.3) BS09 PUB ? N/A A0A5J4YZH3 36922595
    932 7y7a:yb (4.3) BS07 PUB ? N/A A0A5J4YZH3 36922595
    933 7y7a:yb (4.3) BS08 PUB ? N/A A0A5J4YZH3 36922595
    934 8u0f:C (2.07) BS01 PUB N/A N/A Q1AH60 N/A
    935 8u0f:L (2.07) BS01 PUB N/A N/A Q1AH60 N/A
    936 8u0y:A (3.0) BS01 PUB N/A N/A N/A N/A
    937 8u0y:A (3.0) BS02 PUB N/A N/A N/A N/A
    938 8u0y:A (3.0) BS03 PUB N/A N/A N/A N/A
    939 8u0y:B (3.0) BS01 PUB N/A N/A N/A N/A
    940 8u0y:B (3.0) BS02 PUB N/A N/A N/A N/A
    941 8u0y:B (3.0) BS03 PUB N/A N/A N/A N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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