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BioLiP
Download all results in tab-seperated text for 30 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 1tuu:B (2.5) BS02 PIS 2.7.2.1 GO:0000287 ... P38502 15647264
    2 4e0u:A (2.6) BS02 PIS 2.5.1.-
    3.4.11.17    		 GO:0004177 ... D1D8L6 22683356
    3 4e0u:B (2.6) BS02 PIS 2.5.1.-
    3.4.11.17    		 GO:0004177 ... D1D8L6 22683356
    4 4ee7:A (1.67) BS01 PIS ? GO:0004659 ... E5KWG9 23119011
    5 4ld7:A (2.83) BS01 PIS 2.5.1.- GO:0009820 ... A1DN10 24239009
    6 4ld7:B (2.83) BS01 PIS 2.5.1.- GO:0009820 ... A1DN10 24239009
    7 4ld7:C (2.83) BS01 PIS 2.5.1.- GO:0009820 ... A1DN10 24239009
    8 4ld7:D (2.83) BS01 PIS 2.5.1.- GO:0009820 ... A1DN10 24239009
    9 4ld7:E (2.83) BS01 PIS 2.5.1.- GO:0009820 ... A1DN10 24239009
    10 4ld7:F (2.83) BS01 PIS 2.5.1.- GO:0009820 ... A1DN10 24239009
    11 4ld7:G (2.83) BS01 PIS 2.5.1.- GO:0009820 ... A1DN10 24239009
    12 4ld7:H (2.83) BS01 PIS 2.5.1.- GO:0009820 ... A1DN10 24239009
    13 4ld7:I (2.83) BS01 PIS 2.5.1.- GO:0009820 ... A1DN10 24239009
    14 4ld7:J (2.83) BS01 PIS 2.5.1.- GO:0009820 ... A1DN10 24239009
    15 4ld7:K (2.83) BS01 PIS 2.5.1.- GO:0009820 ... A1DN10 24239009
    16 4ld7:L (2.83) BS01 PIS 2.5.1.- GO:0009820 ... A1DN10 24239009
    17 4ld7:M (2.83) BS01 PIS 2.5.1.- GO:0009820 ... A1DN10 24239009
    18 4ld7:N (2.83) BS01 PIS 2.5.1.- GO:0009820 ... A1DN10 24239009
    19 4ld7:O (2.83) BS01 PIS 2.5.1.- GO:0009820 ... A1DN10 24239009
    20 4ld7:P (2.83) BS01 PIS 2.5.1.- GO:0009820 ... A1DN10 24239009
    21 5hc8:A (1.87) BS01 PIS 2.5.1.- GO:0002094 ... A0A140UHQ1 26922900
    22 6pmt:A (2.3) BS02 PIS ? GO:0005524 ... P38646 N/A
    23 7oc4:A (2.03) BS02 PIS 4.2.3.104 GO:0016114 ... A0A2U8U2L5 34180566
    24 7oc4:B (2.03) BS02 PIS 4.2.3.104 GO:0016114 ... A0A2U8U2L5 34180566
    25 8je4:A (2.19) BS01 PIS ? GO:0016740 ... A0A372DCN7 37877712
    26 8je4:B (2.19) BS01 PIS ? GO:0016740 ... A0A372DCN7 37877712
    27 8ye0:A (1.94) BS01 PIS N/A GO:0016740 ... A0A551Z2V8 38837490
    28 8ye0:B (1.94) BS01 PIS N/A GO:0016740 ... A0A551Z2V8 38837490
    29 8ye0:C (1.94) BS01 PIS N/A GO:0016740 ... A0A551Z2V8 38837490
    30 8ye0:D (1.94) BS01 PIS N/A GO:0016740 ... A0A551Z2V8 38837490
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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