Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1601 5y6p:ce (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1602 5y6p:cf (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1603 5y6p:cf (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1604 5y6p:cf (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1605 5y6p:cg (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1606 5y6p:ch (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1607 5y6p:ch (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1608 5y6p:ci (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1609 5y6p:cj (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1610 5y6p:cj (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1611 5y6p:ck (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1612 5y6p:cl (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1613 5y6p:cl (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1614 5y6p:cm (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1615 5y6p:cm (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1616 5y6p:cm (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1617 5y6p:cm (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1618 5y6p:cn (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1619 5y6p:cn (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1620 5y6p:cn (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1621 5y6p:co (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1622 5y6p:co (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1623 5y6p:co (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1624 5y6p:cp (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1625 5y6p:cp (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1626 5y6p:cq (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1627 5y6p:cq (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1628 5y6p:cr (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1629 5y6p:cr (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1630 5y6p:cr (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1631 5y6p:cs (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1632 5y6p:cs (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1633 5y6p:cs (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1634 5y6p:ct (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1635 5y6p:ct (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1636 5y6p:ct (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1637 5y6p:ct (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1638 5y6p:cu (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1639 5y6p:cu (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1640 5y6p:cv (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1641 5y6p:cv (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1642 5y6p:cv (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1643 5y6p:cw (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1644 5y6p:cw (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1645 5y6p:cx (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1646 5y6p:cx (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1647 5y6p:cy (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1648 5y6p:cy (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1649 5y6p:cy (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1650 5y6p:cy (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1651 5y6p:cz (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1652 5y6p:cz (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1653 5y6p:d3 (3.5) BS01 PEB N/A N/A N/A 29045394
    1654 5y6p:d3 (3.5) BS02 PEB N/A N/A N/A 29045394
    1655 5y6p:d3 (3.5) BS03 PEB N/A N/A N/A 29045394
    1656 5y6p:d3 (3.5) BS04 PEB N/A N/A N/A 29045394
    1657 5y6p:d3 (3.5) BS05 PEB N/A N/A N/A 29045394
    1658 5y6p:d3 (3.5) BS06 PEB N/A N/A N/A 29045394
    1659 5y6p:d3 (3.5) BS07 PEB N/A N/A N/A 29045394
    1660 5y6p:d3 (3.5) BS08 PEB N/A N/A N/A 29045394
    1661 5y6p:d4 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1662 5y6p:d5 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1663 5y6p:d5 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1664 5y6p:d6 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1665 5y6p:d6 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1666 5y6p:d7 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1667 5y6p:d7 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1668 5y6p:d7 (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1669 5y6p:d8 (3.5) BS01 PEB N/A N/A N/A 29045394
    1670 5y6p:d8 (3.5) BS02 PEB N/A N/A N/A 29045394
    1671 5y6p:d8 (3.5) BS03 PEB N/A N/A N/A 29045394
    1672 5y6p:d8 (3.5) BS04 PEB N/A N/A N/A 29045394
    1673 5y6p:d8 (3.5) BS06 PEB N/A N/A N/A 29045394
    1674 5y6p:d8 (3.5) BS07 PEB N/A N/A N/A 29045394
    1675 5y6p:d8 (3.5) BS08 PEB N/A N/A N/A 29045394
    1676 5y6p:d9 (3.5) BS01 PEB N/A N/A N/A 29045394
    1677 5y6p:d9 (3.5) BS02 PEB N/A N/A N/A 29045394
    1678 5y6p:d9 (3.5) BS03 PEB N/A N/A N/A 29045394
    1679 5y6p:d9 (3.5) BS05 PEB N/A N/A N/A 29045394
    1680 5y6p:d9 (3.5) BS06 PEB N/A N/A N/A 29045394
    1681 5y6p:d9 (3.5) BS07 PEB N/A N/A N/A 29045394
    1682 5y6p:d9 (3.5) BS08 PEB N/A N/A N/A 29045394
    1683 5y6p:d9 (3.5) BS09 PEB N/A N/A N/A 29045394
    1684 5y6p:dA (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1685 5y6p:dA (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1686 5y6p:dA (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1687 5y6p:dB (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1688 5y6p:dB (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1689 5y6p:dB (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1690 5y6p:dC (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1691 5y6p:dC (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1692 5y6p:dD (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1693 5y6p:dD (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1694 5y6p:dD (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1695 5y6p:dE (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1696 5y6p:dE (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1697 5y6p:dF (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1698 5y6p:dF (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1699 5y6p:dF (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1700 5y6p:dG (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1701 5y6p:dG (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1702 5y6p:dG (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1703 5y6p:dH (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1704 5y6p:dH (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1705 5y6p:dI (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1706 5y6p:dI (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1707 5y6p:dI (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1708 5y6p:dI (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1709 5y6p:dJ (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1710 5y6p:dJ (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1711 5y6p:dJ (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1712 5y6p:dK (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1713 5y6p:dK (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1714 5y6p:dL (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1715 5y6p:dL (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1716 5y6p:dL (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1717 5y6p:dM (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1718 5y6p:dM (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1719 5y6p:dN (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1720 5y6p:dN (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1721 5y6p:dO (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1722 5y6p:dO (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1723 5y6p:dO (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1724 5y6p:dO (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1725 5y6p:dP (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1726 5y6p:dP (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1727 5y6p:dP (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1728 5y6p:dQ (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1729 5y6p:dQ (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1730 5y6p:dR (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1731 5y6p:dR (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1732 5y6p:dR (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1733 5y6p:dS (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1734 5y6p:dS (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1735 5y6p:dS (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1736 5y6p:dT (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1737 5y6p:dT (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1738 5y6p:dT (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1739 5y6p:dU (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1740 5y6p:dU (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1741 5y6p:dV (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1742 5y6p:dV (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1743 5y6p:dW (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1744 5y6p:dW (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1745 5y6p:dW (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1746 5y6p:dX (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1747 5y6p:dX (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1748 5y6p:dX (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1749 5y6p:dY (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1750 5y6p:dY (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1751 5y6p:dZ (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1752 5y6p:dZ (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1753 5y6p:dZ (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1754 5y6p:dZ (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1755 5y6p:da (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1756 5y6p:da (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1757 5y6p:da (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1758 5y6p:db (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1759 5y6p:db (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1760 5y6p:dc (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1761 5y6p:dc (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1762 5y6p:dd (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1763 5y6p:dd (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1764 5y6p:de (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1765 5y6p:de (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1766 5y6p:df (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1767 5y6p:df (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1768 5y6p:df (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1769 5y6p:dg (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1770 5y6p:dg (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1771 5y6p:dh (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1772 5y6p:dh (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1773 5y6p:di (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1774 5y6p:di (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1775 5y6p:dj (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1776 5y6p:dj (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1777 5y6p:dk (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1778 5y6p:dk (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1779 5y6p:dl (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1780 5y6p:dl (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1781 5y6p:dm (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1782 5y6p:dm (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1783 5y6p:dn (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1784 5y6p:dn (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1785 5y6p:do (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1786 5y6p:do (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1787 5y6p:do (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1788 5y6p:dp (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1789 5y6p:dp (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1790 5y6p:dp (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1791 5y6p:dq (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1792 5y6p:dq (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1793 5y6p:dr (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1794 5y6p:dr (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1795 5y6p:dr (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1796 5y6p:ds (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1797 5y6p:ds (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1798 5y6p:ds (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1799 5y6p:dt (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1800 5y6p:dt (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218