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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    16201 7y7a:q6 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16202 7y7a:q6 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16203 7y7a:q6 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    16204 7y7a:q6 (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    16205 7y7a:qG (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16206 7y7a:qG (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16207 7y7a:qG (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16208 7y7a:qG (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    16209 7y7a:qN (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16210 7y7a:qN (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16211 7y7a:qN (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16212 7y7a:qQ (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16213 7y7a:qQ (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16214 7y7a:qQ (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    16215 7y7a:qQ (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    16216 7y7a:qT (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16217 7y7a:qT (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16218 7y7a:qT (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    16219 7y7a:qT (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    16220 7y7a:qX (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16221 7y7a:qX (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16222 7y7a:qX (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16223 7y7a:qX (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    16224 7y7a:qY (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16225 7y7a:qY (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16226 7y7a:qY (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16227 7y7a:qb (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16228 7y7a:qb (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16229 7y7a:qb (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    16230 7y7a:qb (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    16231 7y7a:r6 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16232 7y7a:r6 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16233 7y7a:r6 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16234 7y7a:r6 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    16235 7y7a:rG (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16236 7y7a:rG (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16237 7y7a:rG (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    16238 7y7a:rN (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16239 7y7a:rN (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16240 7y7a:rQ (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16241 7y7a:rQ (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16242 7y7a:rQ (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16243 7y7a:rQ (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    16244 7y7a:rT (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16245 7y7a:rT (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16246 7y7a:rT (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16247 7y7a:rT (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    16248 7y7a:rX (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16249 7y7a:rX (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16250 7y7a:rX (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    16251 7y7a:rY (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16252 7y7a:rY (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16253 7y7a:rb (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16254 7y7a:rb (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16255 7y7a:rb (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16256 7y7a:rb (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    16257 7y7a:s6 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16258 7y7a:s6 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16259 7y7a:s6 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    16260 7y7a:sG (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16261 7y7a:sG (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16262 7y7a:sG (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16263 7y7a:sG (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    16264 7y7a:sN (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16265 7y7a:sN (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16266 7y7a:sN (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16267 7y7a:sQ (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16268 7y7a:sQ (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16269 7y7a:sQ (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    16270 7y7a:sT (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16271 7y7a:sT (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16272 7y7a:sT (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    16273 7y7a:sX (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16274 7y7a:sX (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16275 7y7a:sX (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16276 7y7a:sX (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    16277 7y7a:sY (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16278 7y7a:sY (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16279 7y7a:sY (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16280 7y7a:sb (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16281 7y7a:sb (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16282 7y7a:sb (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    16283 7y7a:t6 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16284 7y7a:t6 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16285 7y7a:t6 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16286 7y7a:t6 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    16287 7y7a:tG (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16288 7y7a:tG (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16289 7y7a:tG (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    16290 7y7a:tN (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16291 7y7a:tN (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16292 7y7a:tQ (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16293 7y7a:tQ (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16294 7y7a:tQ (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16295 7y7a:tQ (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    16296 7y7a:tT (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16297 7y7a:tT (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16298 7y7a:tT (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16299 7y7a:tT (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    16300 7y7a:tX (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16301 7y7a:tX (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16302 7y7a:tX (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    16303 7y7a:tY (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16304 7y7a:tY (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16305 7y7a:tb (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16306 7y7a:tb (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16307 7y7a:tb (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16308 7y7a:tb (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    16309 7y7a:u6 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16310 7y7a:u6 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16311 7y7a:u6 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    16312 7y7a:uG (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16313 7y7a:uG (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16314 7y7a:uG (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16315 7y7a:uG (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    16316 7y7a:uN (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16317 7y7a:uN (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16318 7y7a:uN (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16319 7y7a:uQ (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16320 7y7a:uQ (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16321 7y7a:uQ (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    16322 7y7a:uT (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16323 7y7a:uT (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16324 7y7a:uT (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    16325 7y7a:uX (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16326 7y7a:uX (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16327 7y7a:uX (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16328 7y7a:uX (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    16329 7y7a:uY (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16330 7y7a:uY (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16331 7y7a:uY (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16332 7y7a:ub (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16333 7y7a:ub (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16334 7y7a:ub (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    16335 7y7a:v6 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16336 7y7a:v6 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16337 7y7a:v6 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16338 7y7a:v6 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    16339 7y7a:vG (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16340 7y7a:vG (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16341 7y7a:vG (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    16342 7y7a:vG (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    16343 7y7a:vN (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16344 7y7a:vN (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16345 7y7a:vQ (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16346 7y7a:vQ (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16347 7y7a:vQ (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16348 7y7a:vQ (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    16349 7y7a:vT (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16350 7y7a:vT (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16351 7y7a:vT (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16352 7y7a:vT (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    16353 7y7a:vX (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16354 7y7a:vX (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16355 7y7a:vX (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    16356 7y7a:vX (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    16357 7y7a:vY (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    16358 7y7a:vY (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    16359 7y7a:vb (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16360 7y7a:vb (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16361 7y7a:vb (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16362 7y7a:vb (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    16363 7y7a:w6 (4.3) BS01 PEB ? N/A A0A5J4YZM7 36922595
    16364 7y7a:w6 (4.3) BS02 PEB ? N/A A0A5J4YZM7 36922595
    16365 7y7a:w6 (4.3) BS03 PEB ? N/A A0A5J4YZM7 36922595
    16366 7y7a:w6 (4.3) BS04 PEB ? N/A A0A5J4YZM7 36922595
    16367 7y7a:w6 (4.3) BS05 PEB ? N/A A0A5J4YZM7 36922595
    16368 7y7a:w6 (4.3) BS06 PEB ? N/A A0A5J4YZM7 36922595
    16369 7y7a:w6 (4.3) BS07 PEB ? N/A A0A5J4YZM7 36922595
    16370 7y7a:w6 (4.3) BS08 PEB ? N/A A0A5J4YZM7 36922595
    16371 7y7a:w6 (4.3) BS09 PEB ? N/A A0A5J4YZM7 36922595
    16372 7y7a:wG (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16373 7y7a:wG (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16374 7y7a:wG (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16375 7y7a:wG (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    16376 7y7a:wG (4.3) BS05 PEB ? GO:0009507 ... P11393 36922595
    16377 7y7a:wN (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16378 7y7a:wN (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    16379 7y7a:wN (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    16380 7y7a:wN (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    16381 7y7a:wQ (4.3) BS01 PEB ? N/A A0A5J4YZM7 36922595
    16382 7y7a:wQ (4.3) BS02 PEB ? N/A A0A5J4YZM7 36922595
    16383 7y7a:wQ (4.3) BS03 PEB ? N/A A0A5J4YZM7 36922595
    16384 7y7a:wQ (4.3) BS04 PEB ? N/A A0A5J4YZM7 36922595
    16385 7y7a:wQ (4.3) BS05 PEB ? N/A A0A5J4YZM7 36922595
    16386 7y7a:wQ (4.3) BS06 PEB ? N/A A0A5J4YZM7 36922595
    16387 7y7a:wQ (4.3) BS07 PEB ? N/A A0A5J4YZM7 36922595
    16388 7y7a:wQ (4.3) BS08 PEB ? N/A A0A5J4YZM7 36922595
    16389 7y7a:wQ (4.3) BS09 PEB ? N/A A0A5J4YZM7 36922595
    16390 7y7a:wT (4.3) BS01 PEB ? N/A A0A5J4YZM7 36922595
    16391 7y7a:wT (4.3) BS02 PEB ? N/A A0A5J4YZM7 36922595
    16392 7y7a:wT (4.3) BS03 PEB ? N/A A0A5J4YZM7 36922595
    16393 7y7a:wT (4.3) BS04 PEB ? N/A A0A5J4YZM7 36922595
    16394 7y7a:wT (4.3) BS05 PEB ? N/A A0A5J4YZM7 36922595
    16395 7y7a:wT (4.3) BS06 PEB ? N/A A0A5J4YZM7 36922595
    16396 7y7a:wT (4.3) BS07 PEB ? N/A A0A5J4YZM7 36922595
    16397 7y7a:wT (4.3) BS08 PEB ? N/A A0A5J4YZM7 36922595
    16398 7y7a:wT (4.3) BS09 PEB ? N/A A0A5J4YZM7 36922595
    16399 7y7a:wX (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    16400 7y7a:wX (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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