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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    15401 7y7a:dC (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    15402 7y7a:dF (4.3) BS01 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15403 7y7a:dF (4.3) BS02 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15404 7y7a:dF (4.3) BS03 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15405 7y7a:dF (4.3) BS04 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15406 7y7a:dF (4.3) BS05 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15407 7y7a:dF (4.3) BS06 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15408 7y7a:dI (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15409 7y7a:dI (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15410 7y7a:dI (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15411 7y7a:dK (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15412 7y7a:dK (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15413 7y7a:dK (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15414 7y7a:dM (4.3) BS01 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15415 7y7a:dM (4.3) BS02 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15416 7y7a:dM (4.3) BS03 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15417 7y7a:dM (4.3) BS04 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15418 7y7a:dM (4.3) BS05 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15419 7y7a:dM (4.3) BS06 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15420 7y7a:dP (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15421 7y7a:dP (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15422 7y7a:dP (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15423 7y7a:dQ (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15424 7y7a:dQ (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15425 7y7a:dQ (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15426 7y7a:dQ (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15427 7y7a:dR (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15428 7y7a:dR (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15429 7y7a:dR (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15430 7y7a:dS (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15431 7y7a:dS (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15432 7y7a:dS (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15433 7y7a:dT (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15434 7y7a:dT (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15435 7y7a:dT (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15436 7y7a:dT (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15437 7y7a:dV (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15438 7y7a:dV (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15439 7y7a:dV (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15440 7y7a:dV (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    15441 7y7a:dW (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15442 7y7a:dW (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15443 7y7a:dW (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15444 7y7a:db (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15445 7y7a:db (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15446 7y7a:db (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15447 7y7a:db (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15448 7y7a:dc (4.3) BS01 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15449 7y7a:dc (4.3) BS02 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15450 7y7a:dc (4.3) BS03 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15451 7y7a:dc (4.3) BS04 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15452 7y7a:dc (4.3) BS05 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15453 7y7a:dc (4.3) BS06 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15454 7y7a:de (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15455 7y7a:de (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15456 7y7a:de (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15457 7y7a:de (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    15458 7y7a:dj (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15459 7y7a:dj (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15460 7y7a:dj (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15461 7y7a:dj (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    15462 7y7a:dl (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15463 7y7a:dl (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15464 7y7a:dl (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15465 7y7a:dn (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15466 7y7a:dn (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15467 7y7a:dn (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15468 7y7a:dn (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    15469 7y7a:dp (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15470 7y7a:dp (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15471 7y7a:dp (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15472 7y7a:dp (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    15473 7y7a:e1 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15474 7y7a:e1 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15475 7y7a:e1 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15476 7y7a:e1 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15477 7y7a:e3 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15478 7y7a:e3 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15479 7y7a:e3 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15480 7y7a:e3 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15481 7y7a:e4 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15482 7y7a:e4 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15483 7y7a:e4 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15484 7y7a:e4 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15485 7y7a:e5 (4.3) BS01 PEB ? GO:0015979 ... A0A5J4Z7F4 36922595
    15486 7y7a:e5 (4.3) BS02 PEB ? GO:0015979 ... A0A5J4Z7F4 36922595
    15487 7y7a:e5 (4.3) BS03 PEB ? GO:0015979 ... A0A5J4Z7F4 36922595
    15488 7y7a:e5 (4.3) BS04 PEB ? GO:0015979 ... A0A5J4Z7F4 36922595
    15489 7y7a:e5 (4.3) BS05 PEB ? GO:0015979 ... A0A5J4Z7F4 36922595
    15490 7y7a:e6 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15491 7y7a:e6 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15492 7y7a:e6 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15493 7y7a:e8 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15494 7y7a:e8 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15495 7y7a:e8 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15496 7y7a:e8 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15497 7y7a:eA (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15498 7y7a:eA (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15499 7y7a:eA (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15500 7y7a:eA (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15501 7y7a:eC (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15502 7y7a:eC (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15503 7y7a:eC (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15504 7y7a:eC (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15505 7y7a:eD (4.3) BS01 PEB ? GO:0015979 ... A0A5J4Z7F4 36922595
    15506 7y7a:eD (4.3) BS02 PEB ? GO:0015979 ... A0A5J4Z7F4 36922595
    15507 7y7a:eD (4.3) BS03 PEB ? GO:0015979 ... A0A5J4Z7F4 36922595
    15508 7y7a:eD (4.3) BS04 PEB ? GO:0015979 ... A0A5J4Z7F4 36922595
    15509 7y7a:eD (4.3) BS05 PEB ? GO:0015979 ... A0A5J4Z7F4 36922595
    15510 7y7a:eI (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15511 7y7a:eI (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15512 7y7a:eI (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15513 7y7a:eI (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15514 7y7a:eK (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15515 7y7a:eK (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15516 7y7a:eK (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15517 7y7a:eK (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15518 7y7a:eP (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15519 7y7a:eP (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15520 7y7a:eP (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15521 7y7a:eP (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15522 7y7a:eQ (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15523 7y7a:eQ (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15524 7y7a:eQ (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15525 7y7a:eR (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15526 7y7a:eR (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15527 7y7a:eR (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15528 7y7a:eR (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15529 7y7a:eS (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15530 7y7a:eS (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15531 7y7a:eS (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15532 7y7a:eS (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15533 7y7a:eT (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15534 7y7a:eT (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15535 7y7a:eT (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15536 7y7a:eV (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15537 7y7a:eV (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15538 7y7a:eV (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15539 7y7a:eV (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15540 7y7a:eW (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15541 7y7a:eW (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15542 7y7a:eW (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15543 7y7a:eW (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15544 7y7a:eb (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15545 7y7a:eb (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15546 7y7a:eb (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15547 7y7a:ee (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15548 7y7a:ee (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15549 7y7a:ee (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15550 7y7a:ee (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15551 7y7a:eg (4.3) BS01 PEB ? GO:0015979 ... A0A5J4Z7F4 36922595
    15552 7y7a:eg (4.3) BS02 PEB ? GO:0015979 ... A0A5J4Z7F4 36922595
    15553 7y7a:eg (4.3) BS03 PEB ? GO:0015979 ... A0A5J4Z7F4 36922595
    15554 7y7a:eg (4.3) BS04 PEB ? GO:0015979 ... A0A5J4Z7F4 36922595
    15555 7y7a:eg (4.3) BS05 PEB ? GO:0015979 ... A0A5J4Z7F4 36922595
    15556 7y7a:ei (4.3) BS01 PEB ? GO:0015979 ... A0A5J4Z7F4 36922595
    15557 7y7a:ei (4.3) BS02 PEB ? GO:0015979 ... A0A5J4Z7F4 36922595
    15558 7y7a:ei (4.3) BS03 PEB ? GO:0015979 ... A0A5J4Z7F4 36922595
    15559 7y7a:ei (4.3) BS04 PEB ? GO:0015979 ... A0A5J4Z7F4 36922595
    15560 7y7a:ei (4.3) BS05 PEB ? GO:0015979 ... A0A5J4Z7F4 36922595
    15561 7y7a:ej (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15562 7y7a:ej (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15563 7y7a:ej (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15564 7y7a:ej (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15565 7y7a:el (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15566 7y7a:el (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15567 7y7a:el (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15568 7y7a:el (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15569 7y7a:en (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15570 7y7a:en (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15571 7y7a:en (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15572 7y7a:en (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15573 7y7a:ep (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15574 7y7a:ep (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15575 7y7a:ep (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15576 7y7a:ep (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15577 7y7a:f1 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15578 7y7a:f1 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15579 7y7a:f1 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15580 7y7a:f3 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15581 7y7a:f3 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15582 7y7a:f3 (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    15583 7y7a:f3 (4.3) BS05 PEB ? GO:0009507 ... P11392 36922595
    15584 7y7a:f4 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15585 7y7a:f4 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15586 7y7a:f4 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15587 7y7a:f6 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15588 7y7a:f6 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15589 7y7a:f6 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15590 7y7a:f8 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15591 7y7a:f8 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15592 7y7a:f8 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15593 7y7a:fA (4.3) BS01 PEB ? N/A A0A5J4Z027 36922595
    15594 7y7a:fA (4.3) BS02 PEB ? N/A A0A5J4Z027 36922595
    15595 7y7a:fC (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15596 7y7a:fC (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15597 7y7a:fC (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15598 7y7a:fC (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    15599 7y7a:fI (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15600 7y7a:fI (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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