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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    15201 7y7a:b3 (4.3) BS04 PEB ? GO:0009507 ... A0A5J4YX63 36922595
    15202 7y7a:b4 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15203 7y7a:b4 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15204 7y7a:b4 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15205 7y7a:b6 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15206 7y7a:b6 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15207 7y7a:b6 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15208 7y7a:b6 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15209 7y7a:b8 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15210 7y7a:b8 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15211 7y7a:b8 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15212 7y7a:bA (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15213 7y7a:bA (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15214 7y7a:bA (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15215 7y7a:bB (4.3) BS01 PEB ? GO:0005615 ... A0A5J4ZA95 36922595
    15216 7y7a:bC (4.3) BS01 PEB ? GO:0009507 ... A0A5J4YX63 36922595
    15217 7y7a:bC (4.3) BS02 PEB ? GO:0009507 ... A0A5J4YX63 36922595
    15218 7y7a:bC (4.3) BS03 PEB ? GO:0009507 ... A0A5J4YX63 36922595
    15219 7y7a:bC (4.3) BS04 PEB ? GO:0009507 ... A0A5J4YX63 36922595
    15220 7y7a:bI (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15221 7y7a:bI (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15222 7y7a:bI (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    15223 7y7a:bK (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15224 7y7a:bK (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15225 7y7a:bK (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15226 7y7a:bL (4.3) BS01 PEB ? GO:0009507 ... A0A5J4YMI8 36922595
    15227 7y7a:bL (4.3) BS02 PEB ? GO:0009507 ... A0A5J4YMI8 36922595
    15228 7y7a:bL (4.3) BS03 PEB ? GO:0009507 ... A0A5J4YMI8 36922595
    15229 7y7a:bL (4.3) BS04 PEB ? GO:0009507 ... A0A5J4YMI8 36922595
    15230 7y7a:bL (4.3) BS05 PEB ? GO:0009507 ... A0A5J4YMI8 36922595
    15231 7y7a:bL (4.3) BS06 PEB ? GO:0009507 ... A0A5J4YMI8 36922595
    15232 7y7a:bL (4.3) BS07 PEB ? GO:0009507 ... A0A5J4YMI8 36922595
    15233 7y7a:bL (4.3) BS08 PEB ? GO:0009507 ... A0A5J4YMI8 36922595
    15234 7y7a:bL (4.3) BS09 PEB ? GO:0009507 ... A0A5J4YMI8 36922595
    15235 7y7a:bL (4.3) BS10 PEB ? GO:0009507 ... A0A5J4YMI8 36922595
    15236 7y7a:bP (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15237 7y7a:bP (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15238 7y7a:bP (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    15239 7y7a:bQ (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15240 7y7a:bQ (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15241 7y7a:bQ (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15242 7y7a:bQ (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15243 7y7a:bR (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15244 7y7a:bR (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15245 7y7a:bR (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15246 7y7a:bS (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15247 7y7a:bS (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15248 7y7a:bS (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    15249 7y7a:bT (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15250 7y7a:bT (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15251 7y7a:bT (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15252 7y7a:bT (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15253 7y7a:bU (4.3) BS01 PEB ? GO:0009507 ... A0A5J4YMI8 36922595
    15254 7y7a:bU (4.3) BS02 PEB ? GO:0009507 ... A0A5J4YMI8 36922595
    15255 7y7a:bU (4.3) BS03 PEB ? GO:0009507 ... A0A5J4YMI8 36922595
    15256 7y7a:bU (4.3) BS04 PEB ? GO:0009507 ... A0A5J4YMI8 36922595
    15257 7y7a:bU (4.3) BS05 PEB ? GO:0009507 ... A0A5J4YMI8 36922595
    15258 7y7a:bU (4.3) BS06 PEB ? GO:0009507 ... A0A5J4YMI8 36922595
    15259 7y7a:bU (4.3) BS07 PEB ? GO:0009507 ... A0A5J4YMI8 36922595
    15260 7y7a:bU (4.3) BS08 PEB ? GO:0009507 ... A0A5J4YMI8 36922595
    15261 7y7a:bU (4.3) BS09 PEB ? GO:0009507 ... A0A5J4YMI8 36922595
    15262 7y7a:bU (4.3) BS10 PEB ? GO:0009507 ... A0A5J4YMI8 36922595
    15263 7y7a:bV (4.3) BS01 PEB ? GO:0009507 ... A0A5J4YX63 36922595
    15264 7y7a:bV (4.3) BS02 PEB ? GO:0009507 ... A0A5J4YX63 36922595
    15265 7y7a:bV (4.3) BS03 PEB ? GO:0009507 ... A0A5J4YX63 36922595
    15266 7y7a:bV (4.3) BS04 PEB ? GO:0009507 ... A0A5J4YX63 36922595
    15267 7y7a:bW (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15268 7y7a:bW (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15269 7y7a:bW (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15270 7y7a:bb (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15271 7y7a:bb (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15272 7y7a:bb (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15273 7y7a:bb (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15274 7y7a:bd (4.3) BS01 PEB ? GO:0005615 ... A0A5J4ZA95 36922595
    15275 7y7a:be (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15276 7y7a:be (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15277 7y7a:be (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15278 7y7a:bj (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15279 7y7a:bj (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15280 7y7a:bj (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15281 7y7a:bl (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15282 7y7a:bl (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15283 7y7a:bl (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    15284 7y7a:bn (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15285 7y7a:bn (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15286 7y7a:bn (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15287 7y7a:bp (4.3) BS01 PEB ? GO:0009507 ... A0A5J4YX63 36922595
    15288 7y7a:bp (4.3) BS02 PEB ? GO:0009507 ... A0A5J4YX63 36922595
    15289 7y7a:bp (4.3) BS03 PEB ? GO:0009507 ... A0A5J4YX63 36922595
    15290 7y7a:bp (4.3) BS04 PEB ? GO:0009507 ... A0A5J4YX63 36922595
    15291 7y7a:c1 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15292 7y7a:c1 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15293 7y7a:c1 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15294 7y7a:c1 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15295 7y7a:c3 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15296 7y7a:c3 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15297 7y7a:c3 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15298 7y7a:c3 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15299 7y7a:c4 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15300 7y7a:c4 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15301 7y7a:c4 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15302 7y7a:c4 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15303 7y7a:c6 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15304 7y7a:c6 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15305 7y7a:c6 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15306 7y7a:c8 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15307 7y7a:c8 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15308 7y7a:c8 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15309 7y7a:c8 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15310 7y7a:cA (4.3) BS01 PEB ? N/A A0A5J4YX67 36922595
    15311 7y7a:cA (4.3) BS02 PEB ? N/A A0A5J4YX67 36922595
    15312 7y7a:cC (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15313 7y7a:cC (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15314 7y7a:cC (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15315 7y7a:cC (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15316 7y7a:cI (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15317 7y7a:cI (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15318 7y7a:cI (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15319 7y7a:cI (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15320 7y7a:cK (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15321 7y7a:cK (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15322 7y7a:cK (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15323 7y7a:cK (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15324 7y7a:cP (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15325 7y7a:cP (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15326 7y7a:cP (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15327 7y7a:cP (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15328 7y7a:cQ (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15329 7y7a:cQ (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15330 7y7a:cQ (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15331 7y7a:cR (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15332 7y7a:cR (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15333 7y7a:cR (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15334 7y7a:cR (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15335 7y7a:cS (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15336 7y7a:cS (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15337 7y7a:cS (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15338 7y7a:cS (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15339 7y7a:cT (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15340 7y7a:cT (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15341 7y7a:cT (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15342 7y7a:cV (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15343 7y7a:cV (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15344 7y7a:cV (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15345 7y7a:cV (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15346 7y7a:cW (4.3) BS01 PEB ? N/A A0A5J4YX67 36922595
    15347 7y7a:cW (4.3) BS02 PEB ? N/A A0A5J4YX67 36922595
    15348 7y7a:cb (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15349 7y7a:cb (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15350 7y7a:cb (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15351 7y7a:ce (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15352 7y7a:ce (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15353 7y7a:ce (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15354 7y7a:ce (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15355 7y7a:cj (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15356 7y7a:cj (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15357 7y7a:cj (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15358 7y7a:cj (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15359 7y7a:cl (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15360 7y7a:cl (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15361 7y7a:cl (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15362 7y7a:cl (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15363 7y7a:cn (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15364 7y7a:cn (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15365 7y7a:cn (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15366 7y7a:cn (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15367 7y7a:cp (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15368 7y7a:cp (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15369 7y7a:cp (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15370 7y7a:cp (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15371 7y7a:d1 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15372 7y7a:d1 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15373 7y7a:d1 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15374 7y7a:d2 (4.3) BS01 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15375 7y7a:d2 (4.3) BS02 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15376 7y7a:d2 (4.3) BS03 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15377 7y7a:d2 (4.3) BS04 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15378 7y7a:d2 (4.3) BS05 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15379 7y7a:d2 (4.3) BS06 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    15380 7y7a:d3 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15381 7y7a:d3 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15382 7y7a:d3 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15383 7y7a:d3 (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    15384 7y7a:d4 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15385 7y7a:d4 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15386 7y7a:d4 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15387 7y7a:d4 (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    15388 7y7a:d6 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15389 7y7a:d6 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15390 7y7a:d6 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15391 7y7a:d6 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    15392 7y7a:d8 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15393 7y7a:d8 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15394 7y7a:d8 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    15395 7y7a:dA (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    15396 7y7a:dA (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    15397 7y7a:dA (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    15398 7y7a:dC (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    15399 7y7a:dC (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    15400 7y7a:dC (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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