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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    14601 7y7a:WM (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14602 7y7a:WM (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14603 7y7a:WM (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    14604 7y7a:WP (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14605 7y7a:WP (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14606 7y7a:WP (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14607 7y7a:WQ (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14608 7y7a:WQ (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14609 7y7a:WQ (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14610 7y7a:WR (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14611 7y7a:WR (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14612 7y7a:WR (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14613 7y7a:WR (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    14614 7y7a:WS (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14615 7y7a:WS (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14616 7y7a:WS (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14617 7y7a:WT (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14618 7y7a:WT (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14619 7y7a:WT (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14620 7y7a:WU (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14621 7y7a:WU (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14622 7y7a:WV (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14623 7y7a:WV (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14624 7y7a:WV (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14625 7y7a:WV (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    14626 7y7a:WW (4.3) BS01 PEB ? N/A A0A5J4YX67 36922595
    14627 7y7a:WW (4.3) BS02 PEB ? N/A A0A5J4YX67 36922595
    14628 7y7a:Wa (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    14629 7y7a:Wa (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14630 7y7a:Wa (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14631 7y7a:Wa (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    14632 7y7a:Wb (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14633 7y7a:Wb (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14634 7y7a:Wb (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14635 7y7a:Wc (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    14636 7y7a:Wc (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14637 7y7a:Wc (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14638 7y7a:Wc (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    14639 7y7a:We (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14640 7y7a:We (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14641 7y7a:We (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14642 7y7a:Wf (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    14643 7y7a:Wf (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14644 7y7a:Wf (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14645 7y7a:Wf (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    14646 7y7a:Wg (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14647 7y7a:Wg (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14648 7y7a:Wg (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14649 7y7a:Wh (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    14650 7y7a:Wh (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14651 7y7a:Wh (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14652 7y7a:Wh (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    14653 7y7a:Wi (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14654 7y7a:Wi (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14655 7y7a:Wi (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14656 7y7a:Wj (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14657 7y7a:Wj (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14658 7y7a:Wj (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14659 7y7a:Wk (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    14660 7y7a:Wk (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14661 7y7a:Wk (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14662 7y7a:Wk (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    14663 7y7a:Wl (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14664 7y7a:Wl (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14665 7y7a:Wl (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14666 7y7a:Wn (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14667 7y7a:Wn (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14668 7y7a:Wn (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14669 7y7a:Wp (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14670 7y7a:Wp (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14671 7y7a:Wp (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14672 7y7a:Wp (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    14673 7y7a:X1 (4.3) BS01 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14674 7y7a:X1 (4.3) BS02 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14675 7y7a:X1 (4.3) BS03 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14676 7y7a:X1 (4.3) BS04 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14677 7y7a:X2 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14678 7y7a:X2 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14679 7y7a:X2 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14680 7y7a:X3 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    14681 7y7a:X3 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14682 7y7a:X3 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14683 7y7a:X4 (4.3) BS01 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14684 7y7a:X4 (4.3) BS02 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14685 7y7a:X4 (4.3) BS03 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14686 7y7a:X4 (4.3) BS04 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14687 7y7a:X5 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    14688 7y7a:X5 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14689 7y7a:X5 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14690 7y7a:X6 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    14691 7y7a:X6 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14692 7y7a:X6 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14693 7y7a:X6 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    14694 7y7a:X8 (4.3) BS01 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14695 7y7a:X8 (4.3) BS02 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14696 7y7a:X8 (4.3) BS03 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14697 7y7a:X8 (4.3) BS04 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14698 7y7a:XA (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    14699 7y7a:XA (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14700 7y7a:XA (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14701 7y7a:XA (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    14702 7y7a:XC (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    14703 7y7a:XC (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14704 7y7a:XC (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14705 7y7a:XC (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    14706 7y7a:XD (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    14707 7y7a:XD (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14708 7y7a:XD (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14709 7y7a:XF (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14710 7y7a:XF (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14711 7y7a:XF (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14712 7y7a:XH (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14713 7y7a:XH (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14714 7y7a:XH (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14715 7y7a:XI (4.3) BS01 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14716 7y7a:XI (4.3) BS02 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14717 7y7a:XI (4.3) BS03 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14718 7y7a:XI (4.3) BS04 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14719 7y7a:XJ (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14720 7y7a:XJ (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14721 7y7a:XJ (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14722 7y7a:XK (4.3) BS01 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14723 7y7a:XK (4.3) BS02 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14724 7y7a:XK (4.3) BS03 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14725 7y7a:XK (4.3) BS04 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14726 7y7a:XL (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    14727 7y7a:XL (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14728 7y7a:XL (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14729 7y7a:XM (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14730 7y7a:XM (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14731 7y7a:XM (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14732 7y7a:XP (4.3) BS01 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14733 7y7a:XP (4.3) BS02 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14734 7y7a:XP (4.3) BS03 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14735 7y7a:XP (4.3) BS04 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14736 7y7a:XQ (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    14737 7y7a:XQ (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14738 7y7a:XQ (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14739 7y7a:XQ (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    14740 7y7a:XR (4.3) BS01 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14741 7y7a:XR (4.3) BS02 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14742 7y7a:XR (4.3) BS03 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14743 7y7a:XR (4.3) BS04 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14744 7y7a:XS (4.3) BS01 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14745 7y7a:XS (4.3) BS02 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14746 7y7a:XS (4.3) BS03 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14747 7y7a:XS (4.3) BS04 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14748 7y7a:XT (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    14749 7y7a:XT (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14750 7y7a:XT (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14751 7y7a:XT (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    14752 7y7a:XU (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    14753 7y7a:XU (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14754 7y7a:XU (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14755 7y7a:XV (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    14756 7y7a:XV (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14757 7y7a:XV (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14758 7y7a:XV (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    14759 7y7a:XW (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    14760 7y7a:XW (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14761 7y7a:XW (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14762 7y7a:XW (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    14763 7y7a:Xa (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14764 7y7a:Xa (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14765 7y7a:Xb (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    14766 7y7a:Xb (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14767 7y7a:Xb (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14768 7y7a:Xb (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    14769 7y7a:Xc (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14770 7y7a:Xc (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14771 7y7a:Xc (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14772 7y7a:Xe (4.3) BS01 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14773 7y7a:Xe (4.3) BS02 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14774 7y7a:Xe (4.3) BS03 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14775 7y7a:Xe (4.3) BS04 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14776 7y7a:Xf (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14777 7y7a:Xf (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14778 7y7a:Xg (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    14779 7y7a:Xg (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14780 7y7a:Xg (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14781 7y7a:Xh (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14782 7y7a:Xh (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14783 7y7a:Xh (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14784 7y7a:Xi (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    14785 7y7a:Xi (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    14786 7y7a:Xi (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    14787 7y7a:Xj (4.3) BS01 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14788 7y7a:Xj (4.3) BS02 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14789 7y7a:Xj (4.3) BS03 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14790 7y7a:Xj (4.3) BS04 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14791 7y7a:Xk (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    14792 7y7a:Xk (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14793 7y7a:Xk (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    14794 7y7a:Xl (4.3) BS01 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14795 7y7a:Xl (4.3) BS02 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14796 7y7a:Xl (4.3) BS03 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14797 7y7a:Xl (4.3) BS04 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14798 7y7a:Xn (4.3) BS01 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14799 7y7a:Xn (4.3) BS02 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    14800 7y7a:Xn (4.3) BS03 PEB ? GO:0009507 ... A0A5J4YM59 36922595
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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