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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    13801 7y7a:QQ (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13802 7y7a:QR (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13803 7y7a:QR (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13804 7y7a:QR (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13805 7y7a:QS (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13806 7y7a:QS (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13807 7y7a:QS (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13808 7y7a:QT (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13809 7y7a:QT (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13810 7y7a:QT (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13811 7y7a:QT (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13812 7y7a:QU (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13813 7y7a:QU (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13814 7y7a:QU (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13815 7y7a:QV (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13816 7y7a:QV (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13817 7y7a:QV (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13818 7y7a:QV (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13819 7y7a:QW (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13820 7y7a:QW (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13821 7y7a:QW (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13822 7y7a:QW (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13823 7y7a:QW (4.3) BS05 PEB ? GO:0009507 ... P11393 36922595
    13824 7y7a:Qa (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13825 7y7a:Qa (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13826 7y7a:Qa (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13827 7y7a:Qb (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13828 7y7a:Qb (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13829 7y7a:Qb (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13830 7y7a:Qc (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13831 7y7a:Qc (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13832 7y7a:Qc (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13833 7y7a:Qc (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13834 7y7a:Qe (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13835 7y7a:Qe (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13836 7y7a:Qe (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13837 7y7a:Qe (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13838 7y7a:Qf (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13839 7y7a:Qf (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13840 7y7a:Qf (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13841 7y7a:Qg (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13842 7y7a:Qg (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13843 7y7a:Qg (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13844 7y7a:Qg (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13845 7y7a:Qh (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13846 7y7a:Qh (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13847 7y7a:Qh (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13848 7y7a:Qi (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13849 7y7a:Qi (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13850 7y7a:Qi (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13851 7y7a:Qi (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13852 7y7a:Qj (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13853 7y7a:Qj (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13854 7y7a:Qj (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13855 7y7a:Qj (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13856 7y7a:Qk (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13857 7y7a:Qk (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13858 7y7a:Qk (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13859 7y7a:Qk (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13860 7y7a:Ql (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13861 7y7a:Ql (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13862 7y7a:Ql (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13863 7y7a:Qn (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13864 7y7a:Qn (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13865 7y7a:Qn (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13866 7y7a:Qn (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13867 7y7a:Qp (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13868 7y7a:Qp (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13869 7y7a:Qp (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13870 7y7a:Qp (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13871 7y7a:R1 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13872 7y7a:R1 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13873 7y7a:R1 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13874 7y7a:R1 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13875 7y7a:R2 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13876 7y7a:R2 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13877 7y7a:R2 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13878 7y7a:R3 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13879 7y7a:R3 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13880 7y7a:R3 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13881 7y7a:R3 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13882 7y7a:R4 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13883 7y7a:R4 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13884 7y7a:R4 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13885 7y7a:R4 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13886 7y7a:R5 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13887 7y7a:R5 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13888 7y7a:R5 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13889 7y7a:R6 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13890 7y7a:R6 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13891 7y7a:R6 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13892 7y7a:R6 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13893 7y7a:R8 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13894 7y7a:R8 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13895 7y7a:R8 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13896 7y7a:R8 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13897 7y7a:RA (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13898 7y7a:RA (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13899 7y7a:RA (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13900 7y7a:RC (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13901 7y7a:RC (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13902 7y7a:RC (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13903 7y7a:RC (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13904 7y7a:RD (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13905 7y7a:RD (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13906 7y7a:RD (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13907 7y7a:RF (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13908 7y7a:RF (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13909 7y7a:RF (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13910 7y7a:RH (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13911 7y7a:RH (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13912 7y7a:RH (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13913 7y7a:RH (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13914 7y7a:RH (4.3) BS05 PEB ? GO:0009507 ... P11392 36922595
    13915 7y7a:RI (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13916 7y7a:RI (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13917 7y7a:RI (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13918 7y7a:RI (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13919 7y7a:RJ (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13920 7y7a:RJ (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13921 7y7a:RJ (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13922 7y7a:RK (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13923 7y7a:RK (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13924 7y7a:RK (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13925 7y7a:RK (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13926 7y7a:RL (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13927 7y7a:RL (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13928 7y7a:RL (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13929 7y7a:RL (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13930 7y7a:RM (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13931 7y7a:RM (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13932 7y7a:RM (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13933 7y7a:RP (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13934 7y7a:RP (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13935 7y7a:RP (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13936 7y7a:RP (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13937 7y7a:RQ (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13938 7y7a:RQ (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13939 7y7a:RQ (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13940 7y7a:RQ (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13941 7y7a:RR (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13942 7y7a:RR (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13943 7y7a:RR (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13944 7y7a:RR (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13945 7y7a:RS (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13946 7y7a:RS (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13947 7y7a:RS (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13948 7y7a:RS (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13949 7y7a:RT (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13950 7y7a:RT (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13951 7y7a:RT (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13952 7y7a:RT (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13953 7y7a:RU (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13954 7y7a:RU (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13955 7y7a:RU (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13956 7y7a:RU (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13957 7y7a:RV (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13958 7y7a:RV (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13959 7y7a:RV (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13960 7y7a:RV (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13961 7y7a:RW (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13962 7y7a:RW (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13963 7y7a:RW (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13964 7y7a:Ra (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13965 7y7a:Ra (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13966 7y7a:Ra (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13967 7y7a:Ra (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13968 7y7a:Rb (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13969 7y7a:Rb (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13970 7y7a:Rb (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13971 7y7a:Rb (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13972 7y7a:Rc (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13973 7y7a:Rc (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13974 7y7a:Rc (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13975 7y7a:Re (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13976 7y7a:Re (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13977 7y7a:Re (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13978 7y7a:Re (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13979 7y7a:Rf (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13980 7y7a:Rf (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13981 7y7a:Rf (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13982 7y7a:Rf (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13983 7y7a:Rg (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13984 7y7a:Rg (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13985 7y7a:Rg (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13986 7y7a:Rh (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13987 7y7a:Rh (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13988 7y7a:Rh (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13989 7y7a:Rh (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13990 7y7a:Rh (4.3) BS05 PEB ? GO:0009507 ... P11392 36922595
    13991 7y7a:Ri (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13992 7y7a:Ri (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13993 7y7a:Ri (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13994 7y7a:Rj (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13995 7y7a:Rj (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13996 7y7a:Rj (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13997 7y7a:Rj (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13998 7y7a:Rk (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13999 7y7a:Rk (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    14000 7y7a:Rk (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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