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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    13601 7y7a:Op (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13602 7y7a:Op (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13603 7y7a:Op (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13604 7y7a:Op (4.3) BS05 PEB ? GO:0009507 ... P11392 36922595
    13605 7y7a:P1 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13606 7y7a:P1 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13607 7y7a:P1 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13608 7y7a:P1 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13609 7y7a:P2 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13610 7y7a:P2 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13611 7y7a:P2 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13612 7y7a:P3 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13613 7y7a:P3 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13614 7y7a:P3 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13615 7y7a:P3 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13616 7y7a:P4 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13617 7y7a:P4 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13618 7y7a:P4 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13619 7y7a:P5 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13620 7y7a:P5 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13621 7y7a:P5 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13622 7y7a:P6 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13623 7y7a:P6 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13624 7y7a:P6 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13625 7y7a:P6 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13626 7y7a:P8 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13627 7y7a:P8 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13628 7y7a:P8 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13629 7y7a:P8 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13630 7y7a:PA (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13631 7y7a:PA (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13632 7y7a:PA (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13633 7y7a:PA (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13634 7y7a:PC (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13635 7y7a:PC (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13636 7y7a:PC (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13637 7y7a:PC (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13638 7y7a:PD (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13639 7y7a:PD (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13640 7y7a:PD (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13641 7y7a:PF (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13642 7y7a:PF (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13643 7y7a:PF (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13644 7y7a:PH (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13645 7y7a:PH (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13646 7y7a:PH (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13647 7y7a:PI (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13648 7y7a:PI (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13649 7y7a:PI (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13650 7y7a:PJ (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13651 7y7a:PJ (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13652 7y7a:PJ (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13653 7y7a:PK (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13654 7y7a:PK (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13655 7y7a:PK (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13656 7y7a:PK (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13657 7y7a:PL (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13658 7y7a:PL (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13659 7y7a:PL (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13660 7y7a:PL (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13661 7y7a:PM (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13662 7y7a:PM (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13663 7y7a:PM (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13664 7y7a:PP (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13665 7y7a:PP (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13666 7y7a:PP (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13667 7y7a:PQ (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13668 7y7a:PQ (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13669 7y7a:PQ (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13670 7y7a:PQ (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13671 7y7a:PR (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13672 7y7a:PR (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13673 7y7a:PR (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13674 7y7a:PR (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13675 7y7a:PS (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13676 7y7a:PS (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13677 7y7a:PS (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13678 7y7a:PT (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13679 7y7a:PT (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13680 7y7a:PT (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13681 7y7a:PT (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13682 7y7a:PU (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13683 7y7a:PU (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13684 7y7a:PU (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13685 7y7a:PU (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13686 7y7a:PV (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13687 7y7a:PV (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13688 7y7a:PV (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13689 7y7a:PV (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13690 7y7a:PW (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13691 7y7a:PW (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13692 7y7a:PW (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13693 7y7a:PW (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13694 7y7a:Pa (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13695 7y7a:Pa (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13696 7y7a:Pb (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13697 7y7a:Pb (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13698 7y7a:Pb (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13699 7y7a:Pb (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13700 7y7a:Pc (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13701 7y7a:Pc (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13702 7y7a:Pc (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13703 7y7a:Pe (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13704 7y7a:Pe (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13705 7y7a:Pe (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13706 7y7a:Pf (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13707 7y7a:Pf (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13708 7y7a:Pg (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13709 7y7a:Pg (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13710 7y7a:Pg (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13711 7y7a:Ph (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13712 7y7a:Ph (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13713 7y7a:Ph (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13714 7y7a:Pi (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13715 7y7a:Pi (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13716 7y7a:Pi (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13717 7y7a:Pj (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13718 7y7a:Pj (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13719 7y7a:Pj (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13720 7y7a:Pk (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13721 7y7a:Pk (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13722 7y7a:Pk (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13723 7y7a:Pl (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13724 7y7a:Pl (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13725 7y7a:Pl (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13726 7y7a:Pn (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13727 7y7a:Pn (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13728 7y7a:Pn (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13729 7y7a:Pp (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13730 7y7a:Pp (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13731 7y7a:Pp (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13732 7y7a:Pp (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13733 7y7a:Q1 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13734 7y7a:Q1 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13735 7y7a:Q1 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13736 7y7a:Q2 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13737 7y7a:Q2 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13738 7y7a:Q2 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13739 7y7a:Q2 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13740 7y7a:Q3 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13741 7y7a:Q3 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13742 7y7a:Q3 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13743 7y7a:Q3 (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13744 7y7a:Q4 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13745 7y7a:Q4 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13746 7y7a:Q4 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13747 7y7a:Q4 (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13748 7y7a:Q5 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13749 7y7a:Q5 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13750 7y7a:Q5 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13751 7y7a:Q5 (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13752 7y7a:Q6 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13753 7y7a:Q6 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13754 7y7a:Q6 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13755 7y7a:Q6 (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13756 7y7a:Q8 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13757 7y7a:Q8 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13758 7y7a:Q8 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13759 7y7a:QA (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13760 7y7a:QA (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13761 7y7a:QA (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13762 7y7a:QA (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13763 7y7a:QA (4.3) BS05 PEB ? GO:0009507 ... P11393 36922595
    13764 7y7a:QC (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13765 7y7a:QC (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13766 7y7a:QC (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13767 7y7a:QC (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13768 7y7a:QD (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13769 7y7a:QD (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13770 7y7a:QD (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13771 7y7a:QD (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    13772 7y7a:QF (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13773 7y7a:QF (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13774 7y7a:QF (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13775 7y7a:QF (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13776 7y7a:QH (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13777 7y7a:QH (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13778 7y7a:QH (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13779 7y7a:QI (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13780 7y7a:QI (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13781 7y7a:QI (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13782 7y7a:QJ (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13783 7y7a:QJ (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13784 7y7a:QJ (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13785 7y7a:QJ (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13786 7y7a:QK (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13787 7y7a:QK (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13788 7y7a:QK (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13789 7y7a:QL (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13790 7y7a:QL (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13791 7y7a:QL (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13792 7y7a:QM (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    13793 7y7a:QM (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    13794 7y7a:QM (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    13795 7y7a:QM (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13796 7y7a:QP (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13797 7y7a:QP (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    13798 7y7a:QP (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    13799 7y7a:QQ (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    13800 7y7a:QQ (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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