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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    12801 7y7a:Hf (4.3) BS05 PEB ? GO:0009507 ... P11393 36922595
    12802 7y7a:Hg (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12803 7y7a:Hg (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12804 7y7a:Hg (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12805 7y7a:Hg (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12806 7y7a:Hh (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12807 7y7a:Hh (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12808 7y7a:Hh (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12809 7y7a:Hi (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12810 7y7a:Hi (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12811 7y7a:Hi (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12812 7y7a:Hi (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12813 7y7a:Hj (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12814 7y7a:Hk (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12815 7y7a:Hk (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12816 7y7a:Hk (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12817 7y7a:Hk (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12818 7y7a:Hl (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12819 7y7a:Hn (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12820 7y7a:Hp (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12821 7y7a:Hp (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12822 7y7a:Hp (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12823 7y7a:Hp (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12824 7y7a:I1 (4.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    12825 7y7a:I2 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12826 7y7a:I2 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12827 7y7a:I2 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12828 7y7a:I2 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12829 7y7a:I3 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12830 7y7a:I3 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12831 7y7a:I3 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12832 7y7a:I3 (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12833 7y7a:I4 (4.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    12834 7y7a:I5 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12835 7y7a:I5 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12836 7y7a:I5 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12837 7y7a:I6 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12838 7y7a:I6 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12839 7y7a:I6 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12840 7y7a:I6 (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12841 7y7a:I8 (4.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    12842 7y7a:IA (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12843 7y7a:IA (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12844 7y7a:IA (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12845 7y7a:IC (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12846 7y7a:IC (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12847 7y7a:IC (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12848 7y7a:IC (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12849 7y7a:ID (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12850 7y7a:ID (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12851 7y7a:ID (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12852 7y7a:IF (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12853 7y7a:IF (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12854 7y7a:IF (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12855 7y7a:IF (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12856 7y7a:IH (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12857 7y7a:IH (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12858 7y7a:IH (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12859 7y7a:IH (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12860 7y7a:II (4.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    12861 7y7a:IJ (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12862 7y7a:IJ (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12863 7y7a:IJ (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12864 7y7a:IK (4.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    12865 7y7a:IL (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12866 7y7a:IL (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12867 7y7a:IL (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12868 7y7a:IM (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12869 7y7a:IM (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12870 7y7a:IM (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12871 7y7a:IM (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12872 7y7a:IP (4.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    12873 7y7a:IQ (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12874 7y7a:IQ (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12875 7y7a:IQ (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12876 7y7a:IQ (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12877 7y7a:IR (4.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    12878 7y7a:IS (4.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    12879 7y7a:IT (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12880 7y7a:IT (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12881 7y7a:IT (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12882 7y7a:IT (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12883 7y7a:IU (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12884 7y7a:IU (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12885 7y7a:IU (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12886 7y7a:IV (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12887 7y7a:IV (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12888 7y7a:IV (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12889 7y7a:IV (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12890 7y7a:IW (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12891 7y7a:IW (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12892 7y7a:IW (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12893 7y7a:Ia (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12894 7y7a:Ia (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12895 7y7a:Ib (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12896 7y7a:Ib (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12897 7y7a:Ib (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12898 7y7a:Ib (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12899 7y7a:Ic (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12900 7y7a:Ic (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12901 7y7a:Ic (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12902 7y7a:Ic (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12903 7y7a:Ie (4.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    12904 7y7a:If (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12905 7y7a:If (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12906 7y7a:Ig (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12907 7y7a:Ig (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12908 7y7a:Ig (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12909 7y7a:Ih (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12910 7y7a:Ih (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12911 7y7a:Ih (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12912 7y7a:Ih (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12913 7y7a:Ii (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12914 7y7a:Ii (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12915 7y7a:Ii (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12916 7y7a:Ij (4.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    12917 7y7a:Ik (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12918 7y7a:Ik (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12919 7y7a:Ik (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12920 7y7a:Il (4.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    12921 7y7a:In (4.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    12922 7y7a:Ip (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12923 7y7a:Ip (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12924 7y7a:Ip (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12925 7y7a:Ip (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12926 7y7a:J1 (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12927 7y7a:J2 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12928 7y7a:J2 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12929 7y7a:J2 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12930 7y7a:J3 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12931 7y7a:J3 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12932 7y7a:J3 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12933 7y7a:J3 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12934 7y7a:J4 (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12935 7y7a:J5 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12936 7y7a:J5 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12937 7y7a:J5 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12938 7y7a:J5 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12939 7y7a:J6 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12940 7y7a:J6 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12941 7y7a:J6 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12942 7y7a:J6 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12943 7y7a:J8 (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12944 7y7a:JA (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12945 7y7a:JA (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12946 7y7a:JC (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12947 7y7a:JC (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12948 7y7a:JC (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12949 7y7a:JC (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12950 7y7a:JC (4.3) BS05 PEB ? GO:0009507 ... P11393 36922595
    12951 7y7a:JD (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12952 7y7a:JD (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12953 7y7a:JD (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12954 7y7a:JD (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12955 7y7a:JF (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12956 7y7a:JF (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12957 7y7a:JF (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12958 7y7a:JH (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12959 7y7a:JH (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12960 7y7a:JH (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12961 7y7a:JI (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12962 7y7a:JJ (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12963 7y7a:JJ (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12964 7y7a:JJ (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12965 7y7a:JJ (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12966 7y7a:JK (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12967 7y7a:JL (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12968 7y7a:JL (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12969 7y7a:JL (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12970 7y7a:JL (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12971 7y7a:JM (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12972 7y7a:JM (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12973 7y7a:JM (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12974 7y7a:JP (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12975 7y7a:JQ (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12976 7y7a:JQ (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12977 7y7a:JQ (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12978 7y7a:JQ (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12979 7y7a:JR (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12980 7y7a:JS (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12981 7y7a:JT (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12982 7y7a:JT (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12983 7y7a:JT (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12984 7y7a:JT (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12985 7y7a:JU (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12986 7y7a:JU (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12987 7y7a:JU (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12988 7y7a:JU (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12989 7y7a:JV (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12990 7y7a:JV (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12991 7y7a:JV (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12992 7y7a:JV (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12993 7y7a:JV (4.3) BS05 PEB ? GO:0009507 ... P11393 36922595
    12994 7y7a:JW (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12995 7y7a:JW (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12996 7y7a:Ja (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12997 7y7a:Ja (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12998 7y7a:Ja (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12999 7y7a:Ja (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    13000 7y7a:Jb (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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