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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    11201 7y5e:cE (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11202 7y5e:cF (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11203 7y5e:cF (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11204 7y5e:cF (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    11205 7y5e:cG (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11206 7y5e:cG (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11207 7y5e:cG (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11208 7y5e:cG (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11209 7y5e:cH (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11210 7y5e:cH (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11211 7y5e:cH (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11212 7y5e:cH (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11213 7y5e:cJ (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11214 7y5e:cJ (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11215 7y5e:cJ (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11216 7y5e:cJ (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11217 7y5e:cK (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11218 7y5e:cK (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11219 7y5e:cK (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    11220 7y5e:cM (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11221 7y5e:cM (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11222 7y5e:cM (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11223 7y5e:cM (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11224 7y5e:cO (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11225 7y5e:cO (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11226 7y5e:cO (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11227 7y5e:cO (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11228 7y5e:d1 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11229 7y5e:d1 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11230 7y5e:d1 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    11231 7y5e:d4 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11232 7y5e:d4 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11233 7y5e:d4 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    11234 7y5e:d4 (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    11235 7y5e:dB (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11236 7y5e:dB (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11237 7y5e:dB (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11238 7y5e:dB (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11239 7y5e:dD (3.3) BS01 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    11240 7y5e:dD (3.3) BS02 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    11241 7y5e:dD (3.3) BS03 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    11242 7y5e:dD (3.3) BS04 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    11243 7y5e:dD (3.3) BS05 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    11244 7y5e:dD (3.3) BS06 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    11245 7y5e:dE (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11246 7y5e:dE (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11247 7y5e:dE (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    11248 7y5e:dF (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11249 7y5e:dF (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11250 7y5e:dF (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11251 7y5e:dF (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11252 7y5e:dG (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11253 7y5e:dG (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11254 7y5e:dG (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    11255 7y5e:dH (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11256 7y5e:dH (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11257 7y5e:dH (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    11258 7y5e:dJ (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11259 7y5e:dJ (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11260 7y5e:dJ (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    11261 7y5e:dJ (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    11262 7y5e:dK (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11263 7y5e:dK (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11264 7y5e:dK (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11265 7y5e:dK (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11266 7y5e:dM (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11267 7y5e:dM (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11268 7y5e:dM (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    11269 7y5e:dM (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    11270 7y5e:dO (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11271 7y5e:dO (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11272 7y5e:dO (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    11273 7y5e:dO (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    11274 7y5e:dQ (3.3) BS01 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    11275 7y5e:dQ (3.3) BS02 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    11276 7y5e:dQ (3.3) BS03 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    11277 7y5e:dQ (3.3) BS04 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    11278 7y5e:dQ (3.3) BS05 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    11279 7y5e:dQ (3.3) BS06 PEB ? GO:0009507 ... A0A5J4Z162 36922595
    11280 7y5e:e1 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11281 7y5e:e1 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11282 7y5e:e1 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11283 7y5e:e1 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11284 7y5e:e4 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11285 7y5e:e4 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11286 7y5e:e4 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11287 7y5e:e4 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11288 7y5e:e7 (3.3) BS01 PEB ? GO:0009507 ... A0A5J4Z7F4 36922595
    11289 7y5e:e7 (3.3) BS02 PEB ? GO:0009507 ... A0A5J4Z7F4 36922595
    11290 7y5e:e7 (3.3) BS03 PEB ? GO:0009507 ... A0A5J4Z7F4 36922595
    11291 7y5e:e7 (3.3) BS04 PEB ? GO:0009507 ... A0A5J4Z7F4 36922595
    11292 7y5e:e7 (3.3) BS05 PEB ? GO:0009507 ... A0A5J4Z7F4 36922595
    11293 7y5e:eA (3.3) BS01 PEB ? GO:0009507 ... A0A5J4Z7F4 36922595
    11294 7y5e:eA (3.3) BS02 PEB ? GO:0009507 ... A0A5J4Z7F4 36922595
    11295 7y5e:eA (3.3) BS03 PEB ? GO:0009507 ... A0A5J4Z7F4 36922595
    11296 7y5e:eA (3.3) BS04 PEB ? GO:0009507 ... A0A5J4Z7F4 36922595
    11297 7y5e:eB (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11298 7y5e:eB (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11299 7y5e:eB (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11300 7y5e:eB (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11301 7y5e:eE (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11302 7y5e:eE (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11303 7y5e:eE (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11304 7y5e:eE (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11305 7y5e:eF (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11306 7y5e:eF (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11307 7y5e:eF (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    11308 7y5e:eG (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11309 7y5e:eG (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11310 7y5e:eG (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11311 7y5e:eG (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11312 7y5e:eH (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11313 7y5e:eH (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11314 7y5e:eH (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11315 7y5e:eH (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11316 7y5e:eJ (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11317 7y5e:eJ (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11318 7y5e:eJ (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11319 7y5e:eJ (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11320 7y5e:eK (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11321 7y5e:eK (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11322 7y5e:eK (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    11323 7y5e:eM (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11324 7y5e:eM (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11325 7y5e:eM (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11326 7y5e:eM (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11327 7y5e:eO (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11328 7y5e:eO (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11329 7y5e:eO (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11330 7y5e:eO (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11331 7y5e:f1 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11332 7y5e:f1 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11333 7y5e:f1 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    11334 7y5e:f4 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11335 7y5e:f4 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11336 7y5e:f4 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    11337 7y5e:fB (3.3) BS01 PEB ? N/A A0A5J4Z027 36922595
    11338 7y5e:fB (3.3) BS02 PEB ? N/A A0A5J4Z027 36922595
    11339 7y5e:fE (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11340 7y5e:fE (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11341 7y5e:fE (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    11342 7y5e:fF (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11343 7y5e:fF (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11344 7y5e:fF (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11345 7y5e:fG (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11346 7y5e:fG (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11347 7y5e:fG (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    11348 7y5e:fH (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11349 7y5e:fH (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11350 7y5e:fH (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    11351 7y5e:fJ (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11352 7y5e:fJ (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    11353 7y5e:fJ (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    11354 7y5e:fJ (3.3) BS05 PEB ? GO:0009507 ... P11392 36922595
    11355 7y5e:fK (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11356 7y5e:fK (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11357 7y5e:fK (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11358 7y5e:fM (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11359 7y5e:fM (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11360 7y5e:fM (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    11361 7y5e:fM (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    11362 7y5e:fO (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11363 7y5e:fO (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11364 7y5e:fO (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    11365 7y5e:g1 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11366 7y5e:g1 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11367 7y5e:g1 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11368 7y5e:g1 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11369 7y5e:g4 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11370 7y5e:g4 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11371 7y5e:g4 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11372 7y5e:g4 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11373 7y5e:gB (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11374 7y5e:gB (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11375 7y5e:gB (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11376 7y5e:gE (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11377 7y5e:gE (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11378 7y5e:gE (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11379 7y5e:gF (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11380 7y5e:gF (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11381 7y5e:gG (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11382 7y5e:gG (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11383 7y5e:gG (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11384 7y5e:gH (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11385 7y5e:gH (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11386 7y5e:gH (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11387 7y5e:gH (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11388 7y5e:gJ (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11389 7y5e:gJ (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11390 7y5e:gJ (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11391 7y5e:gJ (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11392 7y5e:gK (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    11393 7y5e:gK (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    11394 7y5e:gM (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11395 7y5e:gM (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11396 7y5e:gM (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    11397 7y5e:gM (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    11398 7y5e:gO (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    11399 7y5e:gO (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    11400 7y5e:gO (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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