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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    10601 7y5e:SM (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10602 7y5e:SM (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    10603 7y5e:SO (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10604 7y5e:SO (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10605 7y5e:SO (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10606 7y5e:SO (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    10607 7y5e:SP (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10608 7y5e:SP (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10609 7y5e:SP (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10610 7y5e:SQ (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10611 7y5e:SQ (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10612 7y5e:SQ (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10613 7y5e:SQ (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10614 7y5e:T1 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10615 7y5e:T1 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10616 7y5e:T1 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10617 7y5e:T1 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10618 7y5e:T4 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10619 7y5e:T4 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10620 7y5e:T4 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10621 7y5e:T4 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10622 7y5e:T5 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10623 7y5e:T5 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10624 7y5e:T5 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10625 7y5e:T5 (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    10626 7y5e:T7 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10627 7y5e:T7 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10628 7y5e:T7 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10629 7y5e:T7 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10630 7y5e:T9 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10631 7y5e:T9 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10632 7y5e:T9 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10633 7y5e:TA (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10634 7y5e:TA (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10635 7y5e:TA (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10636 7y5e:TA (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10637 7y5e:TB (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10638 7y5e:TB (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10639 7y5e:TD (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10640 7y5e:TD (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10641 7y5e:TE (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10642 7y5e:TE (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10643 7y5e:TE (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10644 7y5e:TF (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10645 7y5e:TF (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10646 7y5e:TF (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10647 7y5e:TF (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10648 7y5e:TG (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10649 7y5e:TG (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10650 7y5e:TG (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10651 7y5e:TH (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10652 7y5e:TH (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10653 7y5e:TH (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10654 7y5e:TH (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10655 7y5e:TI (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10656 7y5e:TI (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10657 7y5e:TI (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10658 7y5e:TJ (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10659 7y5e:TJ (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10660 7y5e:TJ (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10661 7y5e:TJ (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10662 7y5e:TK (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10663 7y5e:TK (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10664 7y5e:TK (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10665 7y5e:TK (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10666 7y5e:TM (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10667 7y5e:TM (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10668 7y5e:TM (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10669 7y5e:TM (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10670 7y5e:TO (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10671 7y5e:TO (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10672 7y5e:TO (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10673 7y5e:TO (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10674 7y5e:TP (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10675 7y5e:TP (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10676 7y5e:TP (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10677 7y5e:TQ (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10678 7y5e:TQ (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10679 7y5e:U1 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10680 7y5e:U1 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10681 7y5e:U1 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10682 7y5e:U4 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10683 7y5e:U4 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10684 7y5e:U4 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10685 7y5e:U5 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10686 7y5e:U5 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10687 7y5e:U5 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10688 7y5e:U7 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10689 7y5e:U7 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10690 7y5e:U7 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10691 7y5e:U9 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10692 7y5e:U9 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10693 7y5e:U9 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10694 7y5e:U9 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10695 7y5e:U9 (3.3) BS05 PEB ? GO:0009507 ... P11393 36922595
    10696 7y5e:UA (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10697 7y5e:UA (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10698 7y5e:UA (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10699 7y5e:UB (3.3) BS01 PEB ? N/A A0A5J4YJY8 36922595
    10700 7y5e:UB (3.3) BS02 PEB ? N/A A0A5J4YJY8 36922595
    10701 7y5e:UB (3.3) BS03 PEB ? N/A A0A5J4YJY8 36922595
    10702 7y5e:UB (3.3) BS04 PEB ? N/A A0A5J4YJY8 36922595
    10703 7y5e:UB (3.3) BS05 PEB ? N/A A0A5J4YJY8 36922595
    10704 7y5e:UB (3.3) BS06 PEB ? N/A A0A5J4YJY8 36922595
    10705 7y5e:UB (3.3) BS07 PEB ? N/A A0A5J4YJY8 36922595
    10706 7y5e:UD (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10707 7y5e:UD (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10708 7y5e:UD (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10709 7y5e:UD (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10710 7y5e:UE (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10711 7y5e:UE (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10712 7y5e:UE (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10713 7y5e:UE (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    10714 7y5e:UF (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10715 7y5e:UF (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10716 7y5e:UF (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10717 7y5e:UG (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10718 7y5e:UG (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10719 7y5e:UG (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10720 7y5e:UG (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    10721 7y5e:UH (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10722 7y5e:UH (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10723 7y5e:UH (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10724 7y5e:UI (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10725 7y5e:UI (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10726 7y5e:UI (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10727 7y5e:UI (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10728 7y5e:UJ (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10729 7y5e:UJ (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10730 7y5e:UJ (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10731 7y5e:UK (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10732 7y5e:UK (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10733 7y5e:UK (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10734 7y5e:UM (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10735 7y5e:UM (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10736 7y5e:UM (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    10737 7y5e:UM (3.3) BS05 PEB ? GO:0009507 ... P11392 36922595
    10738 7y5e:UO (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10739 7y5e:UO (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10740 7y5e:UO (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10741 7y5e:UP (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10742 7y5e:UP (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10743 7y5e:UP (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10744 7y5e:UQ (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10745 7y5e:UQ (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10746 7y5e:UQ (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10747 7y5e:UQ (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10748 7y5e:V1 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10749 7y5e:V1 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10750 7y5e:V1 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10751 7y5e:V4 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10752 7y5e:V4 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10753 7y5e:V4 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10754 7y5e:V5 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10755 7y5e:V5 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10756 7y5e:V5 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10757 7y5e:V7 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10758 7y5e:V7 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10759 7y5e:V7 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10760 7y5e:V7 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10761 7y5e:V9 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10762 7y5e:V9 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10763 7y5e:VA (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10764 7y5e:VA (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10765 7y5e:VA (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10766 7y5e:VA (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10767 7y5e:VB (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10768 7y5e:VB (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10769 7y5e:VB (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10770 7y5e:VB (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10771 7y5e:VD (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10772 7y5e:VD (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10773 7y5e:VD (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10774 7y5e:VE (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10775 7y5e:VE (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10776 7y5e:VE (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10777 7y5e:VE (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10778 7y5e:VF (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10779 7y5e:VF (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10780 7y5e:VF (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10781 7y5e:VF (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10782 7y5e:VG (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10783 7y5e:VG (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10784 7y5e:VG (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10785 7y5e:VG (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10786 7y5e:VH (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10787 7y5e:VH (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10788 7y5e:VH (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10789 7y5e:VI (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    10790 7y5e:VI (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    10791 7y5e:VI (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    10792 7y5e:VJ (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10793 7y5e:VJ (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10794 7y5e:VJ (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10795 7y5e:VJ (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10796 7y5e:VK (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    10797 7y5e:VK (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    10798 7y5e:VK (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    10799 7y5e:VK (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    10800 7y5e:VM (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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