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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    9801 7y5e:F5 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9802 7y5e:F5 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9803 7y5e:F7 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9804 7y5e:F7 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9805 7y5e:F7 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9806 7y5e:F7 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9807 7y5e:F9 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9808 7y5e:F9 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9809 7y5e:F9 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9810 7y5e:F9 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9811 7y5e:FA (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9812 7y5e:FA (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9813 7y5e:FA (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9814 7y5e:FA (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9815 7y5e:FB (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9816 7y5e:FB (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9817 7y5e:FB (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9818 7y5e:FD (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9819 7y5e:FD (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9820 7y5e:FD (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9821 7y5e:FE (3.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    9822 7y5e:FF (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9823 7y5e:FF (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9824 7y5e:FF (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9825 7y5e:FF (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9826 7y5e:FG (3.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    9827 7y5e:FH (3.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    9828 7y5e:FH (3.3) BS02 PEB ? GO:0009507 ... P37208 36922595
    9829 7y5e:FI (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9830 7y5e:FI (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9831 7y5e:FI (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9832 7y5e:FJ (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9833 7y5e:FJ (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9834 7y5e:FJ (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9835 7y5e:FJ (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9836 7y5e:FK (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9837 7y5e:FK (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9838 7y5e:FK (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9839 7y5e:FK (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9840 7y5e:FM (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9841 7y5e:FM (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9842 7y5e:FM (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9843 7y5e:FM (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9844 7y5e:FO (3.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    9845 7y5e:FP (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9846 7y5e:FP (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9847 7y5e:FP (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9848 7y5e:FP (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9849 7y5e:FQ (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9850 7y5e:FQ (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9851 7y5e:FQ (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9852 7y5e:G1 (3.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    9853 7y5e:G4 (3.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    9854 7y5e:G4 (3.3) BS02 PEB ? GO:0009507 ... P37207 36922595
    9855 7y5e:G5 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9856 7y5e:G5 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9857 7y5e:G5 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9858 7y5e:G5 (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    9859 7y5e:G7 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9860 7y5e:G7 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9861 7y5e:G7 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9862 7y5e:G7 (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    9863 7y5e:G9 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9864 7y5e:G9 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9865 7y5e:G9 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9866 7y5e:GA (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9867 7y5e:GA (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9868 7y5e:GA (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9869 7y5e:GA (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    9870 7y5e:GB (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9871 7y5e:GB (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9872 7y5e:GB (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9873 7y5e:GD (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9874 7y5e:GD (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9875 7y5e:GD (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9876 7y5e:GD (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9877 7y5e:GE (3.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    9878 7y5e:GF (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9879 7y5e:GF (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9880 7y5e:GF (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9881 7y5e:GG (3.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    9882 7y5e:GH (3.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    9883 7y5e:GI (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9884 7y5e:GI (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9885 7y5e:GI (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9886 7y5e:GJ (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9887 7y5e:GJ (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9888 7y5e:GJ (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9889 7y5e:GK (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9890 7y5e:GK (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9891 7y5e:GK (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9892 7y5e:GM (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9893 7y5e:GM (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9894 7y5e:GM (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9895 7y5e:GM (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    9896 7y5e:GO (3.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    9897 7y5e:GO (3.3) BS02 PEB ? GO:0009507 ... P37207 36922595
    9898 7y5e:GP (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9899 7y5e:GP (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9900 7y5e:GP (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9901 7y5e:GQ (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9902 7y5e:GQ (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9903 7y5e:GQ (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9904 7y5e:GQ (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9905 7y5e:H1 (3.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    9906 7y5e:H4 (3.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    9907 7y5e:H5 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9908 7y5e:H5 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9909 7y5e:H5 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9910 7y5e:H7 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9911 7y5e:H7 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9912 7y5e:H7 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9913 7y5e:H7 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9914 7y5e:H9 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9915 7y5e:H9 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9916 7y5e:H9 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9917 7y5e:H9 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9918 7y5e:H9 (3.3) BS05 PEB ? GO:0009507 ... P11393 36922595
    9919 7y5e:HA (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9920 7y5e:HA (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9921 7y5e:HA (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9922 7y5e:HA (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9923 7y5e:HB (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9924 7y5e:HB (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9925 7y5e:HB (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9926 7y5e:HB (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9927 7y5e:HB (3.3) BS05 PEB ? GO:0009507 ... P11393 36922595
    9928 7y5e:HD (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9929 7y5e:HD (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9930 7y5e:HD (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9931 7y5e:HE (3.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    9932 7y5e:HF (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9933 7y5e:HF (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9934 7y5e:HF (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9935 7y5e:HF (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9936 7y5e:HG (3.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    9937 7y5e:HH (3.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    9938 7y5e:HI (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9939 7y5e:HI (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9940 7y5e:HI (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9941 7y5e:HI (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9942 7y5e:HJ (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9943 7y5e:HJ (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9944 7y5e:HJ (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9945 7y5e:HJ (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9946 7y5e:HK (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9947 7y5e:HK (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9948 7y5e:HK (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9949 7y5e:HK (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9950 7y5e:HM (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9951 7y5e:HM (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9952 7y5e:HM (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9953 7y5e:HM (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9954 7y5e:HO (3.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    9955 7y5e:HP (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9956 7y5e:HP (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9957 7y5e:HP (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9958 7y5e:HQ (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9959 7y5e:HQ (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9960 7y5e:HQ (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9961 7y5e:I1 (3.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    9962 7y5e:I4 (3.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    9963 7y5e:I5 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9964 7y5e:I5 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9965 7y5e:I5 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9966 7y5e:I5 (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    9967 7y5e:I7 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9968 7y5e:I7 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9969 7y5e:I7 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9970 7y5e:I9 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9971 7y5e:I9 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9972 7y5e:IA (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9973 7y5e:IA (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9974 7y5e:IA (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9975 7y5e:IB (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9976 7y5e:IB (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9977 7y5e:IB (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9978 7y5e:ID (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9979 7y5e:ID (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9980 7y5e:ID (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9981 7y5e:ID (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9982 7y5e:IE (3.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    9983 7y5e:IF (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9984 7y5e:IF (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9985 7y5e:IF (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9986 7y5e:IF (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    9987 7y5e:IG (3.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    9988 7y5e:IH (3.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    9989 7y5e:II (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9990 7y5e:II (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9991 7y5e:II (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9992 7y5e:IJ (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9993 7y5e:IJ (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9994 7y5e:IJ (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9995 7y5e:IJ (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    9996 7y5e:IK (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9997 7y5e:IK (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9998 7y5e:IK (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9999 7y5e:IK (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    10000 7y5e:IM (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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