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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    9201 7y4l:j6 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9202 7y4l:j6 (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    9203 7y4l:j8 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9204 7y4l:j8 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9205 7y4l:j8 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9206 7y4l:j8 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9207 7y4l:jB (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9208 7y4l:jB (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9209 7y4l:jB (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9210 7y4l:jB (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    9211 7y4l:jC (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9212 7y4l:jC (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9213 7y4l:jC (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    9214 7y4l:jD (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9215 7y4l:jD (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9216 7y4l:jD (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9217 7y4l:jE (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9218 7y4l:jE (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9219 7y4l:jE (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9220 7y4l:jF (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9221 7y4l:jF (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9222 7y4l:jF (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9223 7y4l:jF (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9224 7y4l:jH (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9225 7y4l:jH (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9226 7y4l:jH (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9227 7y4l:jH (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    9228 7y4l:k2 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9229 7y4l:k2 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9230 7y4l:k2 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9231 7y4l:k2 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9232 7y4l:k4 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9233 7y4l:k4 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9234 7y4l:k4 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9235 7y4l:k4 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9236 7y4l:k6 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9237 7y4l:k6 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9238 7y4l:k6 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9239 7y4l:k8 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9240 7y4l:k8 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9241 7y4l:k8 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9242 7y4l:kB (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9243 7y4l:kB (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9244 7y4l:kB (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9245 7y4l:kC (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9246 7y4l:kC (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9247 7y4l:kC (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9248 7y4l:kC (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9249 7y4l:kD (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9250 7y4l:kD (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9251 7y4l:kD (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9252 7y4l:kD (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9253 7y4l:kE (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9254 7y4l:kE (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9255 7y4l:kE (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9256 7y4l:kE (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9257 7y4l:kF (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9258 7y4l:kF (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9259 7y4l:kF (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9260 7y4l:kH (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9261 7y4l:kH (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9262 7y4l:kH (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9263 7y4l:kH (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9264 7y4l:l2 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9265 7y4l:l2 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9266 7y4l:l2 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9267 7y4l:l4 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9268 7y4l:l4 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9269 7y4l:l4 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9270 7y4l:l4 (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    9271 7y4l:l4 (3.3) BS05 PEB ? GO:0009507 ... P11392 36922595
    9272 7y4l:l6 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9273 7y4l:l6 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9274 7y4l:l6 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9275 7y4l:l8 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9276 7y4l:l8 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9277 7y4l:l8 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9278 7y4l:l8 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9279 7y4l:lB (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9280 7y4l:lB (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9281 7y4l:lB (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9282 7y4l:lC (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9283 7y4l:lC (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9284 7y4l:lC (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9285 7y4l:lD (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9286 7y4l:lD (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9287 7y4l:lD (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    9288 7y4l:lE (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9289 7y4l:lE (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9290 7y4l:lE (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    9291 7y4l:lF (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9292 7y4l:lF (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9293 7y4l:lF (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9294 7y4l:lF (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9295 7y4l:lH (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9296 7y4l:lH (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9297 7y4l:lH (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    9298 7y4l:m2 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9299 7y4l:m2 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9300 7y4l:m2 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9301 7y4l:m2 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9302 7y4l:m4 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9303 7y4l:m4 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9304 7y4l:m4 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9305 7y4l:m6 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9306 7y4l:m6 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9307 7y4l:m6 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9308 7y4l:m8 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9309 7y4l:m8 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9310 7y4l:m8 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9311 7y4l:mB (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9312 7y4l:mB (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9313 7y4l:mB (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9314 7y4l:mC (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9315 7y4l:mC (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9316 7y4l:mC (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9317 7y4l:mC (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9318 7y4l:mD (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9319 7y4l:mD (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9320 7y4l:mD (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9321 7y4l:mD (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9322 7y4l:mE (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9323 7y4l:mE (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9324 7y4l:mE (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9325 7y4l:mE (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9326 7y4l:mF (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9327 7y4l:mF (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9328 7y4l:mF (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9329 7y4l:mH (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9330 7y4l:mH (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9331 7y4l:mH (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9332 7y4l:n8 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9333 7y4l:n8 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9334 7y4l:n8 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9335 7y4l:n8 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9336 7y4l:nF (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9337 7y4l:nF (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9338 7y4l:nF (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9339 7y4l:nF (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9340 7y4l:o8 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9341 7y4l:o8 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9342 7y4l:o8 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9343 7y4l:o8 (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    9344 7y4l:oF (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9345 7y4l:oF (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9346 7y4l:oF (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9347 7y4l:oF (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    9348 7y4l:p8 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9349 7y4l:p8 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9350 7y4l:p8 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9351 7y4l:p8 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9352 7y4l:pF (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9353 7y4l:pF (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9354 7y4l:pF (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9355 7y4l:pF (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9356 7y4l:q8 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9357 7y4l:q8 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9358 7y4l:q8 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9359 7y4l:q8 (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    9360 7y4l:qF (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9361 7y4l:qF (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9362 7y4l:qF (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9363 7y4l:qF (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    9364 7y4l:r8 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9365 7y4l:r8 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9366 7y4l:r8 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9367 7y4l:r8 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9368 7y4l:rF (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9369 7y4l:rF (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9370 7y4l:rF (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9371 7y4l:rF (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9372 7y4l:s8 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9373 7y4l:s8 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9374 7y4l:s8 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9375 7y4l:sF (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9376 7y4l:sF (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9377 7y4l:sF (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9378 7y4l:t8 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9379 7y4l:t8 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9380 7y4l:t8 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9381 7y4l:t8 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9382 7y4l:tF (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9383 7y4l:tF (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9384 7y4l:tF (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9385 7y4l:tF (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9386 7y4l:u8 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9387 7y4l:u8 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9388 7y4l:u8 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9389 7y4l:uF (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    9390 7y4l:uF (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    9391 7y4l:uF (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    9392 7y4l:v8 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9393 7y4l:v8 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9394 7y4l:v8 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9395 7y4l:v8 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9396 7y4l:vF (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    9397 7y4l:vF (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    9398 7y4l:vF (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    9399 7y4l:vF (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    9400 7y4l:w8 (3.3) BS01 PEB ? N/A A0A5J4YZM7 36922595
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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