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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    8201 7y4l:R2 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8202 7y4l:R2 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8203 7y4l:R2 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8204 7y4l:R2 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8205 7y4l:R4 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8206 7y4l:R4 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8207 7y4l:R4 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8208 7y4l:R4 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8209 7y4l:R5 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8210 7y4l:R5 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8211 7y4l:R5 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8212 7y4l:R6 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8213 7y4l:R6 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8214 7y4l:R6 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8215 7y4l:R6 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8216 7y4l:R7 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8217 7y4l:R7 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8218 7y4l:R7 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8219 7y4l:R7 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8220 7y4l:R8 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8221 7y4l:R8 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8222 7y4l:R8 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8223 7y4l:R8 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8224 7y4l:R9 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8225 7y4l:R9 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8226 7y4l:R9 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8227 7y4l:R9 (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    8228 7y4l:R9 (3.3) BS05 PEB ? GO:0009507 ... P11392 36922595
    8229 7y4l:RA (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8230 7y4l:RA (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8231 7y4l:RA (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8232 7y4l:RB (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8233 7y4l:RB (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8234 7y4l:RB (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8235 7y4l:RB (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8236 7y4l:RC (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8237 7y4l:RC (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8238 7y4l:RC (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8239 7y4l:RC (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8240 7y4l:RD (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8241 7y4l:RD (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8242 7y4l:RD (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8243 7y4l:RD (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8244 7y4l:RE (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8245 7y4l:RE (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8246 7y4l:RE (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8247 7y4l:RE (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8248 7y4l:RF (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8249 7y4l:RF (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8250 7y4l:RF (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8251 7y4l:RF (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8252 7y4l:RG (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8253 7y4l:RG (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8254 7y4l:RG (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8255 7y4l:RH (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8256 7y4l:RH (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8257 7y4l:RH (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8258 7y4l:RH (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8259 7y4l:RI (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8260 7y4l:RI (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8261 7y4l:RI (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8262 7y4l:RI (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    8263 7y4l:RJ (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8264 7y4l:RJ (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8265 7y4l:RJ (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8266 7y4l:RK (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8267 7y4l:RK (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8268 7y4l:RK (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8269 7y4l:S1 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8270 7y4l:S1 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8271 7y4l:S1 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8272 7y4l:S2 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8273 7y4l:S2 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8274 7y4l:S2 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8275 7y4l:S4 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8276 7y4l:S4 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8277 7y4l:S4 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8278 7y4l:S4 (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    8279 7y4l:S5 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8280 7y4l:S5 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8281 7y4l:S5 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8282 7y4l:S5 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8283 7y4l:S6 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8284 7y4l:S6 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8285 7y4l:S6 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8286 7y4l:S6 (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    8287 7y4l:S7 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8288 7y4l:S7 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8289 7y4l:S7 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8290 7y4l:S8 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8291 7y4l:S8 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8292 7y4l:S8 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8293 7y4l:S9 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8294 7y4l:S9 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8295 7y4l:S9 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8296 7y4l:SA (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8297 7y4l:SA (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8298 7y4l:SA (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8299 7y4l:SB (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8300 7y4l:SB (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8301 7y4l:SB (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8302 7y4l:SB (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    8303 7y4l:SC (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8304 7y4l:SC (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8305 7y4l:SC (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8306 7y4l:SD (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8307 7y4l:SD (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8308 7y4l:SD (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8309 7y4l:SE (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8310 7y4l:SE (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8311 7y4l:SE (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8312 7y4l:SF (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8313 7y4l:SF (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8314 7y4l:SF (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8315 7y4l:SG (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8316 7y4l:SG (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8317 7y4l:SG (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8318 7y4l:SH (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8319 7y4l:SH (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8320 7y4l:SH (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8321 7y4l:SH (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    8322 7y4l:SI (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8323 7y4l:SI (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8324 7y4l:SI (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8325 7y4l:SJ (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8326 7y4l:SJ (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8327 7y4l:SJ (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8328 7y4l:SJ (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8329 7y4l:SK (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8330 7y4l:SK (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8331 7y4l:SK (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8332 7y4l:T1 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8333 7y4l:T1 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8334 7y4l:T1 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8335 7y4l:T1 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8336 7y4l:T2 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8337 7y4l:T2 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8338 7y4l:T2 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8339 7y4l:T2 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8340 7y4l:T4 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8341 7y4l:T4 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8342 7y4l:T4 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8343 7y4l:T4 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8344 7y4l:T5 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8345 7y4l:T5 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8346 7y4l:T6 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8347 7y4l:T6 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8348 7y4l:T6 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8349 7y4l:T6 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8350 7y4l:T7 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8351 7y4l:T7 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8352 7y4l:T7 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8353 7y4l:T8 (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8354 7y4l:T8 (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8355 7y4l:T8 (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8356 7y4l:T8 (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8357 7y4l:T9 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8358 7y4l:T9 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8359 7y4l:T9 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8360 7y4l:T9 (3.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    8361 7y4l:TA (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8362 7y4l:TA (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8363 7y4l:TB (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8364 7y4l:TB (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8365 7y4l:TB (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8366 7y4l:TB (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8367 7y4l:TC (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8368 7y4l:TC (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8369 7y4l:TC (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8370 7y4l:TC (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8371 7y4l:TD (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8372 7y4l:TD (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8373 7y4l:TD (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8374 7y4l:TE (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8375 7y4l:TE (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8376 7y4l:TE (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8377 7y4l:TF (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8378 7y4l:TF (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8379 7y4l:TF (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8380 7y4l:TF (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8381 7y4l:TG (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8382 7y4l:TG (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8383 7y4l:TG (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8384 7y4l:TH (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8385 7y4l:TH (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8386 7y4l:TH (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8387 7y4l:TH (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8388 7y4l:TI (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8389 7y4l:TI (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8390 7y4l:TI (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8391 7y4l:TJ (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8392 7y4l:TJ (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8393 7y4l:TK (3.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    8394 7y4l:TK (3.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    8395 7y4l:TK (3.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    8396 7y4l:TK (3.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    8397 7y4l:U1 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    8398 7y4l:U1 (3.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    8399 7y4l:U1 (3.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    8400 7y4l:U2 (3.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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