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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

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BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    6401 7ezx:c1 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6402 7ezx:c1 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6403 7ezx:c1 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6404 7ezx:c1 (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6405 7ezx:c7 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6406 7ezx:c7 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6407 7ezx:c7 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6408 7ezx:c9 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6409 7ezx:c9 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6410 7ezx:c9 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6411 7ezx:cB (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6412 7ezx:cB (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6413 7ezx:cB (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6414 7ezx:cF (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6415 7ezx:cF (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6416 7ezx:cF (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6417 7ezx:cI (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6418 7ezx:cI (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6419 7ezx:cI (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6420 7ezx:cJ (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6421 7ezx:cJ (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6422 7ezx:cK (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6423 7ezx:cK (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6424 7ezx:cK (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6425 7ezx:cK (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6426 7ezx:cL (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6427 7ezx:cL (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6428 7ezx:cM (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6429 7ezx:cM (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6430 7ezx:cM (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6431 7ezx:d1 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6432 7ezx:d1 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6433 7ezx:d4 (3.0) BS01 PEB ? GO:0009507 ... A0A5J4Z162 N/A
    6434 7ezx:d4 (3.0) BS02 PEB ? GO:0009507 ... A0A5J4Z162 N/A
    6435 7ezx:d4 (3.0) BS03 PEB ? GO:0009507 ... A0A5J4Z162 N/A
    6436 7ezx:d4 (3.0) BS04 PEB ? GO:0009507 ... A0A5J4Z162 N/A
    6437 7ezx:d4 (3.0) BS05 PEB ? GO:0009507 ... A0A5J4Z162 N/A
    6438 7ezx:d4 (3.0) BS06 PEB ? GO:0009507 ... A0A5J4Z162 N/A
    6439 7ezx:d7 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6440 7ezx:d7 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6441 7ezx:d7 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6442 7ezx:d9 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6443 7ezx:d9 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6444 7ezx:d9 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6445 7ezx:dB (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6446 7ezx:dB (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6447 7ezx:dB (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6448 7ezx:dD (3.0) BS01 PEB ? GO:0009507 ... A0A5J4Z162 N/A
    6449 7ezx:dD (3.0) BS02 PEB ? GO:0009507 ... A0A5J4Z162 N/A
    6450 7ezx:dD (3.0) BS03 PEB ? GO:0009507 ... A0A5J4Z162 N/A
    6451 7ezx:dD (3.0) BS04 PEB ? GO:0009507 ... A0A5J4Z162 N/A
    6452 7ezx:dD (3.0) BS05 PEB ? GO:0009507 ... A0A5J4Z162 N/A
    6453 7ezx:dD (3.0) BS06 PEB ? GO:0009507 ... A0A5J4Z162 N/A
    6454 7ezx:dF (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6455 7ezx:dF (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6456 7ezx:dF (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6457 7ezx:dI (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6458 7ezx:dI (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6459 7ezx:dI (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6460 7ezx:dJ (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6461 7ezx:dJ (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6462 7ezx:dJ (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6463 7ezx:dK (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6464 7ezx:dK (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6465 7ezx:dL (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6466 7ezx:dL (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6467 7ezx:dL (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6468 7ezx:dM (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6469 7ezx:dM (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6470 7ezx:e1 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6471 7ezx:e1 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6472 7ezx:e1 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6473 7ezx:e1 (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6474 7ezx:e2 (3.0) BS01 PEB ? GO:0009507 ... A0A5J4Z7F4 N/A
    6475 7ezx:e2 (3.0) BS02 PEB ? GO:0009507 ... A0A5J4Z7F4 N/A
    6476 7ezx:e2 (3.0) BS03 PEB ? GO:0009507 ... A0A5J4Z7F4 N/A
    6477 7ezx:e7 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6478 7ezx:e7 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6479 7ezx:e7 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6480 7ezx:e9 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6481 7ezx:e9 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6482 7ezx:e9 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6483 7ezx:eB (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6484 7ezx:eB (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6485 7ezx:eB (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6486 7ezx:eB (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6487 7ezx:eF (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6488 7ezx:eF (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6489 7ezx:eF (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6490 7ezx:eF (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6491 7ezx:eI (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6492 7ezx:eI (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6493 7ezx:eI (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6494 7ezx:eI (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6495 7ezx:eJ (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6496 7ezx:eJ (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6497 7ezx:eK (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6498 7ezx:eK (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6499 7ezx:eK (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6500 7ezx:eK (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6501 7ezx:eL (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6502 7ezx:eL (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6503 7ezx:eM (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6504 7ezx:eM (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6505 7ezx:eM (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6506 7ezx:eM (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6507 7ezx:eR (3.0) BS01 PEB ? GO:0009507 ... A0A5J4Z7F4 N/A
    6508 7ezx:eR (3.0) BS02 PEB ? GO:0009507 ... A0A5J4Z7F4 N/A
    6509 7ezx:eR (3.0) BS03 PEB ? GO:0009507 ... A0A5J4Z7F4 N/A
    6510 7ezx:eR (3.0) BS04 PEB ? GO:0009507 ... A0A5J4Z7F4 N/A
    6511 7ezx:eR (3.0) BS05 PEB ? GO:0009507 ... A0A5J4Z7F4 N/A
    6512 7ezx:eR (3.0) BS06 PEB ? GO:0009507 ... A0A5J4Z7F4 N/A
    6513 7ezx:f1 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6514 7ezx:f1 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6515 7ezx:f1 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6516 7ezx:f7 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6517 7ezx:f7 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6518 7ezx:f7 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6519 7ezx:f9 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6520 7ezx:f9 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6521 7ezx:f9 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6522 7ezx:fB (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6523 7ezx:fB (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6524 7ezx:fB (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6525 7ezx:fF (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6526 7ezx:fF (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6527 7ezx:fF (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6528 7ezx:fI (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6529 7ezx:fI (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6530 7ezx:fI (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6531 7ezx:fJ (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6532 7ezx:fJ (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6533 7ezx:fJ (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6534 7ezx:fK (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6535 7ezx:fK (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6536 7ezx:fK (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6537 7ezx:fL (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6538 7ezx:fL (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6539 7ezx:fL (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6540 7ezx:fM (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6541 7ezx:fM (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6542 7ezx:fM (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6543 7ezx:g1 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6544 7ezx:g1 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6545 7ezx:g1 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6546 7ezx:g7 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6547 7ezx:g7 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6548 7ezx:g7 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6549 7ezx:g9 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6550 7ezx:g9 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6551 7ezx:g9 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6552 7ezx:gB (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6553 7ezx:gB (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6554 7ezx:gB (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6555 7ezx:gB (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6556 7ezx:gF (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6557 7ezx:gF (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6558 7ezx:gF (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6559 7ezx:gF (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6560 7ezx:gI (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6561 7ezx:gI (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6562 7ezx:gI (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6563 7ezx:gI (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6564 7ezx:gJ (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6565 7ezx:gJ (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6566 7ezx:gK (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6567 7ezx:gK (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6568 7ezx:gK (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6569 7ezx:gL (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6570 7ezx:gL (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6571 7ezx:gM (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6572 7ezx:gM (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6573 7ezx:gM (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6574 7ezx:gM (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6575 7ezx:h1 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6576 7ezx:h1 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6577 7ezx:h7 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6578 7ezx:h7 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6579 7ezx:h7 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6580 7ezx:h9 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6581 7ezx:h9 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6582 7ezx:h9 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6583 7ezx:hB (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6584 7ezx:hB (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6585 7ezx:hB (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6586 7ezx:hF (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6587 7ezx:hF (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6588 7ezx:hF (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6589 7ezx:hI (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6590 7ezx:hI (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6591 7ezx:hI (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6592 7ezx:hJ (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6593 7ezx:hJ (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6594 7ezx:hJ (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6595 7ezx:hK (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6596 7ezx:hK (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6597 7ezx:hK (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6598 7ezx:hL (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6599 7ezx:hL (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6600 7ezx:hL (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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