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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    6201 7ezx:W7 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6202 7ezx:W9 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6203 7ezx:W9 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6204 7ezx:W9 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6205 7ezx:WB (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6206 7ezx:WB (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6207 7ezx:WB (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6208 7ezx:WB (3.0) BS04 PEB ? GO:0009507 ... E2IH77 N/A
    6209 7ezx:WF (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6210 7ezx:WF (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6211 7ezx:WF (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6212 7ezx:WI (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6213 7ezx:WI (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6214 7ezx:WI (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6215 7ezx:WJ (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6216 7ezx:WJ (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6217 7ezx:WK (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6218 7ezx:WK (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6219 7ezx:WK (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6220 7ezx:WL (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6221 7ezx:WL (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6222 7ezx:WM (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6223 7ezx:WM (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6224 7ezx:WM (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6225 7ezx:WM (3.0) BS04 PEB ? GO:0009507 ... E2IH77 N/A
    6226 7ezx:WR (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6227 7ezx:WR (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6228 7ezx:WR (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6229 7ezx:X1 (3.0) BS01 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6230 7ezx:X1 (3.0) BS02 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6231 7ezx:X1 (3.0) BS03 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6232 7ezx:X1 (3.0) BS04 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6233 7ezx:X2 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6234 7ezx:X2 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6235 7ezx:X2 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6236 7ezx:X2 (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6237 7ezx:X7 (3.0) BS01 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6238 7ezx:X7 (3.0) BS02 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6239 7ezx:X7 (3.0) BS03 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6240 7ezx:X7 (3.0) BS04 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6241 7ezx:X9 (3.0) BS01 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6242 7ezx:X9 (3.0) BS02 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6243 7ezx:X9 (3.0) BS03 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6244 7ezx:X9 (3.0) BS04 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6245 7ezx:XB (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6246 7ezx:XB (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6247 7ezx:XB (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6248 7ezx:XF (3.0) BS01 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6249 7ezx:XF (3.0) BS02 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6250 7ezx:XF (3.0) BS03 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6251 7ezx:XF (3.0) BS04 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6252 7ezx:XI (3.0) BS01 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6253 7ezx:XI (3.0) BS02 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6254 7ezx:XI (3.0) BS03 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6255 7ezx:XI (3.0) BS04 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6256 7ezx:XJ (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6257 7ezx:XJ (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6258 7ezx:XJ (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6259 7ezx:XK (3.0) BS01 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6260 7ezx:XK (3.0) BS02 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6261 7ezx:XK (3.0) BS03 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6262 7ezx:XK (3.0) BS04 PEB ? GO:0009507 ... A0A5J4YM59 N/A
    6263 7ezx:XL (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6264 7ezx:XL (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6265 7ezx:XL (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6266 7ezx:XM (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6267 7ezx:XM (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6268 7ezx:XM (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6269 7ezx:XR (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6270 7ezx:XR (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6271 7ezx:XR (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6272 7ezx:Y1 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6273 7ezx:Y1 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6274 7ezx:Y1 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6275 7ezx:Y1 (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6276 7ezx:Y7 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6277 7ezx:Y7 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6278 7ezx:Y7 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6279 7ezx:Y9 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6280 7ezx:Y9 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6281 7ezx:Y9 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6282 7ezx:YB (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6283 7ezx:YB (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6284 7ezx:YB (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6285 7ezx:YB (3.0) BS04 PEB ? GO:0009507 ... E2IH77 N/A
    6286 7ezx:YF (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6287 7ezx:YF (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6288 7ezx:YF (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6289 7ezx:YF (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6290 7ezx:YI (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6291 7ezx:YI (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6292 7ezx:YI (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6293 7ezx:YI (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6294 7ezx:YJ (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6295 7ezx:YJ (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6296 7ezx:YK (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6297 7ezx:YK (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6298 7ezx:YK (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6299 7ezx:YK (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6300 7ezx:YL (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6301 7ezx:YL (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6302 7ezx:YL (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6303 7ezx:YM (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6304 7ezx:YM (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6305 7ezx:YM (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6306 7ezx:YM (3.0) BS04 PEB ? GO:0009507 ... E2IH77 N/A
    6307 7ezx:Z1 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6308 7ezx:Z1 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6309 7ezx:Z1 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6310 7ezx:Z7 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6311 7ezx:Z7 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6312 7ezx:Z7 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6313 7ezx:Z9 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6314 7ezx:Z9 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6315 7ezx:Z9 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6316 7ezx:ZB (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6317 7ezx:ZB (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6318 7ezx:ZB (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6319 7ezx:ZF (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6320 7ezx:ZF (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6321 7ezx:ZF (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6322 7ezx:ZI (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6323 7ezx:ZI (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6324 7ezx:ZI (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6325 7ezx:ZJ (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6326 7ezx:ZJ (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6327 7ezx:ZJ (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6328 7ezx:ZK (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6329 7ezx:ZK (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6330 7ezx:ZK (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6331 7ezx:ZL (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6332 7ezx:ZL (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6333 7ezx:ZL (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6334 7ezx:ZM (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6335 7ezx:ZM (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6336 7ezx:ZM (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6337 7ezx:ZP (3.0) BS01 PEB ? N/A A0A5J4YTV6 N/A
    6338 7ezx:a1 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6339 7ezx:a1 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6340 7ezx:a1 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6341 7ezx:a7 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6342 7ezx:a7 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6343 7ezx:a7 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6344 7ezx:a9 (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6345 7ezx:a9 (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6346 7ezx:a9 (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6347 7ezx:aB (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6348 7ezx:aB (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6349 7ezx:aB (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6350 7ezx:aF (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6351 7ezx:aF (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6352 7ezx:aF (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6353 7ezx:aI (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6354 7ezx:aI (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6355 7ezx:aI (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6356 7ezx:aJ (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6357 7ezx:aJ (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6358 7ezx:aK (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6359 7ezx:aK (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6360 7ezx:aK (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6361 7ezx:aL (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6362 7ezx:aL (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6363 7ezx:aM (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6364 7ezx:aM (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6365 7ezx:aM (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6366 7ezx:b1 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6367 7ezx:b1 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6368 7ezx:b1 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6369 7ezx:b1 (3.0) BS04 PEB ? GO:0009507 ... E2IH77 N/A
    6370 7ezx:b7 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6371 7ezx:b7 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6372 7ezx:b7 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6373 7ezx:b9 (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6374 7ezx:b9 (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6375 7ezx:b9 (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6376 7ezx:bB (3.0) BS01 PEB ? GO:0009507 ... A0A5J4YX63 N/A
    6377 7ezx:bB (3.0) BS02 PEB ? GO:0009507 ... A0A5J4YX63 N/A
    6378 7ezx:bB (3.0) BS03 PEB ? GO:0009507 ... A0A5J4YX63 N/A
    6379 7ezx:bB (3.0) BS04 PEB ? GO:0009507 ... A0A5J4YX63 N/A
    6380 7ezx:bF (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6381 7ezx:bF (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6382 7ezx:bF (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6383 7ezx:bI (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6384 7ezx:bI (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6385 7ezx:bI (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6386 7ezx:bJ (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6387 7ezx:bJ (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6388 7ezx:bJ (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6389 7ezx:bJ (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6390 7ezx:bK (3.0) BS01 PEB ? GO:0009507 ... E2IH77 N/A
    6391 7ezx:bK (3.0) BS02 PEB ? GO:0009507 ... E2IH77 N/A
    6392 7ezx:bK (3.0) BS03 PEB ? GO:0009507 ... E2IH77 N/A
    6393 7ezx:bK (3.0) BS04 PEB ? GO:0009507 ... E2IH77 N/A
    6394 7ezx:bL (3.0) BS01 PEB ? GO:0009507 ... P11393 N/A
    6395 7ezx:bL (3.0) BS02 PEB ? GO:0009507 ... P11393 N/A
    6396 7ezx:bL (3.0) BS03 PEB ? GO:0009507 ... P11393 N/A
    6397 7ezx:bL (3.0) BS04 PEB ? GO:0009507 ... P11393 N/A
    6398 7ezx:bM (3.0) BS01 PEB ? GO:0009507 ... A0A5J4YX63 N/A
    6399 7ezx:bM (3.0) BS02 PEB ? GO:0009507 ... A0A5J4YX63 N/A
    6400 7ezx:bM (3.0) BS03 PEB ? GO:0009507 ... A0A5J4YX63 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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