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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    4801 6kgx:n4 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4802 6kgx:n4 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4803 6kgx:nE (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4804 6kgx:nE (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4805 6kgx:nE (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4806 6kgx:nE (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4807 6kgx:nG (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4808 6kgx:nG (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4809 6kgx:nG (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4810 6kgx:nG (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4811 6kgx:o1 (2.8) BS01 PEB N/A GO:0015979 ... N/A 32076272
    4812 6kgx:o1 (2.8) BS02 PEB N/A GO:0015979 ... N/A 32076272
    4813 6kgx:o1 (2.8) BS03 PEB N/A GO:0015979 ... N/A 32076272
    4814 6kgx:o1 (2.8) BS04 PEB N/A GO:0015979 ... N/A 32076272
    4815 6kgx:o1 (2.8) BS05 PEB N/A GO:0015979 ... N/A 32076272
    4816 6kgx:o4 (2.8) BS01 PEB N/A GO:0015979 ... N/A 32076272
    4817 6kgx:o4 (2.8) BS02 PEB N/A GO:0015979 ... N/A 32076272
    4818 6kgx:o4 (2.8) BS03 PEB N/A GO:0015979 ... N/A 32076272
    4819 6kgx:o4 (2.8) BS04 PEB N/A GO:0015979 ... N/A 32076272
    4820 6kgx:o4 (2.8) BS05 PEB N/A GO:0015979 ... N/A 32076272
    4821 6kgx:oE (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4822 6kgx:oE (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4823 6kgx:oE (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4824 6kgx:oE (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4825 6kgx:oG (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4826 6kgx:oG (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4827 6kgx:oG (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4828 6kgx:oG (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4829 6kgx:p1 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4830 6kgx:p1 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4831 6kgx:p1 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4832 6kgx:p4 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4833 6kgx:p4 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4834 6kgx:p4 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4835 6kgx:p4 (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4836 6kgx:pE (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4837 6kgx:pE (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4838 6kgx:pE (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4839 6kgx:pE (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4840 6kgx:pG (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4841 6kgx:pG (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4842 6kgx:pG (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4843 6kgx:pG (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4844 6kgx:q1 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4845 6kgx:q1 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4846 6kgx:q1 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4847 6kgx:q1 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4848 6kgx:q1 (2.8) BS05 PEB ? GO:0009507 ... P11393 32076272
    4849 6kgx:q4 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4850 6kgx:q4 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4851 6kgx:q4 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4852 6kgx:q4 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4853 6kgx:q4 (2.8) BS05 PEB ? GO:0009507 ... P11393 32076272
    4854 6kgx:qE (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4855 6kgx:qE (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4856 6kgx:qE (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4857 6kgx:qG (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4858 6kgx:qG (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4859 6kgx:qG (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4860 6kgx:qG (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4861 6kgx:r1 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4862 6kgx:r1 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4863 6kgx:r1 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4864 6kgx:r4 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4865 6kgx:r4 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4866 6kgx:r4 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4867 6kgx:rE (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4868 6kgx:rE (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4869 6kgx:rE (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4870 6kgx:rE (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4871 6kgx:rG (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4872 6kgx:rG (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4873 6kgx:rG (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4874 6kgx:rG (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4875 6kgx:s1 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4876 6kgx:s1 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4877 6kgx:s1 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4878 6kgx:s1 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4879 6kgx:s4 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4880 6kgx:s4 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4881 6kgx:s4 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4882 6kgx:s4 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4883 6kgx:sE (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4884 6kgx:sE (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4885 6kgx:sG (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4886 6kgx:sG (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4887 6kgx:sG (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4888 6kgx:t1 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4889 6kgx:t1 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4890 6kgx:t4 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4891 6kgx:t4 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4892 6kgx:t4 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4893 6kgx:t4 (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4894 6kgx:tE (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4895 6kgx:tE (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4896 6kgx:tE (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4897 6kgx:tE (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4898 6kgx:tG (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4899 6kgx:tG (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4900 6kgx:tG (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4901 6kgx:tG (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4902 6kgx:u1 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4903 6kgx:u1 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4904 6kgx:u1 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4905 6kgx:u1 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4906 6kgx:u4 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4907 6kgx:u4 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4908 6kgx:u4 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4909 6kgx:u4 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4910 6kgx:uE (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4911 6kgx:uE (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4912 6kgx:uE (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4913 6kgx:uG (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4914 6kgx:uG (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4915 6kgx:uG (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4916 6kgx:v1 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4917 6kgx:v1 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4918 6kgx:v1 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4919 6kgx:v4 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4920 6kgx:v4 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4921 6kgx:v4 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4922 6kgx:v4 (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4923 6kgx:vE (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4924 6kgx:vE (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4925 6kgx:vE (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4926 6kgx:vE (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4927 6kgx:vG (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4928 6kgx:vG (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4929 6kgx:vG (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4930 6kgx:vG (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4931 6kgx:w1 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4932 6kgx:w1 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4933 6kgx:w1 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4934 6kgx:w1 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4935 6kgx:w4 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4936 6kgx:w4 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4937 6kgx:w4 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4938 6kgx:w4 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4939 6kgx:w4 (2.8) BS05 PEB ? GO:0009507 ... P11393 32076272
    4940 6kgx:wE (2.8) BS01 PEB N/A N/A N/A 32076272
    4941 6kgx:wE (2.8) BS02 PEB N/A N/A N/A 32076272
    4942 6kgx:wE (2.8) BS03 PEB N/A N/A N/A 32076272
    4943 6kgx:wE (2.8) BS04 PEB N/A N/A N/A 32076272
    4944 6kgx:wE (2.8) BS05 PEB N/A N/A N/A 32076272
    4945 6kgx:wE (2.8) BS06 PEB N/A N/A N/A 32076272
    4946 6kgx:wE (2.8) BS07 PEB N/A N/A N/A 32076272
    4947 6kgx:wE (2.8) BS08 PEB N/A N/A N/A 32076272
    4948 6kgx:wE (2.8) BS09 PEB N/A N/A N/A 32076272
    4949 6kgx:wG (2.8) BS01 PEB N/A N/A N/A 32076272
    4950 6kgx:wG (2.8) BS02 PEB N/A N/A N/A 32076272
    4951 6kgx:wG (2.8) BS03 PEB N/A N/A N/A 32076272
    4952 6kgx:wG (2.8) BS04 PEB N/A N/A N/A 32076272
    4953 6kgx:wG (2.8) BS05 PEB N/A N/A N/A 32076272
    4954 6kgx:wG (2.8) BS06 PEB N/A N/A N/A 32076272
    4955 6kgx:wG (2.8) BS07 PEB N/A N/A N/A 32076272
    4956 6kgx:wG (2.8) BS08 PEB N/A N/A N/A 32076272
    4957 6kgx:wG (2.8) BS09 PEB N/A N/A N/A 32076272
    4958 6kgx:x1 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4959 6kgx:x1 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4960 6kgx:x1 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4961 6kgx:x1 (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4962 6kgx:x4 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4963 6kgx:x4 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4964 6kgx:x4 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4965 6kgx:x4 (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4966 6kgx:xE (2.8) BS01 PEB N/A N/A N/A 32076272
    4967 6kgx:xE (2.8) BS02 PEB N/A N/A N/A 32076272
    4968 6kgx:xE (2.8) BS03 PEB N/A N/A N/A 32076272
    4969 6kgx:xE (2.8) BS04 PEB N/A N/A N/A 32076272
    4970 6kgx:xE (2.8) BS05 PEB N/A N/A N/A 32076272
    4971 6kgx:xE (2.8) BS06 PEB N/A N/A N/A 32076272
    4972 6kgx:xE (2.8) BS08 PEB N/A N/A N/A 32076272
    4973 6kgx:xE (2.8) BS09 PEB N/A N/A N/A 32076272
    4974 6kgx:xE (2.8) BS10 PEB N/A N/A N/A 32076272
    4975 6kgx:xG (2.8) BS01 PEB N/A N/A N/A 32076272
    4976 6kgx:xG (2.8) BS02 PEB N/A N/A N/A 32076272
    4977 6kgx:xG (2.8) BS03 PEB N/A N/A N/A 32076272
    4978 6kgx:xG (2.8) BS04 PEB N/A N/A N/A 32076272
    4979 6kgx:xG (2.8) BS05 PEB N/A N/A N/A 32076272
    4980 6kgx:xG (2.8) BS07 PEB N/A N/A N/A 32076272
    4981 6kgx:xG (2.8) BS08 PEB N/A N/A N/A 32076272
    4982 6kgx:xG (2.8) BS09 PEB N/A N/A N/A 32076272
    4983 6kgx:y1 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4984 6kgx:y1 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4985 6kgx:y1 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4986 6kgx:y4 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4987 6kgx:y4 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4988 6kgx:y4 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4989 6kgx:y4 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4990 6kgx:yE (2.8) BS01 PEB N/A N/A N/A 32076272
    4991 6kgx:yE (2.8) BS02 PEB N/A N/A N/A 32076272
    4992 6kgx:yE (2.8) BS03 PEB N/A N/A N/A 32076272
    4993 6kgx:yE (2.8) BS04 PEB N/A N/A N/A 32076272
    4994 6kgx:yE (2.8) BS05 PEB N/A N/A N/A 32076272
    4995 6kgx:yE (2.8) BS06 PEB N/A N/A N/A 32076272
    4996 6kgx:yG (2.8) BS01 PEB N/A N/A N/A 32076272
    4997 6kgx:yG (2.8) BS02 PEB N/A N/A N/A 32076272
    4998 6kgx:yG (2.8) BS03 PEB N/A N/A N/A 32076272
    4999 6kgx:yG (2.8) BS04 PEB N/A N/A N/A 32076272
    5000 6kgx:yG (2.8) BS05 PEB N/A N/A N/A 32076272
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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