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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    4401 6kgx:dE (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4402 6kgx:dE (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4403 6kgx:dF (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4404 6kgx:dF (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4405 6kgx:dF (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4406 6kgx:dG (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4407 6kgx:dG (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4408 6kgx:dG (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4409 6kgx:dG (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4410 6kgx:dI (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4411 6kgx:dI (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4412 6kgx:dI (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4413 6kgx:dI (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4414 6kgx:dJ (2.8) BS01 PEB N/A GO:0015979 ... N/A 32076272
    4415 6kgx:dJ (2.8) BS02 PEB N/A GO:0015979 ... N/A 32076272
    4416 6kgx:dJ (2.8) BS03 PEB N/A GO:0015979 ... N/A 32076272
    4417 6kgx:dJ (2.8) BS04 PEB N/A GO:0015979 ... N/A 32076272
    4418 6kgx:e1 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4419 6kgx:e1 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4420 6kgx:e1 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4421 6kgx:e1 (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4422 6kgx:e2 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4423 6kgx:e2 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4424 6kgx:e2 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4425 6kgx:e2 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4426 6kgx:e3 (2.8) BS01 PEB N/A GO:0015979 ... N/A 32076272
    4427 6kgx:e3 (2.8) BS02 PEB N/A GO:0015979 ... N/A 32076272
    4428 6kgx:e3 (2.8) BS03 PEB N/A GO:0015979 ... N/A 32076272
    4429 6kgx:e3 (2.8) BS04 PEB N/A GO:0015979 ... N/A 32076272
    4430 6kgx:e4 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4431 6kgx:e4 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4432 6kgx:e4 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4433 6kgx:e4 (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4434 6kgx:e6 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4435 6kgx:e6 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4436 6kgx:e6 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4437 6kgx:e6 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4438 6kgx:e7 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4439 6kgx:e7 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4440 6kgx:e7 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4441 6kgx:e7 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4442 6kgx:e8 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4443 6kgx:e8 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4444 6kgx:e8 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4445 6kgx:e8 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4446 6kgx:eA (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4447 6kgx:eA (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4448 6kgx:eA (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4449 6kgx:eA (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4450 6kgx:eB (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4451 6kgx:eB (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4452 6kgx:eB (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4453 6kgx:eB (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4454 6kgx:eD (2.8) BS01 PEB N/A GO:0015979 ... N/A 32076272
    4455 6kgx:eD (2.8) BS02 PEB N/A GO:0015979 ... N/A 32076272
    4456 6kgx:eD (2.8) BS03 PEB N/A GO:0015979 ... N/A 32076272
    4457 6kgx:eD (2.8) BS04 PEB N/A GO:0015979 ... N/A 32076272
    4458 6kgx:eE (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4459 6kgx:eE (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4460 6kgx:eE (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4461 6kgx:eF (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4462 6kgx:eF (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4463 6kgx:eF (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4464 6kgx:eF (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4465 6kgx:eG (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4466 6kgx:eG (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4467 6kgx:eG (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4468 6kgx:eI (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4469 6kgx:eI (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4470 6kgx:eI (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4471 6kgx:eI (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4472 6kgx:f1 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4473 6kgx:f1 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4474 6kgx:f1 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4475 6kgx:f1 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4476 6kgx:f2 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4477 6kgx:f2 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4478 6kgx:f2 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4479 6kgx:f4 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4480 6kgx:f4 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4481 6kgx:f4 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4482 6kgx:f4 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4483 6kgx:f6 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4484 6kgx:f6 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4485 6kgx:f6 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4486 6kgx:f7 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4487 6kgx:f7 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4488 6kgx:f7 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4489 6kgx:f8 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4490 6kgx:f8 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4491 6kgx:f8 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4492 6kgx:f8 (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4493 6kgx:fA (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4494 6kgx:fA (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4495 6kgx:fA (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4496 6kgx:fA (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4497 6kgx:fB (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4498 6kgx:fB (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4499 6kgx:fB (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4500 6kgx:fE (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4501 6kgx:fE (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4502 6kgx:fE (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4503 6kgx:fF (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4504 6kgx:fF (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4505 6kgx:fF (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4506 6kgx:fG (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4507 6kgx:fG (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4508 6kgx:fG (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4509 6kgx:fI (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4510 6kgx:fI (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4511 6kgx:fI (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4512 6kgx:g1 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4513 6kgx:g1 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4514 6kgx:g1 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4515 6kgx:g2 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4516 6kgx:g2 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4517 6kgx:g2 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4518 6kgx:g2 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4519 6kgx:g4 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4520 6kgx:g4 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4521 6kgx:g4 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4522 6kgx:g4 (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4523 6kgx:g6 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4524 6kgx:g6 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4525 6kgx:g6 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4526 6kgx:g7 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4527 6kgx:g7 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4528 6kgx:g7 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4529 6kgx:g7 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4530 6kgx:g8 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4531 6kgx:g8 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4532 6kgx:g8 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4533 6kgx:g8 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4534 6kgx:gA (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4535 6kgx:gA (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4536 6kgx:gA (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4537 6kgx:gA (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4538 6kgx:gB (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4539 6kgx:gB (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4540 6kgx:gB (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4541 6kgx:gE (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4542 6kgx:gE (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4543 6kgx:gF (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4544 6kgx:gF (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4545 6kgx:gF (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4546 6kgx:gF (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4547 6kgx:gG (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4548 6kgx:gG (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4549 6kgx:gI (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4550 6kgx:gI (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4551 6kgx:gI (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4552 6kgx:gI (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4553 6kgx:h1 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4554 6kgx:h1 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4555 6kgx:h1 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4556 6kgx:h1 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4557 6kgx:h2 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4558 6kgx:h2 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4559 6kgx:h2 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4560 6kgx:h4 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4561 6kgx:h4 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4562 6kgx:h4 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4563 6kgx:h4 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4564 6kgx:h6 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4565 6kgx:h6 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4566 6kgx:h7 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4567 6kgx:h7 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4568 6kgx:h7 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4569 6kgx:h8 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4570 6kgx:h8 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4571 6kgx:h8 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4572 6kgx:h8 (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4573 6kgx:hA (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4574 6kgx:hA (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4575 6kgx:hA (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4576 6kgx:hA (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4577 6kgx:hB (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4578 6kgx:hB (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4579 6kgx:hB (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4580 6kgx:hB (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4581 6kgx:hE (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4582 6kgx:hE (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4583 6kgx:hE (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4584 6kgx:hF (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4585 6kgx:hF (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4586 6kgx:hF (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4587 6kgx:hG (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4588 6kgx:hG (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4589 6kgx:hG (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4590 6kgx:hG (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4591 6kgx:hI (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4592 6kgx:hI (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4593 6kgx:hI (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4594 6kgx:i1 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4595 6kgx:i1 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4596 6kgx:i1 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4597 6kgx:i1 (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4598 6kgx:i2 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4599 6kgx:i2 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4600 6kgx:i2 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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