Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    4001 6kgx:VI (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4002 6kgx:VI (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4003 6kgx:VJ (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4004 6kgx:VJ (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4005 6kgx:W1 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4006 6kgx:W1 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4007 6kgx:W1 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4008 6kgx:W1 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4009 6kgx:W2 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4010 6kgx:W2 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4011 6kgx:W2 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4012 6kgx:W3 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4013 6kgx:W3 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4014 6kgx:W3 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4015 6kgx:W4 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4016 6kgx:W4 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4017 6kgx:W4 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4018 6kgx:W4 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4019 6kgx:W6 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4020 6kgx:W6 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4021 6kgx:W6 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4022 6kgx:W6 (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4023 6kgx:W7 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4024 6kgx:W7 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4025 6kgx:W7 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4026 6kgx:W8 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4027 6kgx:W8 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4028 6kgx:W8 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4029 6kgx:W9 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4030 6kgx:W9 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4031 6kgx:W9 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4032 6kgx:W9 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4033 6kgx:WA (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4034 6kgx:WA (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4035 6kgx:WA (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4036 6kgx:WB (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4037 6kgx:WB (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4038 6kgx:WB (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4039 6kgx:WB (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4040 6kgx:WD (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4041 6kgx:WD (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4042 6kgx:WD (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4043 6kgx:WE (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4044 6kgx:WE (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4045 6kgx:WE (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4046 6kgx:WF (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4047 6kgx:WF (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4048 6kgx:WF (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4049 6kgx:WG (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4050 6kgx:WG (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4051 6kgx:WG (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4052 6kgx:WI (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4053 6kgx:WI (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4054 6kgx:WI (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4055 6kgx:WJ (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4056 6kgx:WJ (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4057 6kgx:WJ (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4058 6kgx:WJ (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4059 6kgx:X1 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4060 6kgx:X1 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4061 6kgx:X1 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4062 6kgx:X2 (2.8) BS01 PEB N/A GO:0015979 ... N/A 32076272
    4063 6kgx:X2 (2.8) BS02 PEB N/A GO:0015979 ... N/A 32076272
    4064 6kgx:X2 (2.8) BS03 PEB N/A GO:0015979 ... N/A 32076272
    4065 6kgx:X2 (2.8) BS04 PEB N/A GO:0015979 ... N/A 32076272
    4066 6kgx:X3 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4067 6kgx:X3 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4068 6kgx:X3 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4069 6kgx:X4 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4070 6kgx:X4 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4071 6kgx:X4 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4072 6kgx:X6 (2.8) BS01 PEB N/A GO:0015979 ... N/A 32076272
    4073 6kgx:X6 (2.8) BS02 PEB N/A GO:0015979 ... N/A 32076272
    4074 6kgx:X6 (2.8) BS03 PEB N/A GO:0015979 ... N/A 32076272
    4075 6kgx:X6 (2.8) BS04 PEB N/A GO:0015979 ... N/A 32076272
    4076 6kgx:X7 (2.8) BS01 PEB N/A GO:0015979 ... N/A 32076272
    4077 6kgx:X7 (2.8) BS02 PEB N/A GO:0015979 ... N/A 32076272
    4078 6kgx:X7 (2.8) BS03 PEB N/A GO:0015979 ... N/A 32076272
    4079 6kgx:X7 (2.8) BS04 PEB N/A GO:0015979 ... N/A 32076272
    4080 6kgx:X8 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4081 6kgx:X8 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4082 6kgx:X8 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4083 6kgx:X8 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4084 6kgx:X9 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4085 6kgx:X9 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4086 6kgx:X9 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4087 6kgx:XA (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4088 6kgx:XA (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4089 6kgx:XA (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4090 6kgx:XA (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4091 6kgx:XB (2.8) BS01 PEB N/A GO:0015979 ... N/A 32076272
    4092 6kgx:XB (2.8) BS02 PEB N/A GO:0015979 ... N/A 32076272
    4093 6kgx:XB (2.8) BS03 PEB N/A GO:0015979 ... N/A 32076272
    4094 6kgx:XB (2.8) BS04 PEB N/A GO:0015979 ... N/A 32076272
    4095 6kgx:XD (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4096 6kgx:XD (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4097 6kgx:XD (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4098 6kgx:XE (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4099 6kgx:XE (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4100 6kgx:XE (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4101 6kgx:XE (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4102 6kgx:XF (2.8) BS01 PEB N/A GO:0015979 ... N/A 32076272
    4103 6kgx:XF (2.8) BS02 PEB N/A GO:0015979 ... N/A 32076272
    4104 6kgx:XF (2.8) BS03 PEB N/A GO:0015979 ... N/A 32076272
    4105 6kgx:XF (2.8) BS04 PEB N/A GO:0015979 ... N/A 32076272
    4106 6kgx:XG (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4107 6kgx:XG (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4108 6kgx:XG (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4109 6kgx:XG (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4110 6kgx:XI (2.8) BS01 PEB N/A GO:0015979 ... N/A 32076272
    4111 6kgx:XI (2.8) BS02 PEB N/A GO:0015979 ... N/A 32076272
    4112 6kgx:XI (2.8) BS03 PEB N/A GO:0015979 ... N/A 32076272
    4113 6kgx:XI (2.8) BS04 PEB N/A GO:0015979 ... N/A 32076272
    4114 6kgx:XJ (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4115 6kgx:XJ (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4116 6kgx:XJ (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4117 6kgx:Y1 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4118 6kgx:Y1 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4119 6kgx:Y1 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4120 6kgx:Y2 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4121 6kgx:Y2 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4122 6kgx:Y2 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4123 6kgx:Y3 (2.8) BS01 PEB N/A N/A N/A 32076272
    4124 6kgx:Y3 (2.8) BS02 PEB N/A N/A N/A 32076272
    4125 6kgx:Y3 (2.8) BS03 PEB N/A N/A N/A 32076272
    4126 6kgx:Y3 (2.8) BS04 PEB N/A N/A N/A 32076272
    4127 6kgx:Y3 (2.8) BS05 PEB N/A N/A N/A 32076272
    4128 6kgx:Y3 (2.8) BS07 PEB N/A N/A N/A 32076272
    4129 6kgx:Y3 (2.8) BS08 PEB N/A N/A N/A 32076272
    4130 6kgx:Y3 (2.8) BS10 PEB N/A N/A N/A 32076272
    4131 6kgx:Y3 (2.8) BS11 PEB N/A N/A N/A 32076272
    4132 6kgx:Y4 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4133 6kgx:Y4 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4134 6kgx:Y4 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4135 6kgx:Y6 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4136 6kgx:Y6 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4137 6kgx:Y6 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4138 6kgx:Y6 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4139 6kgx:Y7 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4140 6kgx:Y7 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4141 6kgx:Y7 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4142 6kgx:Y7 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4143 6kgx:Y8 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4144 6kgx:Y8 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4145 6kgx:Y8 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4146 6kgx:Y8 (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4147 6kgx:Y9 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4148 6kgx:Y9 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4149 6kgx:Y9 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4150 6kgx:Y9 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4151 6kgx:YA (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4152 6kgx:YA (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4153 6kgx:YA (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4154 6kgx:YA (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4155 6kgx:YB (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4156 6kgx:YB (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4157 6kgx:YB (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4158 6kgx:YB (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4159 6kgx:YD (2.8) BS01 PEB N/A N/A N/A 32076272
    4160 6kgx:YD (2.8) BS02 PEB N/A N/A N/A 32076272
    4161 6kgx:YD (2.8) BS03 PEB N/A N/A N/A 32076272
    4162 6kgx:YD (2.8) BS04 PEB N/A N/A N/A 32076272
    4163 6kgx:YD (2.8) BS05 PEB N/A N/A N/A 32076272
    4164 6kgx:YD (2.8) BS07 PEB N/A N/A N/A 32076272
    4165 6kgx:YD (2.8) BS08 PEB N/A N/A N/A 32076272
    4166 6kgx:YD (2.8) BS10 PEB N/A N/A N/A 32076272
    4167 6kgx:YD (2.8) BS11 PEB N/A N/A N/A 32076272
    4168 6kgx:YE (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4169 6kgx:YE (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4170 6kgx:YE (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4171 6kgx:YF (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4172 6kgx:YF (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4173 6kgx:YF (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4174 6kgx:YF (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4175 6kgx:YG (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4176 6kgx:YG (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4177 6kgx:YG (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4178 6kgx:YG (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4179 6kgx:YI (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4180 6kgx:YI (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4181 6kgx:YI (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4182 6kgx:YJ (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4183 6kgx:YJ (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4184 6kgx:YJ (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4185 6kgx:YJ (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    4186 6kgx:Z1 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4187 6kgx:Z1 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4188 6kgx:Z1 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4189 6kgx:Z2 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4190 6kgx:Z2 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4191 6kgx:Z2 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4192 6kgx:Z2 (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    4193 6kgx:Z4 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    4194 6kgx:Z4 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    4195 6kgx:Z4 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    4196 6kgx:Z6 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4197 6kgx:Z6 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    4198 6kgx:Z6 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    4199 6kgx:Z7 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    4200 6kgx:Z7 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218