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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    3201 6kgx:G8 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3202 6kgx:G9 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3203 6kgx:G9 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3204 6kgx:G9 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3205 6kgx:G9 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    3206 6kgx:GA (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3207 6kgx:GA (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3208 6kgx:GA (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3209 6kgx:GB (2.8) BS01 PEB ? GO:0009507 ... W0RYI4 32076272
    3210 6kgx:GC (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3211 6kgx:GC (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3212 6kgx:GC (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3213 6kgx:GD (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3214 6kgx:GD (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3215 6kgx:GD (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3216 6kgx:GD (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    3217 6kgx:GE (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3218 6kgx:GE (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3219 6kgx:GE (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3220 6kgx:GF (2.8) BS01 PEB ? GO:0009507 ... W0RYI4 32076272
    3221 6kgx:GG (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3222 6kgx:GG (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3223 6kgx:GG (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3224 6kgx:GI (2.8) BS01 PEB ? GO:0009507 ... W0RYI4 32076272
    3225 6kgx:GI (2.8) BS02 PEB ? GO:0009507 ... W0RYI4 32076272
    3226 6kgx:GJ (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3227 6kgx:GJ (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3228 6kgx:GJ (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3229 6kgx:GJ (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    3230 6kgx:H1 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3231 6kgx:H1 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3232 6kgx:H1 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3233 6kgx:H1 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    3234 6kgx:H2 (2.8) BS01 PEB ? GO:0009507 ... W0RZB2 32076272
    3235 6kgx:H3 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3236 6kgx:H3 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3237 6kgx:H3 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3238 6kgx:H3 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    3239 6kgx:H4 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3240 6kgx:H4 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3241 6kgx:H4 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3242 6kgx:H4 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    3243 6kgx:H5 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3244 6kgx:H5 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3245 6kgx:H5 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3246 6kgx:H6 (2.8) BS01 PEB ? GO:0009507 ... W0RZB2 32076272
    3247 6kgx:H7 (2.8) BS01 PEB ? GO:0009507 ... W0RZB2 32076272
    3248 6kgx:H8 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3249 6kgx:H8 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3250 6kgx:H8 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3251 6kgx:H8 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    3252 6kgx:H9 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3253 6kgx:H9 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3254 6kgx:H9 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3255 6kgx:HA (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3256 6kgx:HA (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3257 6kgx:HA (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3258 6kgx:HA (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    3259 6kgx:HB (2.8) BS01 PEB ? GO:0009507 ... W0RZB2 32076272
    3260 6kgx:HC (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3261 6kgx:HC (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3262 6kgx:HC (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3263 6kgx:HD (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3264 6kgx:HD (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3265 6kgx:HD (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3266 6kgx:HD (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    3267 6kgx:HE (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3268 6kgx:HE (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3269 6kgx:HE (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3270 6kgx:HE (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    3271 6kgx:HF (2.8) BS01 PEB ? GO:0009507 ... W0RZB2 32076272
    3272 6kgx:HG (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3273 6kgx:HG (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3274 6kgx:HG (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3275 6kgx:HG (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    3276 6kgx:HI (2.8) BS01 PEB ? GO:0009507 ... W0RZB2 32076272
    3277 6kgx:HJ (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3278 6kgx:HJ (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3279 6kgx:HJ (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3280 6kgx:HJ (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    3281 6kgx:I1 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3282 6kgx:I1 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3283 6kgx:I1 (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    3284 6kgx:I2 (2.8) BS01 PEB ? GO:0009507 ... W0RYI4 32076272
    3285 6kgx:I3 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3286 6kgx:I3 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3287 6kgx:I3 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3288 6kgx:I3 (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    3289 6kgx:I4 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3290 6kgx:I4 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3291 6kgx:I4 (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    3292 6kgx:I5 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3293 6kgx:I5 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3294 6kgx:I5 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3295 6kgx:I6 (2.8) BS01 PEB ? GO:0009507 ... W0RYI4 32076272
    3296 6kgx:I8 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3297 6kgx:I8 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3298 6kgx:I8 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3299 6kgx:I8 (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    3300 6kgx:I9 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3301 6kgx:I9 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3302 6kgx:I9 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3303 6kgx:I9 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    3304 6kgx:IA (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3305 6kgx:IA (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3306 6kgx:IA (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3307 6kgx:IA (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    3308 6kgx:IB (2.8) BS01 PEB ? GO:0009507 ... W0RYI4 32076272
    3309 6kgx:IC (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3310 6kgx:IC (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3311 6kgx:IC (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3312 6kgx:ID (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3313 6kgx:ID (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3314 6kgx:ID (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3315 6kgx:IE (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3316 6kgx:IE (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3317 6kgx:IE (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3318 6kgx:IF (2.8) BS01 PEB ? GO:0009507 ... W0RYI4 32076272
    3319 6kgx:IG (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3320 6kgx:IG (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3321 6kgx:IG (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3322 6kgx:IG (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    3323 6kgx:II (2.8) BS01 PEB ? GO:0009507 ... W0RYI4 32076272
    3324 6kgx:IJ (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3325 6kgx:IJ (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3326 6kgx:IJ (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3327 6kgx:IJ (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    3328 6kgx:J1 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3329 6kgx:J1 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3330 6kgx:J1 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3331 6kgx:J2 (2.8) BS01 PEB ? GO:0009507 ... W0RZB2 32076272
    3332 6kgx:J3 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3333 6kgx:J3 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3334 6kgx:J3 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3335 6kgx:J3 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    3336 6kgx:J4 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3337 6kgx:J4 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3338 6kgx:J4 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3339 6kgx:J5 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3340 6kgx:J5 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3341 6kgx:J5 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3342 6kgx:J6 (2.8) BS01 PEB ? GO:0009507 ... W0RZB2 32076272
    3343 6kgx:J7 (2.8) BS01 PEB ? GO:0009507 ... W0RZB2 32076272
    3344 6kgx:J8 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3345 6kgx:J8 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3346 6kgx:J8 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3347 6kgx:J8 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    3348 6kgx:J9 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3349 6kgx:J9 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3350 6kgx:J9 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3351 6kgx:JA (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3352 6kgx:JA (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3353 6kgx:JA (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3354 6kgx:JA (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    3355 6kgx:JB (2.8) BS01 PEB ? GO:0009507 ... W0RZB2 32076272
    3356 6kgx:JC (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3357 6kgx:JC (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3358 6kgx:JC (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3359 6kgx:JD (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3360 6kgx:JD (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3361 6kgx:JD (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3362 6kgx:JD (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    3363 6kgx:JE (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3364 6kgx:JE (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3365 6kgx:JE (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3366 6kgx:JE (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    3367 6kgx:JF (2.8) BS01 PEB ? GO:0009507 ... W0RZB2 32076272
    3368 6kgx:JG (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3369 6kgx:JG (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3370 6kgx:JG (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3371 6kgx:JG (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    3372 6kgx:JI (2.8) BS01 PEB ? GO:0009507 ... W0RZB2 32076272
    3373 6kgx:JJ (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3374 6kgx:JJ (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3375 6kgx:JJ (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3376 6kgx:K1 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3377 6kgx:K1 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3378 6kgx:K1 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3379 6kgx:K1 (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    3380 6kgx:K1 (2.8) BS05 PEB ? GO:0009507 ... E2IH77 32076272
    3381 6kgx:K3 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3382 6kgx:K3 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3383 6kgx:K3 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3384 6kgx:K3 (2.8) BS05 PEB ? GO:0009507 ... E2IH77 32076272
    3385 6kgx:K4 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3386 6kgx:K4 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3387 6kgx:K4 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3388 6kgx:K4 (2.8) BS04 PEB ? GO:0009507 ... E2IH77 32076272
    3389 6kgx:K5 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3390 6kgx:K5 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3391 6kgx:K5 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3392 6kgx:K6 (2.8) BS01 PEB ? GO:0009507 ... W0RYI4 32076272
    3393 6kgx:K8 (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    3394 6kgx:K8 (2.8) BS02 PEB ? GO:0009507 ... E2IH77 32076272
    3395 6kgx:K8 (2.8) BS03 PEB ? GO:0009507 ... E2IH77 32076272
    3396 6kgx:K9 (2.8) BS01 PEB ? GO:0009507 ... P11393 32076272
    3397 6kgx:K9 (2.8) BS02 PEB ? GO:0009507 ... P11393 32076272
    3398 6kgx:K9 (2.8) BS03 PEB ? GO:0009507 ... P11393 32076272
    3399 6kgx:K9 (2.8) BS04 PEB ? GO:0009507 ... P11393 32076272
    3400 6kgx:KA (2.8) BS01 PEB ? GO:0009507 ... E2IH77 32076272
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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