Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    2201 5y6p:gz (3.5) BS08 PEB N/A N/A N/A 29045394
    2202 5y6p:h2 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2203 5y6p:h2 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2204 5y6p:h2 (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    2205 5y6p:h3 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2206 5y6p:h3 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2207 5y6p:h4 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2208 5y6p:h4 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2209 5y6p:h4 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2210 5y6p:h5 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2211 5y6p:h5 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2212 5y6p:h5 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2213 5y6p:h6 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2214 5y6p:h6 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2215 5y6p:h6 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2216 5y6p:h6 (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    2217 5y6p:h6 (3.5) BS05 PEB N/A GO:0015979 ... N/A 29045394
    2218 5y6p:h7 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2219 5y6p:h7 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2220 5y6p:h8 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2221 5y6p:h8 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2222 5y6p:h9 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2223 5y6p:h9 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2224 5y6p:h9 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2225 5y6p:hA (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2226 5y6p:hA (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2227 5y6p:hB (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2228 5y6p:hB (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2229 5y6p:hC (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2230 5y6p:hC (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2231 5y6p:hD (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2232 5y6p:hD (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2233 5y6p:hD (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    2234 5y6p:hE (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2235 5y6p:hE (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2236 5y6p:hE (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2237 5y6p:hF (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2238 5y6p:hF (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2239 5y6p:hG (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2240 5y6p:hG (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2241 5y6p:hG (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    2242 5y6p:hH (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2243 5y6p:hH (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2244 5y6p:hH (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2245 5y6p:hI (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2246 5y6p:hI (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2247 5y6p:hI (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2248 5y6p:hJ (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2249 5y6p:hJ (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2250 5y6p:hJ (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    2251 5y6p:hK (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2252 5y6p:hK (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2253 5y6p:hL (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2254 5y6p:hL (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2255 5y6p:hM (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2256 5y6p:hM (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2257 5y6p:hM (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2258 5y6p:hN (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2259 5y6p:hN (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2260 5y6p:hO (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2261 5y6p:hO (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2262 5y6p:hP (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2263 5y6p:hP (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2264 5y6p:hQ (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2265 5y6p:hQ (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2266 5y6p:hQ (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2267 5y6p:hR (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2268 5y6p:hR (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2269 5y6p:hR (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2270 5y6p:hS (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2271 5y6p:hS (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2272 5y6p:hS (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2273 5y6p:hT (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2274 5y6p:hT (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2275 5y6p:hT (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    2276 5y6p:hU (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2277 5y6p:hU (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2278 5y6p:hU (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2279 5y6p:hV (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2280 5y6p:hV (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2281 5y6p:hV (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    2282 5y6p:hW (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2283 5y6p:hW (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2284 5y6p:hX (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2285 5y6p:hX (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2286 5y6p:hY (3.5) BS01 PEB N/A N/A N/A 29045394
    2287 5y6p:hY (3.5) BS02 PEB N/A N/A N/A 29045394
    2288 5y6p:hY (3.5) BS03 PEB N/A N/A N/A 29045394
    2289 5y6p:hY (3.5) BS04 PEB N/A N/A N/A 29045394
    2290 5y6p:hZ (3.5) BS01 PEB N/A N/A N/A 29045394
    2291 5y6p:hZ (3.5) BS02 PEB N/A N/A N/A 29045394
    2292 5y6p:hZ (3.5) BS03 PEB N/A N/A N/A 29045394
    2293 5y6p:hZ (3.5) BS04 PEB N/A N/A N/A 29045394
    2294 5y6p:hZ (3.5) BS05 PEB N/A N/A N/A 29045394
    2295 5y6p:i2 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2296 5y6p:i2 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2297 5y6p:i2 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2298 5y6p:i3 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2299 5y6p:i3 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2300 5y6p:i3 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2301 5y6p:i4 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2302 5y6p:i5 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2303 5y6p:i5 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2304 5y6p:i6 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2305 5y6p:i6 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2306 5y6p:i6 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2307 5y6p:i6 (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    2308 5y6p:i7 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2309 5y6p:i7 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2310 5y6p:i7 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2311 5y6p:i8 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2312 5y6p:i8 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2313 5y6p:i9 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2314 5y6p:i9 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2315 5y6p:iA (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2316 5y6p:iA (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2317 5y6p:iB (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2318 5y6p:iB (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2319 5y6p:iC (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2320 5y6p:iC (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2321 5y6p:iD (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2322 5y6p:iD (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2323 5y6p:iE (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2324 5y6p:iE (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2325 5y6p:iF (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2326 5y6p:iF (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2327 5y6p:iG (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2328 5y6p:iG (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2329 5y6p:iH (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2330 5y6p:iH (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2331 5y6p:j2 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2332 5y6p:j2 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2333 5y6p:j2 (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    2334 5y6p:j3 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2335 5y6p:j3 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2336 5y6p:j3 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2337 5y6p:j4 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2338 5y6p:j4 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2339 5y6p:j4 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2340 5y6p:j5 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2341 5y6p:j5 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2342 5y6p:j5 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2343 5y6p:j6 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2344 5y6p:j6 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2345 5y6p:j7 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2346 5y6p:j7 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2347 5y6p:j8 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2348 5y6p:j8 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2349 5y6p:j9 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2350 5y6p:j9 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2351 5y6p:j9 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2352 5y6p:jI (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2353 5y6p:jI (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2354 5y6p:jJ (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2355 5y6p:jJ (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2356 5y6p:jK (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2357 5y6p:jK (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2358 5y6p:jL (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2359 5y6p:jL (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2360 5y6p:jM (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2361 5y6p:jM (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2362 5y6p:jN (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2363 5y6p:jN (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2364 5y6p:jO (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2365 5y6p:jO (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2366 5y6p:jP (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2367 5y6p:jP (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2368 5y6p:k2 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2369 5y6p:k2 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2370 5y6p:k3 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2371 5y6p:k3 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2372 5y6p:k3 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2373 5y6p:k4 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2374 5y6p:k5 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2375 5y6p:k6 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2376 5y6p:k6 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2377 5y6p:k6 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2378 5y6p:k7 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2379 5y6p:k7 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2380 5y6p:k7 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2381 5y6p:k8 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2382 5y6p:k8 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2383 5y6p:k8 (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2384 5y6p:k8 (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    2385 5y6p:k9 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2386 5y6p:k9 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2387 5y6p:kQ (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2388 5y6p:kQ (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2389 5y6p:kR (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2390 5y6p:kR (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2391 5y6p:kS (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2392 5y6p:kS (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2393 5y6p:kS (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2394 5y6p:kT (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2395 5y6p:kT (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2396 5y6p:kT (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    2397 5y6p:kU (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2398 5y6p:kU (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    2399 5y6p:kV (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    2400 5y6p:kV (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218