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BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1801 5y6p:du (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1802 5y6p:du (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1803 5y6p:du (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1804 5y6p:dv (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1805 5y6p:dv (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1806 5y6p:dv (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1807 5y6p:dw (3.5) BS01 PEB N/A N/A N/A 29045394
    1808 5y6p:dw (3.5) BS02 PEB N/A N/A N/A 29045394
    1809 5y6p:dw (3.5) BS03 PEB N/A N/A N/A 29045394
    1810 5y6p:dw (3.5) BS04 PEB N/A N/A N/A 29045394
    1811 5y6p:dw (3.5) BS05 PEB N/A N/A N/A 29045394
    1812 5y6p:dw (3.5) BS06 PEB N/A N/A N/A 29045394
    1813 5y6p:dw (3.5) BS07 PEB N/A N/A N/A 29045394
    1814 5y6p:dw (3.5) BS08 PEB N/A N/A N/A 29045394
    1815 5y6p:dx (3.5) BS01 PEB N/A N/A N/A 29045394
    1816 5y6p:dx (3.5) BS02 PEB N/A N/A N/A 29045394
    1817 5y6p:dx (3.5) BS03 PEB N/A N/A N/A 29045394
    1818 5y6p:dx (3.5) BS04 PEB N/A N/A N/A 29045394
    1819 5y6p:dx (3.5) BS05 PEB N/A N/A N/A 29045394
    1820 5y6p:dx (3.5) BS06 PEB N/A N/A N/A 29045394
    1821 5y6p:dx (3.5) BS07 PEB N/A N/A N/A 29045394
    1822 5y6p:dx (3.5) BS08 PEB N/A N/A N/A 29045394
    1823 5y6p:dx (3.5) BS09 PEB N/A N/A N/A 29045394
    1824 5y6p:dy (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1825 5y6p:dy (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1826 5y6p:dy (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1827 5y6p:dz (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1828 5y6p:dz (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1829 5y6p:dz (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1830 5y6p:dz (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1831 5y6p:dz (3.5) BS05 PEB N/A GO:0015979 ... N/A 29045394
    1832 5y6p:e2 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1833 5y6p:e2 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1834 5y6p:e3 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1835 5y6p:e3 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1836 5y6p:e4 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1837 5y6p:e4 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1838 5y6p:e5 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1839 5y6p:e5 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1840 5y6p:e6 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1841 5y6p:e6 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1842 5y6p:e6 (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1843 5y6p:e7 (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1844 5y6p:e7 (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1845 5y6p:e7 (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1846 5y6p:e8 (3.5) BS01 PEB N/A N/A N/A 29045394
    1847 5y6p:e8 (3.5) BS02 PEB N/A N/A N/A 29045394
    1848 5y6p:e8 (3.5) BS03 PEB N/A N/A N/A 29045394
    1849 5y6p:e8 (3.5) BS04 PEB N/A N/A N/A 29045394
    1850 5y6p:e8 (3.5) BS05 PEB N/A N/A N/A 29045394
    1851 5y6p:e8 (3.5) BS06 PEB N/A N/A N/A 29045394
    1852 5y6p:e9 (3.5) BS01 PEB N/A N/A N/A 29045394
    1853 5y6p:e9 (3.5) BS02 PEB N/A N/A N/A 29045394
    1854 5y6p:e9 (3.5) BS03 PEB N/A N/A N/A 29045394
    1855 5y6p:e9 (3.5) BS04 PEB N/A N/A N/A 29045394
    1856 5y6p:e9 (3.5) BS05 PEB N/A N/A N/A 29045394
    1857 5y6p:e9 (3.5) BS06 PEB N/A N/A N/A 29045394
    1858 5y6p:e9 (3.5) BS07 PEB N/A N/A N/A 29045394
    1859 5y6p:eA (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1860 5y6p:eA (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1861 5y6p:eB (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1862 5y6p:eB (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1863 5y6p:eC (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1864 5y6p:eC (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1865 5y6p:eD (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1866 5y6p:eD (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1867 5y6p:eE (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1868 5y6p:eE (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1869 5y6p:eE (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1870 5y6p:eF (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1871 5y6p:eF (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1872 5y6p:eG (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1873 5y6p:eG (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1874 5y6p:eH (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1875 5y6p:eH (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1876 5y6p:eI (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1877 5y6p:eI (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1878 5y6p:eJ (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1879 5y6p:eJ (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1880 5y6p:eK (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1881 5y6p:eK (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1882 5y6p:eK (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1883 5y6p:eL (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1884 5y6p:eL (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1885 5y6p:eM (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1886 5y6p:eM (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1887 5y6p:eM (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1888 5y6p:eM (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1889 5y6p:eM (3.5) BS05 PEB N/A GO:0015979 ... N/A 29045394
    1890 5y6p:eN (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1891 5y6p:eN (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1892 5y6p:eN (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1893 5y6p:eO (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1894 5y6p:eO (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1895 5y6p:eO (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1896 5y6p:eP (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1897 5y6p:eP (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1898 5y6p:eP (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1899 5y6p:eQ (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1900 5y6p:eQ (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1901 5y6p:eQ (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1902 5y6p:eR (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1903 5y6p:eR (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1904 5y6p:eS (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1905 5y6p:eS (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1906 5y6p:eT (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1907 5y6p:eT (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1908 5y6p:eU (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1909 5y6p:eU (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1910 5y6p:eU (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1911 5y6p:eU (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1912 5y6p:eV (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1913 5y6p:eV (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1914 5y6p:eV (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1915 5y6p:eW (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1916 5y6p:eW (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1917 5y6p:eX (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1918 5y6p:eX (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1919 5y6p:eY (3.5) BS01 PEB N/A N/A N/A 29045394
    1920 5y6p:eY (3.5) BS02 PEB N/A N/A N/A 29045394
    1921 5y6p:eY (3.5) BS03 PEB N/A N/A N/A 29045394
    1922 5y6p:eY (3.5) BS04 PEB N/A N/A N/A 29045394
    1923 5y6p:eZ (3.5) BS01 PEB N/A N/A N/A 29045394
    1924 5y6p:eZ (3.5) BS02 PEB N/A N/A N/A 29045394
    1925 5y6p:eZ (3.5) BS03 PEB N/A N/A N/A 29045394
    1926 5y6p:eZ (3.5) BS04 PEB N/A N/A N/A 29045394
    1927 5y6p:eZ (3.5) BS05 PEB N/A N/A N/A 29045394
    1928 5y6p:ea (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1929 5y6p:ea (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1930 5y6p:eb (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1931 5y6p:eb (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1932 5y6p:ec (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1933 5y6p:ec (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1934 5y6p:ed (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1935 5y6p:ed (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1936 5y6p:ed (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1937 5y6p:ee (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1938 5y6p:ee (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1939 5y6p:ee (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1940 5y6p:ef (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1941 5y6p:ef (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1942 5y6p:ef (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1943 5y6p:eg (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1944 5y6p:eg (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1945 5y6p:eg (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1946 5y6p:eh (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1947 5y6p:eh (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1948 5y6p:ei (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1949 5y6p:ei (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1950 5y6p:ei (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1951 5y6p:ej (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1952 5y6p:ej (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1953 5y6p:ej (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1954 5y6p:ek (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1955 5y6p:ek (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1956 5y6p:ek (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1957 5y6p:ek (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1958 5y6p:el (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1959 5y6p:el (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1960 5y6p:em (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1961 5y6p:em (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1962 5y6p:em (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1963 5y6p:en (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1964 5y6p:en (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1965 5y6p:en (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1966 5y6p:en (3.5) BS05 PEB N/A GO:0015979 ... N/A 29045394
    1967 5y6p:eo (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1968 5y6p:eo (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1969 5y6p:eo (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1970 5y6p:ep (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1971 5y6p:ep (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1972 5y6p:ep (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1973 5y6p:eq (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1974 5y6p:eq (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1975 5y6p:er (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1976 5y6p:er (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1977 5y6p:er (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1978 5y6p:es (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1979 5y6p:es (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1980 5y6p:es (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1981 5y6p:et (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1982 5y6p:et (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1983 5y6p:eu (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1984 5y6p:eu (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1985 5y6p:eu (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1986 5y6p:ev (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1987 5y6p:ev (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1988 5y6p:ew (3.5) BS01 PEB N/A GO:0015979 ... N/A 29045394
    1989 5y6p:ew (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1990 5y6p:ew (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1991 5y6p:ew (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1992 5y6p:ex (3.5) BS02 PEB N/A GO:0015979 ... N/A 29045394
    1993 5y6p:ex (3.5) BS03 PEB N/A GO:0015979 ... N/A 29045394
    1994 5y6p:ex (3.5) BS04 PEB N/A GO:0015979 ... N/A 29045394
    1995 5y6p:ex (3.5) BS05 PEB N/A GO:0015979 ... N/A 29045394
    1996 5y6p:ex (3.5) BS06 PEB N/A GO:0015979 ... N/A 29045394
    1997 5y6p:ey (3.5) BS01 PEB N/A N/A N/A 29045394
    1998 5y6p:ey (3.5) BS02 PEB N/A N/A N/A 29045394
    1999 5y6p:ey (3.5) BS03 PEB N/A N/A N/A 29045394
    2000 5y6p:ey (3.5) BS04 PEB N/A N/A N/A 29045394
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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