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BioLiP
Download all results in tab-seperated text for 663 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    601 7qzu:H (1.964) BS02 OXL 2.7.1.40 GO:0000287 ... P30613 35290845
    602 7r6y:A (2.25) BS01 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P11974 35163274
    603 7r6y:B (2.25) BS01 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P11974 35163274
    604 7r6y:C (2.25) BS01 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P11974 35163274
    605 7r6y:D (2.25) BS01 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P11974 35163274
    606 7z53:P (2.28) BS04 OXL 1.11.2.2 GO:0004601 ... P05164 36150500
    607 8g2e:A (1.838) BS02 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 37242488
    608 8hmq:A (2.5) BS01 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    609 8hmq:B (2.5) BS01 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    610 8hmq:C (2.5) BS01 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    611 8hmq:D (2.5) BS01 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    612 8hmr:A (2.6) BS01 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    613 8hmr:B (2.6) BS02 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    614 8hmr:C (2.6) BS01 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    615 8hmr:D (2.6) BS02 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    616 8hms:A (2.1) BS02 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    617 8hms:B (2.1) BS01 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    618 8hms:C (2.1) BS01 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    619 8hms:D (2.1) BS01 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    620 8hmu:A (2.5) BS02 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    621 8hmu:B (2.5) BS02 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    622 8hmu:B (2.5) BS03 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    623 8hmu:C (2.5) BS02 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    624 8hmu:D (2.5) BS02 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 N/A
    625 8hpk:A (3.0) BS01 OXL ? GO:0005886 ... Q51330 37012268
    626 8iat:A (1.8) BS01 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    627 8iat:A (1.8) BS02 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    628 8iat:B (1.8) BS01 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    629 8iat:B (1.8) BS02 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    630 8iat:C (1.8) BS01 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    631 8iat:C (1.8) BS02 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    632 8iat:D (1.8) BS01 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    633 8iat:D (1.8) BS02 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    634 8iau:A (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    635 8iau:B (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    636 8iau:C (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    637 8iau:D (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    638 8iau:F (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    639 8iau:G (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    640 8iau:H (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    641 8ih7:A (2.48) BS02 OXL 4.1.3.39 GO:0003824 ... Q9KWS0 N/A
    642 8ih7:C (2.48) BS02 OXL 4.1.3.39 GO:0003824 ... Q9KWS0 N/A
    643 8rw3:B (1.9) BS02 OXL 2.4.1.161 GO:0003824 ... B3PEE6 38623783
    644 8sky:A (2.4) BS01 OXL ? GO:0003824 ... O06724 38047707
    645 8sky:B (2.4) BS01 OXL ? GO:0003824 ... O06724 38047707
    646 8xw6:A (1.99) BS02 OXL N/A GO:0004743 ... Q8DQ84 39009072
    647 8xw6:B (1.99) BS02 OXL N/A GO:0004743 ... Q8DQ84 39009072
    648 8xw7:A (2.1) BS03 OXL N/A GO:0004743 ... Q8DQ84 39009072
    649 8xw7:B (2.1) BS03 OXL N/A GO:0004743 ... Q8DQ84 39009072
    650 8xw8:A (2.0) BS04 OXL N/A GO:0004743 ... Q8DQ84 39009072
    651 8xw8:B (2.0) BS04 OXL N/A GO:0004743 ... Q8DQ84 39009072
    652 8xw8:C (2.0) BS04 OXL N/A GO:0004743 ... Q8DQ84 39009072
    653 8xw8:D (2.0) BS04 OXL N/A GO:0004743 ... Q8DQ84 39009072
    654 8xw9:A (1.75) BS02 OXL N/A GO:0004743 ... Q8DQ84 39009072
    655 8xw9:B (1.75) BS02 OXL N/A GO:0004743 ... Q8DQ84 39009072
    656 8zly:A (1.89) BS04 OXL N/A GO:0004743 ... Q8DQ84 39009072
    657 8zly:B (1.89) BS04 OXL N/A GO:0004743 ... Q8DQ84 39009072
    658 8zly:C (1.89) BS04 OXL N/A GO:0004743 ... Q8DQ84 39009072
    659 8zly:D (1.89) BS04 OXL N/A GO:0004743 ... Q8DQ84 39009072
    660 8zly:E (1.89) BS04 OXL N/A GO:0004743 ... Q8DQ84 39009072
    661 8zly:F (1.89) BS04 OXL N/A GO:0004743 ... Q8DQ84 39009072
    662 8zly:G (1.89) BS04 OXL N/A GO:0004743 ... Q8DQ84 39009072
    663 8zly:H (1.89) BS03 OXL N/A GO:0004743 ... Q8DQ84 39009072
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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