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BioLiP
Download all results in tab-seperated text for 6381 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    5201 7r3a:C (2.53) BS02 NAD 3.13.1.9 GO:0004013 ... Q6LYR8 38548921
    5202 7r3a:D (2.53) BS02 NAD 3.13.1.9 GO:0004013 ... Q6LYR8 38548921
    5203 7r3a:E (2.53) BS02 NAD 3.13.1.9 GO:0004013 ... Q6LYR8 38548921
    5204 7r3a:F (2.53) BS02 NAD 3.13.1.9 GO:0004013 ... Q6LYR8 38548921
    5205 7r3a:G (2.53) BS02 NAD 3.13.1.9 GO:0004013 ... Q6LYR8 38548921
    5206 7r3a:H (2.53) BS02 NAD 3.13.1.9 GO:0004013 ... Q6LYR8 38548921
    5207 7rad:A (2.3) BS01 NAD 1.2.1.3 GO:0004029 ... P30837 N/A
    5208 7rad:B (2.3) BS01 NAD 1.2.1.3 GO:0004029 ... P30837 N/A
    5209 7rer:A (2.6) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5210 7rer:B (2.6) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5211 7rer:C (2.6) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5212 7rer:D (2.6) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5213 7rer:E (2.6) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5214 7rer:F (2.6) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5215 7rer:G (2.6) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5216 7rer:H (2.6) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5217 7res:A (3.05) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5218 7res:B (3.05) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5219 7res:C (3.05) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5220 7res:D (3.05) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5221 7res:E (3.05) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5222 7res:F (3.05) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5223 7res:G (3.05) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5224 7res:H (3.05) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5225 7rfi:A (2.6) BS04 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5226 7rfi:A (2.6) BS05 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5227 7rfi:B (2.6) BS01 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5228 7rfi:B (2.6) BS05 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5229 7rfi:C (2.6) BS01 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5230 7rfi:C (2.6) BS05 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5231 7rfi:D (2.6) BS01 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5232 7rfi:D (2.6) BS05 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5233 7rfi:E (2.6) BS04 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5234 7rfi:E (2.6) BS05 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5235 7rfi:F (2.6) BS04 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5236 7rfi:G (2.6) BS04 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5237 7rfi:H (2.6) BS01 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5238 7rfi:H (2.6) BS05 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5239 7rgd:A (3.0) BS05 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5240 7rgd:B (3.0) BS05 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5241 7rgd:C (3.0) BS05 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5242 7rgd:D (3.0) BS05 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5243 7rgd:E (3.0) BS05 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5244 7rgd:F (3.0) BS05 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5245 7rgd:G (3.0) BS05 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5246 7rgd:H (3.0) BS05 NAD 1.1.1.205 GO:0000166 ... Q5H9Q6 35013599
    5247 7rgi:A (3.6) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5248 7rgi:A (3.6) BS03 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5249 7rgi:B (3.6) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5250 7rgi:B (3.6) BS03 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5251 7rgi:C (3.6) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5252 7rgi:C (3.6) BS03 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5253 7rgi:D (3.6) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5254 7rgi:E (3.6) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5255 7rgi:E (3.6) BS03 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5256 7rgi:F (3.6) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5257 7rgi:G (3.6) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5258 7rgi:G (3.6) BS03 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5259 7rgi:H (3.6) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5260 7rgi:H (3.6) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5261 7rgl:A (2.4) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5262 7rgl:B (2.4) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5263 7rgl:C (2.4) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5264 7rgl:D (2.4) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5265 7rgl:E (2.4) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5266 7rgl:F (2.4) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5267 7rgl:G (2.4) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5268 7rgl:H (2.4) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5269 7rgm:A (2.8) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5270 7rgm:B (2.8) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5271 7rgm:C (2.8) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5272 7rgm:D (2.8) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5273 7rgm:E (2.8) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5274 7rgm:F (2.8) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5275 7rgm:G (2.8) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5276 7rgm:H (2.8) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5277 7rgq:A (3.9) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5278 7rgq:B (3.9) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5279 7rgq:B (3.9) BS03 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5280 7rgq:C (3.9) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5281 7rgq:C (3.9) BS03 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5282 7rgq:D (3.9) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5283 7rgq:D (3.9) BS03 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5284 7rgq:E (3.9) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5285 7rgq:E (3.9) BS06 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5286 7rgq:F (3.9) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5287 7rgq:F (3.9) BS03 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5288 7rgq:G (3.9) BS01 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5289 7rgq:G (3.9) BS03 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5290 7rgq:H (3.9) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 35013599
    5291 7s2z:A (2.35) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0007165 ... V9M398 N/A
    5292 7s2z:B (2.35) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0007165 ... V9M398 N/A
    5293 7s2z:C (2.35) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0007165 ... V9M398 N/A
    5294 7s2z:D (2.35) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0007165 ... V9M398 N/A
    5295 7sky:A (1.37) BS01 NAD 2.4.2.- GO:0003950 ... P04977 35378130
    5296 7sky:B (1.37) BS01 NAD 2.4.2.- GO:0003950 ... P04977 35378130
    5297 7sky:C (1.37) BS01 NAD 2.4.2.- GO:0003950 ... P04977 35378130
    5298 7sky:D (1.37) BS01 NAD 2.4.2.- GO:0003950 ... P04977 35378130
    5299 7sss:E (2.4) BS02 NAD 1.14.99.60 GO:0004497 ... Q99807 36306796
    5300 7sss:F (2.4) BS02 NAD 1.14.99.60 GO:0004497 ... Q99807 36306796
    5301 7sss:G (2.4) BS01 NAD 1.14.99.60 GO:0004497 ... Q99807 36306796
    5302 7sss:H (2.4) BS01 NAD 1.14.99.60 GO:0004497 ... Q99807 36306796
    5303 7svq:A (1.75) BS01 NAD ? GO:0000166 ... Q6BDJ2 35765894
    5304 7svq:B (1.75) BS01 NAD ? GO:0000166 ... Q6BDJ2 35765894
    5305 7t30:B (3.0) BS01 NAD ? GO:0008137 ... I4BYB5 35213221
    5306 7t30:G (3.0) BS01 NAD ? GO:0008137 ... I4BYB5 35213221
    5307 7u0m:A (1.45) BS01 NAD 1.3.1.9 GO:0000166 ... B1MC30 36107992
    5308 7u0m:B (1.45) BS01 NAD 1.3.1.9 GO:0000166 ... B1MC30 36107992
    5309 7u0o:A (2.05) BS01 NAD 1.3.1.9 GO:0000166 ... A0A0N9XSE6 36920188
    5310 7u0o:B (2.05) BS01 NAD 1.3.1.9 GO:0000166 ... A0A0N9XSE6 36920188
    5311 7u5m:A (2.28) BS01 NAD 1.2.1.12
    2.6.99.-
    GO:0000226 ... P10096 36577381
    5312 7u5m:B (2.28) BS01 NAD 1.2.1.12
    2.6.99.-
    GO:0000226 ... P10096 36577381
    5313 7u5m:C (2.28) BS01 NAD 1.2.1.12
    2.6.99.-
    GO:0000226 ... P10096 36577381
    5314 7u5m:D (2.28) BS01 NAD 1.2.1.12
    2.6.99.-
    GO:0000226 ... P10096 36577381
    5315 7u6z:A (1.30002) BS01 NAD 2.4.2.- GO:0003950 ... P04977 35378130
    5316 7u6z:B (1.30002) BS01 NAD 2.4.2.- GO:0003950 ... P04977 35378130
    5317 7um8:A (1.7) BS01 NAD 1.3.1.9 GO:0004318 ... P0AEK4 36188352
    5318 7um8:B (1.7) BS01 NAD 1.3.1.9 GO:0004318 ... P0AEK4 36188352
    5319 7um9:A (1.8) BS02 NAD 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36
    GO:0000166 ... P00352 35884498
    5320 7umw:A (1.54) BS01 NAD 1.3.1.9 GO:0004318 ... P0AEK4 36188352
    5321 7umw:B (1.54) BS01 NAD 1.3.1.9 GO:0004318 ... P0AEK4 36188352
    5322 7umx:A (2.39) BS02 NAD 1.3.1.9 GO:0000166 ... D0CAD5 36188352
    5323 7umx:B (2.39) BS02 NAD 1.3.1.9 GO:0000166 ... D0CAD5 36188352
    5324 7umx:C (2.39) BS01 NAD 1.3.1.9 GO:0000166 ... D0CAD5 36188352
    5325 7umx:D (2.39) BS02 NAD 1.3.1.9 GO:0000166 ... D0CAD5 36188352
    5326 7umx:E (2.39) BS01 NAD 1.3.1.9 GO:0000166 ... D0CAD5 36188352
    5327 7umx:F (2.39) BS02 NAD 1.3.1.9 GO:0000166 ... D0CAD5 36188352
    5328 7umy:A (2.74) BS01 NAD 1.3.1.9 GO:0000166 ... D0CAD5 36188352
    5329 7umy:B (2.74) BS02 NAD 1.3.1.9 GO:0000166 ... D0CAD5 36188352
    5330 7umy:C (2.74) BS02 NAD 1.3.1.9 GO:0000166 ... D0CAD5 36188352
    5331 7umy:D (2.74) BS01 NAD 1.3.1.9 GO:0000166 ... D0CAD5 36188352
    5332 7umy:E (2.74) BS02 NAD 1.3.1.9 GO:0000166 ... D0CAD5 36188352
    5333 7umy:F (2.74) BS02 NAD 1.3.1.9 GO:0000166 ... D0CAD5 36188352
    5334 7us5:A (2.1) BS01 NAD ? GO:0000166 ... Q5M6Q7 35715226
    5335 7us5:B (2.1) BS01 NAD ? GO:0000166 ... Q5M6Q7 35715226
    5336 7us5:C (2.1) BS01 NAD ? GO:0000166 ... Q5M6Q7 35715226
    5337 7us5:D (2.1) BS01 NAD ? GO:0000166 ... Q5M6Q7 35715226
    5338 7v1q:A (1.58) BS01 NAD ? GO:0000166 ... U2RWV7 34549865
    5339 7v1q:B (1.58) BS01 NAD ? GO:0000166 ... U2RWV7 34549865
    5340 7v1q:C (1.58) BS01 NAD ? GO:0000166 ... U2RWV7 34549865
    5341 7v1q:D (1.58) BS01 NAD ? GO:0000166 ... U2RWV7 34549865
    5342 7v1q:E (1.58) BS01 NAD ? GO:0000166 ... U2RWV7 34549865
    5343 7v1q:F (1.58) BS01 NAD ? GO:0000166 ... U2RWV7 34549865
    5344 7v1q:G (1.58) BS01 NAD ? GO:0000166 ... U2RWV7 34549865
    5345 7v1q:H (1.58) BS01 NAD ? GO:0000166 ... U2RWV7 34549865
    5346 7v1r:A (2.81) BS01 NAD ? GO:0000166 ... U2RWV7 34549865
    5347 7v1r:B (2.81) BS01 NAD ? GO:0000166 ... U2RWV7 34549865
    5348 7v1r:C (2.81) BS01 NAD ? GO:0000166 ... U2RWV7 34549865
    5349 7v1r:D (2.81) BS01 NAD ? GO:0000166 ... U2RWV7 34549865
    5350 7v1r:E (2.81) BS01 NAD ? GO:0000166 ... U2RWV7 34549865
    5351 7v1r:F (2.81) BS01 NAD ? GO:0000166 ... U2RWV7 34549865
    5352 7v1r:G (2.81) BS01 NAD ? GO:0000166 ... U2RWV7 34549865
    5353 7v1r:H (2.81) BS01 NAD ? GO:0000166 ... U2RWV7 34549865
    5354 7vb3:A (1.48) BS01 NAD 4.1.2.46 GO:0005829 ... P93243 35101448
    5355 7vb3:B (1.48) BS01 NAD 4.1.2.46 GO:0005829 ... P93243 35101448
    5356 7vb3:C (1.48) BS01 NAD 4.1.2.46 GO:0005829 ... P93243 35101448
    5357 7vb3:D (1.48) BS01 NAD 4.1.2.46 GO:0005829 ... P93243 35101448
    5358 7vb5:A (1.58) BS01 NAD 4.1.2.46 GO:0005829 ... P93243 35101448
    5359 7vb5:B (1.58) BS01 NAD 4.1.2.46 GO:0005829 ... P93243 35101448
    5360 7vb5:C (1.58) BS01 NAD 4.1.2.46 GO:0005829 ... P93243 35101448
    5361 7vb5:D (1.58) BS01 NAD 4.1.2.46 GO:0005829 ... P93243 35101448
    5362 7vb6:A (1.74) BS01 NAD 4.1.2.46 GO:0005829 ... P93243 35101448
    5363 7vb6:B (1.74) BS01 NAD 4.1.2.46 GO:0005829 ... P93243 35101448
    5364 7vb6:C (1.74) BS01 NAD 4.1.2.46 GO:0005829 ... P93243 35101448
    5365 7vb6:D (1.74) BS01 NAD 4.1.2.46 GO:0005829 ... P93243 35101448
    5366 7vb8:A (1.72) BS02 NAD ? GO:0000166 ... A0A1B6PFV1 37308495
    5367 7vb8:B (1.72) BS02 NAD ? GO:0000166 ... A0A1B6PFV1 37308495
    5368 7war:A (2.101) BS02 NAD ? GO:0000166 ... A0A1B6PFV1 37308495
    5369 7war:B (2.101) BS02 NAD ? GO:0000166 ... A0A1B6PFV1 37308495
    5370 7was:A (2.401) BS02 NAD ? GO:0000166 ... A0A1B6PFV1 37308495
    5371 7was:B (2.401) BS02 NAD ? GO:0000166 ... A0A1B6PFV1 37308495
    5372 7wb3:A (2.401) BS03 NAD ? GO:0003677 ... Q9WY16 35163512
    5373 7wb3:A (2.401) BS04 NAD ? GO:0003677 ... Q9WY16 35163512
    5374 7wb3:B (2.401) BS03 NAD ? GO:0003677 ... Q9WY16 35163512
    5375 7wbc:A (2.0) BS01 NAD ? GO:0000166 ... A0A098BU97 N/A
    5376 7wbc:B (2.0) BS01 NAD ? GO:0000166 ... A0A098BU97 N/A
    5377 7www:A (1.88) BS01 NAD ? GO:0000166 ... A0A1V3Y2M1 N/A
    5378 7wwx:A (1.36) BS01 NAD N/A GO:0016491 ... N/A 35279441
    5379 7wwx:B (1.36) BS01 NAD N/A GO:0016491 ... N/A 35279441
    5380 7x1l:A (2.28) BS01 NAD 1.1.1.37 GO:0000166 ... A0A143T1U9 36208218
    5381 7x1l:B (2.28) BS01 NAD 1.1.1.37 GO:0000166 ... A0A143T1U9 36208218
    5382 7x1l:C (2.28) BS01 NAD 1.1.1.37 GO:0000166 ... A0A143T1U9 36208218
    5383 7x1l:D (2.28) BS01 NAD 1.1.1.37 GO:0000166 ... A0A143T1U9 36208218
    5384 7x1l:E (2.28) BS01 NAD 1.1.1.37 GO:0000166 ... A0A143T1U9 36208218
    5385 7x1l:F (2.28) BS01 NAD 1.1.1.37 GO:0000166 ... A0A143T1U9 36208218
    5386 7x1x:A (2.77) BS01 NAD ? GO:0000166 ... A0A076PYH9 35667443
    5387 7x1x:B (2.77) BS01 NAD ? GO:0000166 ... A0A076PYH9 35667443
    5388 7x2y:A (2.48) BS02 NAD ? GO:0000166 ... A0A076PYH9 35667443
    5389 7x2y:B (2.48) BS02 NAD ? GO:0000166 ... A0A076PYH9 35667443
    5390 7x3z:A (2.25) BS01 NAD 1.1.1.51
    1.1.1.62
    GO:0003824 ... P14061 36634828
    5391 7x3z:B (2.25) BS01 NAD 1.1.1.51
    1.1.1.62
    GO:0003824 ... P14061 36634828
    5392 7xde:A (2.72) BS01 NAD 1.1.1.38 GO:0004470 ... P23368 N/A
    5393 7xde:B (2.72) BS01 NAD 1.1.1.38 GO:0004470 ... P23368 N/A
    5394 7xde:C (2.72) BS01 NAD 1.1.1.38 GO:0004470 ... P23368 N/A
    5395 7xde:D (2.72) BS01 NAD 1.1.1.38 GO:0004470 ... P23368 N/A
    5396 7xdf:A (2.72) BS01 NAD 1.1.1.38 GO:0004470 ... P23368 N/A
    5397 7xdf:A (2.72) BS02 NAD 1.1.1.38 GO:0004470 ... P23368 N/A
    5398 7xdf:B (2.72) BS02 NAD 1.1.1.38 GO:0004470 ... P23368 N/A
    5399 7xdf:B (2.72) BS03 NAD 1.1.1.38 GO:0004470 ... P23368 N/A
    5400 7xdf:C (2.72) BS01 NAD 1.1.1.38 GO:0004470 ... P23368 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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