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BioLiP
Download all results in tab-seperated text for 17 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 2blf:A (1.8) BS01 MSS ? GO:0006790 ... Q9LA16 15863498
    2 2bpb:A (1.9) BS01 MSS ? GO:0006790 ... Q9LA16 15863498
    3 2c9x:A (1.8) BS01 MSS ? GO:0006790 ... Q9LA16 16893171
    4 2ca3:A (2.0) BS01 MSS ? GO:0006790 ... Q9LA16 19004819
    5 2ca4:A (2.1) BS01 MSS ? GO:0006790 ... Q9LA16 19004819
    6 4pw3:A (2.35) BS01 MSS 1.8.3.1 GO:0006790 ... Q92M24 26687009
    7 4pw3:B (2.35) BS01 MSS 1.8.3.1 GO:0006790 ... Q92M24 26687009
    8 4pw3:C (2.35) BS01 MSS 1.8.3.1 GO:0006790 ... Q92M24 26687009
    9 4pw3:D (2.35) BS01 MSS 1.8.3.1 GO:0006790 ... Q92M24 26687009
    10 4pw9:A (2.49) BS01 MSS 1.8.3.1 GO:0006790 ... Q92M24 26687009
    11 5k3x:A (1.6) BS01 MSS 1.8.3.1 GO:0006790 ... Q92M24 28986298
    12 5k3x:B (1.6) BS01 MSS 1.8.3.1 GO:0006790 ... Q92M24 28986298
    13 5wa0:A (2.1) BS01 MSS 1.8.3.1 GO:0006790 ... Q92M24 28986298
    14 5wa0:B (2.1) BS01 MSS 1.8.3.1 GO:0006790 ... Q92M24 28986298
    15 5wa0:C (2.1) BS01 MSS 1.8.3.1 GO:0006790 ... Q92M24 28986298
    16 5wa0:D (2.1) BS01 MSS 1.8.3.1 GO:0006790 ... Q92M24 28986298
    17 6y0k:AAA (1.7) BS01 MSS ? GO:0006790 ... Q5SIP4 32716419
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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