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BioLiP
Download all results in tab-seperated text for 12805 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    11801 8awv:A (2.08) BS02 MN 5.3.1.5 GO:0000287 ... P24300 37185266
    11802 8awx:A (1.96) BS03 MN 5.3.1.5 GO:0000287 ... P24300 37185266
    11803 8ay3:B (1.9) BS01 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11804 8ay3:B (1.9) BS02 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11805 8ay3:B (1.9) BS03 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11806 8ay3:B (1.9) BS04 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11807 8ay6:B (1.84) BS01 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11808 8ay6:B (1.84) BS02 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11809 8ay6:B (1.84) BS03 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11810 8ay6:B (1.84) BS04 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11811 8ay7:B (2.131) BS01 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11812 8ay7:B (2.131) BS02 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11813 8ay7:B (2.131) BS03 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11814 8ay7:B (2.131) BS04 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11815 8ay8:B (1.78) BS01 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11816 8ay8:B (1.78) BS02 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11817 8ay8:B (1.78) BS03 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11818 8ay9:B (2.281) BS01 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11819 8ay9:B (2.281) BS02 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11820 8ay9:B (2.281) BS03 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11821 8ay9:B (2.281) BS04 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11822 8aya:B (1.742) BS01 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11823 8aya:B (1.742) BS02 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11824 8aya:B (1.742) BS03 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11825 8aya:B (1.742) BS04 MN 3.1.3.16 GO:0004722 ... Q9CAJ0 36897942
    11826 8bah:A (4.13) BS01 MN 3.1.-.- GO:0000014 ... P49959 36577401
    11827 8bah:A (4.13) BS02 MN 3.1.-.- GO:0000014 ... P49959 36577401
    11828 8bah:B (4.13) BS01 MN 3.1.-.- GO:0000014 ... P49959 36577401
    11829 8bah:B (4.13) BS02 MN 3.1.-.- GO:0000014 ... P49959 36577401
    11830 8bo1:B (2.501) BS02 MN 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912
    11831 8bo1:B (2.501) BS04 MN 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912
    11832 8bo1:D (2.501) BS02 MN 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912
    11833 8bo1:D (2.501) BS04 MN 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912
    11834 8bp2:BBB (2.8) BS04 MN 5.6.2.2 GO:0003677 ... P66937 36675148
    11835 8bp2:DDD (2.8) BS04 MN 5.6.2.2 GO:0003677 ... P66937 36675148
    11836 8br0:B (2.218) BS01 MN 4.6.1.1 GO:0000774 ... A0A9P1NJI6
    P07737
    37747912
    11837 8br0:B (2.218) BS02 MN 4.6.1.1 GO:0000774 ... A0A9P1NJI6
    P07737
    37747912
    11838 8br0:D (2.218) BS01 MN 4.6.1.1 GO:0000774 ... A0A9P1NJI6
    P07737
    37747912
    11839 8br0:D (2.218) BS02 MN 4.6.1.1 GO:0000774 ... A0A9P1NJI6
    P07737
    37747912
    11840 8brp:A (2.6) BS01 MN ? GO:0046872 ... D8G6F7 36791048
    11841 8brp:A (2.6) BS02 MN ? GO:0046872 ... D8G6F7 36791048
    11842 8brp:B (2.6) BS01 MN ? GO:0046872 ... D8G6F7 36791048
    11843 8brp:B (2.6) BS02 MN ? GO:0046872 ... D8G6F7 36791048
    11844 8brp:C (2.6) BS01 MN ? GO:0046872 ... D8G6F7 36791048
    11845 8brp:C (2.6) BS02 MN ? GO:0046872 ... D8G6F7 36791048
    11846 8brp:D (2.6) BS01 MN ? GO:0046872 ... D8G6F7 36791048
    11847 8brp:D (2.6) BS02 MN ? GO:0046872 ... D8G6F7 36791048
    11848 8btt:A (2.6) BS01 MN 6.5.1.8 GO:0001701 ... Q9Y3I0 38493148
    11849 8btt:B (2.6) BS01 MN 6.5.1.8 GO:0001701 ... Q9Y3I0 38493148
    11850 8bvk:A (2.0) BS01 MN N/A N/A N/A 37932298
    11851 8bvk:A (2.0) BS02 MN N/A N/A N/A 37932298
    11852 8bvk:B (2.0) BS01 MN N/A N/A N/A 37932298
    11853 8c2z:A (1.91) BS02 MN 2.7.12.1 GO:0004672 ... Q9Y463 N/A
    11854 8c2z:A (1.91) BS03 MN 2.7.12.1 GO:0004672 ... Q9Y463 N/A
    11855 8coh:A (1.3) BS01 MN N/A N/A N/A 38142486
    11856 8crd:A (1.35) BS02 MN 4.1.1.102 GO:0005737 ... A2QHE5 N/A
    11857 8ctf:A (2.14) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    11858 8ctf:A (2.14) BS03 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    11859 8d1x:A (2.8) BS01 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... B4RJ22 N/A
    11860 8d1x:B (2.8) BS01 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... B4RJ22 N/A
    11861 8d1x:C (2.8) BS01 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... B4RJ22 N/A
    11862 8d1x:D (2.8) BS01 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... B4RJ22 N/A
    11863 8d1x:E (2.8) BS01 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... B4RJ22 N/A
    11864 8d1x:F (2.8) BS01 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... B4RJ22 N/A
    11865 8d3l:I (3.49) BS03 MN 3.1.12.1 GO:0004527 ... A0A4Y7WTW2 36272411
    11866 8d3l:J (3.49) BS03 MN 3.1.12.1 GO:0004527 ... A0A4Y7WTW2 36272411
    11867 8d3m:I (3.41) BS02 MN 3.1.12.1 GO:0004527 ... A0A4Y7WTW2 36272411
    11868 8d3p:I (4.26) BS04 MN 3.1.12.1 GO:0004527 ... A0A4Y7WTW2 36272411
    11869 8d3q:I (3.9) BS03 MN 3.1.12.1 GO:0004527 ... A0A4Y7WTW2 36272411
    11870 8d3z:A (2.56) BS02 MN 2.4.1.- N/A A0A2K2AMS7 36849618
    11871 8d3z:B (2.56) BS02 MN 2.4.1.- N/A A0A2K2AMS7 36849618
    11872 8d9p:A (1.9) BS02 MN N/A N/A N/A 36213121
    11873 8d9p:A (1.9) BS03 MN N/A N/A N/A 36213121
    11874 8dai:A (1.14) BS03 MN 1.5.1.3 GO:0004146 ... P0ABQ4 38386706
    11875 8dal:A (2.2) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    11876 8dal:A (2.2) BS03 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    11877 8dc9:A (2.47) BS03 MN 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 36130078
    11878 8dc9:A (2.47) BS04 MN 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 36130078
    11879 8dc9:B (2.47) BS03 MN 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 36130078
    11880 8dc9:B (2.47) BS04 MN 3.1.-.-
    6.5.1.8
    GO:0006396 ... O59245 36130078
    11881 8ddb:A (2.15) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    11882 8ddb:A (2.15) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    11883 8dde:A (2.22) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    11884 8dde:A (2.22) BS03 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    11885 8dge:A (1.89) BS02 MN N/A GO:0005975 ... N/A 37500984
    11886 8dge:B (1.89) BS02 MN N/A GO:0005975 ... N/A 37500984
    11887 8dge:C (1.89) BS02 MN N/A GO:0005975 ... N/A 37500984
    11888 8dge:D (1.89) BS02 MN N/A GO:0005975 ... N/A 37500984
    11889 8dhn:A (2.4) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    11890 8dhn:A (2.4) BS03 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    11891 8dip:A (2.5) BS01 MN ? GO:0003723 ... C6H0Y9 36603507
    11892 8dip:A (2.5) BS02 MN ? GO:0003723 ... C6H0Y9 36603507
    11893 8djv:A (2.08) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    11894 8djv:A (2.08) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    11895 8djy:A (2.5) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    11896 8djy:A (2.5) BS03 MN 3.1.-.- GO:0003723 ... C3W5S0 36655124
    11897 8dl1:A (2.09) BS13 MN N/A GO:0005975 ... N/A 37500984
    11898 8dl1:B (2.09) BS12 MN N/A GO:0005975 ... N/A 37500984
    11899 8dl1:C (2.09) BS13 MN N/A GO:0005975 ... N/A 37500984
    11900 8dl1:D (2.09) BS12 MN N/A GO:0005975 ... N/A 37500984
    11901 8dl2:A (1.99) BS09 MN N/A GO:0005975 ... N/A 37500984
    11902 8dl2:B (1.99) BS09 MN N/A GO:0005975 ... N/A 37500984
    11903 8dl2:C (1.99) BS09 MN N/A GO:0005975 ... N/A 37500984
    11904 8dl2:D (1.99) BS09 MN N/A GO:0005975 ... N/A 37500984
    11905 8dnu:A (2.73) BS01 MN 2.3.1.225
    6.3.1.2
    GO:0001525 ... P15104 36450447
    11906 8dpj:A (2.45) BS01 MN ? GO:0003723 ... C6H0Y9 36603507
    11907 8dpj:A (2.45) BS02 MN ? GO:0003723 ... C6H0Y9 36603507
    11908 8dq3:A (1.67) BS01 MN 1.17.4.1 GO:0004748 ... A0A142G3G1 N/A
    11909 8dq3:A (1.67) BS02 MN 1.17.4.1 GO:0004748 ... A0A142G3G1 N/A
    11910 8dq3:B (1.67) BS01 MN 1.17.4.1 GO:0004748 ... A0A142G3G1 N/A
    11911 8dq3:B (1.67) BS02 MN 1.17.4.1 GO:0004748 ... A0A142G3G1 N/A
    11912 8dq3:C (1.67) BS01 MN 1.17.4.1 GO:0004748 ... A0A142G3G1 N/A
    11913 8dq3:C (1.67) BS02 MN 1.17.4.1 GO:0004748 ... A0A142G3G1 N/A
    11914 8dq3:D (1.67) BS01 MN 1.17.4.1 GO:0004748 ... A0A142G3G1 N/A
    11915 8dq3:D (1.67) BS02 MN 1.17.4.1 GO:0004748 ... A0A142G3G1 N/A
    11916 8dq4:A (2.35) BS01 MN 1.17.4.1 GO:0004748 ... A5FCJ5 N/A
    11917 8dq4:A (2.35) BS02 MN 1.17.4.1 GO:0004748 ... A5FCJ5 N/A
    11918 8dq4:B (2.35) BS01 MN 1.17.4.1 GO:0004748 ... A5FCJ5 N/A
    11919 8dq4:B (2.35) BS02 MN 1.17.4.1 GO:0004748 ... A5FCJ5 N/A
    11920 8dq5:A (2.1) BS01 MN 1.17.4.1 GO:0004748 ... A5FCJ5 N/A
    11921 8dq5:A (2.1) BS02 MN 1.17.4.1 GO:0004748 ... A5FCJ5 N/A
    11922 8dq5:B (2.1) BS01 MN 1.17.4.1 GO:0004748 ... A5FCJ5 N/A
    11923 8dq5:B (2.1) BS02 MN 1.17.4.1 GO:0004748 ... A5FCJ5 N/A
    11924 8dqs:A (2.45) BS01 MN ? GO:0003723 ... C6H0Y9 N/A
    11925 8dqs:A (2.45) BS02 MN ? GO:0003723 ... C6H0Y9 N/A
    11926 8dtw:A (2.33) BS01 MN ? GO:0003723 ... C6H0Y9 36603507
    11927 8dtw:A (2.33) BS02 MN ? GO:0003723 ... C6H0Y9 36603507
    11928 8dvo:A (2.33) BS01 MN ? GO:0003723 ... C6H0Y9 N/A
    11929 8dvo:A (2.33) BS02 MN ? GO:0003723 ... C6H0Y9 N/A
    11930 8dwk:A (2.5) BS02 MN 3.1.3.16 GO:0016787 ... P62136 37002212
    11931 8dwk:A (2.5) BS03 MN 3.1.3.16 GO:0016787 ... P62136 37002212
    11932 8dwk:B (2.5) BS02 MN 3.1.3.16 GO:0016787 ... P62136 37002212
    11933 8dwk:B (2.5) BS03 MN 3.1.3.16 GO:0016787 ... P62136 37002212
    11934 8e0v:A (2.3) BS01 MN 2.5.1.54 GO:0003849 ... P0AB91 36197914
    11935 8e0v:B (2.3) BS02 MN 2.5.1.54 GO:0003849 ... P0AB91 36197914
    11936 8e0v:C (2.3) BS01 MN 2.5.1.54 GO:0003849 ... P0AB91 36197914
    11937 8e0v:D (2.3) BS02 MN 2.5.1.54 GO:0003849 ... P0AB91 36197914
    11938 8e0x:A (1.97) BS01 MN 2.5.1.54 GO:0003849 ... P0AB91 36197914
    11939 8e0x:B (1.97) BS01 MN 2.5.1.54 GO:0003849 ... P0AB91 36197914
    11940 8e0x:D (1.97) BS01 MN 2.5.1.54 GO:0003849 ... P0AB91 36197914
    11941 8e1q:A (2.5) BS01 MN ? GO:0003723 ... C6H0Y9 N/A
    11942 8e1q:A (2.5) BS02 MN ? GO:0003723 ... C6H0Y9 N/A
    11943 8e1s:A (1.72) BS03 MN 2.7.4.24 GO:0000829 ... O74429 36468882
    11944 8e1s:A (1.72) BS04 MN 2.7.4.24 GO:0000829 ... O74429 36468882
    11945 8e21:A (2.61) BS01 MN ? GO:0003723 ... C6H0Y9 N/A
    11946 8e21:A (2.61) BS02 MN ? GO:0003723 ... C6H0Y9 N/A
    11947 8e4s:A (2.4) BS01 MN ? GO:0003723 ... C6H0Y9 36603507
    11948 8e4s:A (2.4) BS02 MN ? GO:0003723 ... C6H0Y9 36603507
    11949 8e5m:A (1.84) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11950 8e5m:A (1.84) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11951 8e5m:B (1.84) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11952 8e5m:B (1.84) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11953 8e5m:C (1.84) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11954 8e5m:C (1.84) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11955 8e5m:D (1.84) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11956 8e5m:D (1.84) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11957 8e5m:E (1.84) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11958 8e5m:E (1.84) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11959 8e5m:F (1.84) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11960 8e5m:F (1.84) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11961 8e5n:A (2.538) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11962 8e5n:A (2.538) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11963 8e5n:B (2.538) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11964 8e5n:B (2.538) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11965 8e5n:C (2.538) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11966 8e5n:C (2.538) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11967 8e5n:D (2.538) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11968 8e5n:D (2.538) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11969 8e5n:E (2.538) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11970 8e5n:E (2.538) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11971 8e5n:F (2.538) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11972 8e5n:F (2.538) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36822300
    11973 8e60:A (2.38) BS01 MN ? GO:0005384 ... Q9RTP8 37039477
    11974 8e60:A (2.38) BS02 MN ? GO:0005384 ... Q9RTP8 37039477
    11975 8e6h:A (2.39) BS01 MN ? GO:0005384 ... Q9RTP8 37039477
    11976 8e6h:A (2.39) BS02 MN ? GO:0005384 ... Q9RTP8 37039477
    11977 8e6i:A (2.52) BS01 MN ? GO:0005384 ... Q9RTP8 37039477
    11978 8e6i:A (2.52) BS02 MN ? GO:0005384 ... Q9RTP8 37039477
    11979 8e6l:A (3.12) BS01 MN ? GO:0005384 ... Q9RTP8 37039477
    11980 8e6n:A (2.4) BS01 MN ? GO:0005384 ... Q9RTP8 37039477
    11981 8e85:A (1.72) BS03 MN 2.7.7.7 GO:0003684 ... Q9Y253 36702254
    11982 8e85:A (1.72) BS04 MN 2.7.7.7 GO:0003684 ... Q9Y253 36702254
    11983 8e86:A (1.78) BS04 MN 2.7.7.7 GO:0003684 ... Q9Y253 36702254
    11984 8e86:A (1.78) BS05 MN 2.7.7.7 GO:0003684 ... Q9Y253 36702254
    11985 8e8c:A (2.25) BS03 MN 2.7.7.7 GO:0003684 ... Q9Y253 36702254
    11986 8e8c:A (2.25) BS04 MN 2.7.7.7 GO:0003684 ... Q9Y253 36702254
    11987 8e8d:A (2.09) BS03 MN 2.7.7.7 GO:0003684 ... Q9Y253 36702254
    11988 8e8d:A (2.09) BS04 MN 2.7.7.7 GO:0003684 ... Q9Y253 36702254
    11989 8e8e:A (2.05) BS03 MN 2.7.7.7 GO:0003684 ... Q9Y253 36702254
    11990 8e8e:A (2.05) BS04 MN 2.7.7.7 GO:0003684 ... Q9Y253 36702254
    11991 8e8f:A (2.14) BS03 MN 2.7.7.7 GO:0003684 ... Q9Y253 36702254
    11992 8e8f:A (2.14) BS04 MN 2.7.7.7 GO:0003684 ... Q9Y253 36702254
    11993 8e8g:A (2.13) BS03 MN 2.7.7.7 GO:0003684 ... Q9Y253 36702254
    11994 8e8g:A (2.13) BS04 MN 2.7.7.7 GO:0003684 ... Q9Y253 36702254
    11995 8e8h:A (2.13) BS03 MN 2.7.7.7 GO:0003684 ... Q9Y253 36702254
    11996 8e8h:A (2.13) BS05 MN 2.7.7.7 GO:0003684 ... Q9Y253 36702254
    11997 8ecy:A (2.0) BS01 MN 2.3.1.225
    6.3.1.2
    GO:0001525 ... P15103 36289327
    11998 8ecy:A (2.0) BS02 MN 2.3.1.225
    6.3.1.2
    GO:0001525 ... P15103 36289327
    11999 8ecy:B (2.0) BS01 MN 2.3.1.225
    6.3.1.2
    GO:0001525 ... P15103 36289327
    12000 8ecy:B (2.0) BS02 MN 2.3.1.225
    6.3.1.2
    GO:0001525 ... P15103 36289327

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218