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BioLiP
Download all results in tab-seperated text for 12805 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    9401 6o75:A (2.6) BS03 MN 2.7.7.-
    3.1.-.-
    GO:0004519 ... B6YWB8 31326272
    9402 6o75:A (2.6) BS04 MN 2.7.7.-
    3.1.-.-
    GO:0004519 ... B6YWB8 31326272
    9403 6o78:A (2.8) BS02 MN 2.7.7.-
    3.1.-.-
    GO:0004519 ... B6YWB8 31326272
    9404 6o78:A (2.8) BS03 MN 2.7.7.-
    3.1.-.-
    GO:0004519 ... B6YWB8 31326272
    9405 6o7d:A (2.81) BS02 MN 2.7.7.-
    3.1.-.-
    GO:0004519 ... B6YWB8 31326272
    9406 6o7d:A (2.81) BS03 MN 2.7.7.-
    3.1.-.-
    GO:0004519 ... B6YWB8 31326272
    9407 6o7e:A (3.2) BS05 MN 2.7.7.-
    3.1.-.-
    GO:0004519 ... B6YWB8 31326272
    9408 6o7e:A (3.2) BS06 MN 2.7.7.-
    3.1.-.-
    GO:0004519 ... B6YWB8 31326272
    9409 6obp:A (2.7) BS01 MN 3.1.3.16 GO:0000164 ... P62136 31548429
    9410 6obq:A (1.84) BS02 MN 3.1.3.16 GO:0016787 ... P62136 31548429
    9411 6obq:B (1.84) BS02 MN 3.1.3.16 GO:0016787 ... P62136 31548429
    9412 6obr:A (1.5) BS02 MN 3.1.3.16 GO:0016787 ... P62136 31548429
    9413 6obr:A (1.5) BS03 MN 3.1.3.16 GO:0016787 ... P62136 31548429
    9414 6obr:B (1.5) BS02 MN 3.1.3.16 GO:0016787 ... P62136 31548429
    9415 6obr:B (1.5) BS03 MN 3.1.3.16 GO:0016787 ... P62136 31548429
    9416 6obs:A (1.803) BS01 MN 3.1.3.16 GO:0016787 ... P62136 31548429
    9417 6obs:A (1.803) BS02 MN 3.1.3.16 GO:0016787 ... P62136 31548429
    9418 6obs:B (1.803) BS01 MN 3.1.3.16 GO:0016787 ... P62136 31548429
    9419 6obs:B (1.803) BS02 MN 3.1.3.16 GO:0016787 ... P62136 31548429
    9420 6obu:A (1.95) BS02 MN 3.1.3.16 GO:0016787 ... P62136 31548429
    9421 6obu:A (1.95) BS03 MN 3.1.3.16 GO:0016787 ... P62136 31548429
    9422 6obu:B (1.95) BS02 MN 3.1.3.16 GO:0016787 ... P62136 31548429
    9423 6obu:B (1.95) BS03 MN 3.1.3.16 GO:0016787 ... P62136 31548429
    9424 6oe2:A (3.0) BS01 MN 3.2.1.169 N/A Q8A9F0 31794207
    9425 6oi7:A (2.9) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9426 6oi7:B (2.9) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9427 6oi7:C (2.9) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9428 6oi7:D (2.9) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9429 6oi7:E (2.9) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9430 6oi7:F (2.9) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9431 6oiv:A (3.06) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9432 6oiv:B (3.06) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9433 6oiv:C (3.06) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9434 6oiv:D (3.06) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9435 6oiv:E (3.06) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9436 6oiv:F (3.06) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9437 6oiw:A (3.35) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9438 6oiw:B (3.35) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9439 6oiw:C (3.35) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9440 6oiw:D (3.35) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9441 6oiw:E (3.35) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9442 6oiw:F (3.35) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9443 6oix:A (3.15) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9444 6oix:B (3.15) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9445 6oix:C (3.15) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9446 6oix:D (3.15) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9447 6oix:E (3.15) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9448 6oix:F (3.15) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9449 6oiy:A (3.29) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9450 6oiy:B (3.29) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9451 6oiy:C (3.29) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9452 6oiy:D (3.29) BS01 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9453 6oiy:E (3.29) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9454 6oiy:F (3.29) BS02 MN 3.1.5.1 GO:0000287 ... P15723 31019074
    9455 6omp:A (1.7) BS01 MN ? GO:0005737 ... A0A0A0UVH9 31291107
    9456 6omp:A (1.7) BS02 MN ? GO:0005737 ... A0A0A0UVH9 31291107
    9457 6omp:A (1.7) BS03 MN ? GO:0005737 ... A0A0A0UVH9 31291107
    9458 6omp:B (1.7) BS01 MN ? GO:0005737 ... A0A0A0UVH9 31291107
    9459 6omp:B (1.7) BS02 MN ? GO:0005737 ... A0A0A0UVH9 31291107
    9460 6omp:B (1.7) BS03 MN ? GO:0005737 ... A0A0A0UVH9 31291107
    9461 6omq:A (1.86) BS01 MN ? GO:0005737 ... A0A0A0UVH9 31291107
    9462 6omq:A (1.86) BS02 MN ? GO:0005737 ... A0A0A0UVH9 31291107
    9463 6omq:A (1.86) BS03 MN ? GO:0005737 ... A0A0A0UVH9 31291107
    9464 6omq:B (1.86) BS02 MN ? GO:0005737 ... A0A0A0UVH9 31291107
    9465 6omq:B (1.86) BS03 MN ? GO:0005737 ... A0A0A0UVH9 31291107
    9466 6omq:B (1.86) BS04 MN ? GO:0005737 ... A0A0A0UVH9 31291107
    9467 6omr:A (2.45) BS01 MN ? GO:0005737 ... A0A0A0UVH9 31291107
    9468 6omr:A (2.45) BS02 MN ? GO:0005737 ... A0A0A0UVH9 31291107
    9469 6omr:B (2.45) BS02 MN ? GO:0005737 ... A0A0A0UVH9 31291107
    9470 6omr:B (2.45) BS03 MN ? GO:0005737 ... A0A0A0UVH9 31291107
    9471 6onm:A (2.7) BS01 MN 4.2.3.20 GO:0000287 ... A0A1C9J6A7 31433159
    9472 6onm:A (2.7) BS02 MN 4.2.3.20 GO:0000287 ... A0A1C9J6A7 31433159
    9473 6oq7:A (2.39) BS03 MN 2.4.1.-
    3.4.22.-
    GO:0016757 ... Q9EXR0 31308519
    9474 6oqz:A (1.6) BS01 MN 5.3.1.5 GO:0000287 ... P24300 31793898
    9475 6oqz:A (1.6) BS02 MN 5.3.1.5 GO:0000287 ... P24300 31793898
    9476 6ov6:A (1.82) BS01 MN ? GO:0046872 ... G2EBB4 32736071
    9477 6ov6:B (1.82) BS01 MN ? GO:0046872 ... G2EBB4 32736071
    9478 6ov6:C (1.82) BS01 MN ? GO:0046872 ... G2EBB4 32736071
    9479 6ov8:A (2.61) BS02 MN 3.4.11.23 GO:0004177 ... P37095 32306515
    9480 6ov8:B (2.61) BS02 MN 3.4.11.23 GO:0004177 ... P37095 32306515
    9481 6ov8:C (2.61) BS02 MN 3.4.11.23 GO:0004177 ... P37095 32306515
    9482 6ov8:D (2.61) BS02 MN 3.4.11.23 GO:0004177 ... P37095 32306515
    9483 6ov8:E (2.61) BS02 MN 3.4.11.23 GO:0004177 ... P37095 32306515
    9484 6ov8:F (2.61) BS02 MN 3.4.11.23 GO:0004177 ... P37095 32306515
    9485 6ozl:A (2.1) BS03 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9486 6ozl:A (2.1) BS04 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9487 6ozl:B (2.1) BS03 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9488 6ozl:B (2.1) BS04 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9489 6ozm:A (2.15) BS03 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9490 6ozm:A (2.15) BS04 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9491 6ozm:B (2.15) BS03 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9492 6ozm:B (2.15) BS04 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9493 6ozn:A (1.9) BS03 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9494 6ozn:A (1.9) BS04 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9495 6ozn:B (1.9) BS03 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9496 6ozn:B (1.9) BS04 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9497 6ozo:A (2.235) BS03 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9498 6ozo:A (2.235) BS04 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9499 6ozo:B (2.235) BS03 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9500 6ozo:B (2.235) BS04 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9501 6ozo:B (2.235) BS05 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9502 6ozp:A (1.96) BS04 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9503 6ozp:A (1.96) BS05 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9504 6ozp:B (1.96) BS04 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9505 6ozp:B (1.96) BS05 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9506 6ozq:A (2.153) BS03 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9507 6ozq:B (2.153) BS03 MN 3.1.26.- GO:0004519 ... Q8C9A2 31444105
    9508 6p1o:A (1.65) BS04 MN 2.7.7.7 GO:0003677 ... Q9NP87 31435651
    9509 6p1s:A (1.75) BS05 MN 2.7.7.7 GO:0003677 ... Q9NP87 31435651
    9510 6p1u:A (1.75) BS04 MN 2.7.7.7 GO:0003677 ... Q9NP87 31435651
    9511 6p5o:A (1.49) BS01 MN 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 31461616
    9512 6pbj:A (1.9) BS02 MN 2.5.1.54 GO:0003849 ... O53512 32217694
    9513 6pbj:B (1.9) BS02 MN 2.5.1.54 GO:0003849 ... O53512 32217694
    9514 6ph9:A (1.92) BS01 MN 3.6.1.54 GO:0005737 ... A6T5R0 32041866
    9515 6ph9:A (1.92) BS02 MN 3.6.1.54 GO:0005737 ... A6T5R0 32041866
    9516 6pib:A (2.26) BS01 MN 3.6.1.54 GO:0005737 ... A6T5R0 32041866
    9517 6pib:A (2.26) BS02 MN 3.6.1.54 GO:0005737 ... A6T5R0 32041866
    9518 6pj3:A (2.25) BS01 MN 3.6.1.54 GO:0005737 ... A6T5R0 32041866
    9519 6pj3:A (2.25) BS02 MN 3.6.1.54 GO:0005737 ... A6T5R0 32041866
    9520 6ppz:A (2.4) BS02 MN 2.5.1.56 GO:0016051 ... H2VFG5 31549502
    9521 6pro:A (2.263) BS01 MN 1.15.1.1 GO:0004784 ... P00449 N/A
    9522 6pro:B (2.263) BS01 MN 1.15.1.1 GO:0004784 ... P00449 N/A
    9523 6pup:A (1.89) BS01 MN 4.1.3.44 GO:0008033 ... B6K6D6 35693892
    9524 6pup:A (1.89) BS02 MN 4.1.3.44 GO:0008033 ... B6K6D6 35693892
    9525 6pxu:A (2.007) BS03 MN 2.4.1.41 GO:0000139 ... Q8IXK2 31548401
    9526 6pxu:B (2.007) BS02 MN 2.4.1.41 GO:0000139 ... Q8IXK2 31548401
    9527 6pxu:B (2.007) BS04 MN 2.4.1.41 GO:0000139 ... Q8IXK2 31548401
    9528 6q37:A (2.211) BS01 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    9529 6q37:A (2.211) BS02 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    9530 6q37:B (2.211) BS01 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    9531 6q37:B (2.211) BS02 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    9532 6q37:C (2.211) BS01 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    9533 6q37:C (2.211) BS02 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    9534 6q39:A (2.213) BS01 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    9535 6q39:A (2.213) BS02 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    9536 6q39:B (2.213) BS01 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    9537 6q39:B (2.213) BS02 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    9538 6q39:C (2.213) BS01 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    9539 6q39:C (2.213) BS02 MN 3.5.3.1 GO:0004053 ... P78540 31408339
    9540 6q4t:A (1.997) BS03 MN 2.7.7.7
    3.1.-.-
    GO:0000166 ... P77933 30761722
    9541 6q4u:A (2.005) BS04 MN 2.7.7.7 GO:0001882 ... P19821 30761722
    9542 6q4v:A (2.006) BS05 MN 2.7.7.7 GO:0001882 ... P19821 30761722
    9543 6q92:A (1.5) BS01 MN 3.5.3.1 GO:0000050 ... P05089 32647818
    9544 6q92:A (1.5) BS02 MN 3.5.3.1 GO:0000050 ... P05089 32647818
    9545 6q92:B (1.5) BS01 MN 3.5.3.1 GO:0000050 ... P05089 32647818
    9546 6q92:B (1.5) BS02 MN 3.5.3.1 GO:0000050 ... P05089 32647818
    9547 6q9p:A (1.66) BS01 MN 3.5.3.1 GO:0000050 ... P05089 32647818
    9548 6q9p:A (1.66) BS02 MN 3.5.3.1 GO:0000050 ... P05089 32647818
    9549 6q9p:B (1.66) BS01 MN 3.5.3.1 GO:0000050 ... P05089 32647818
    9550 6q9p:B (1.66) BS02 MN 3.5.3.1 GO:0000050 ... P05089 32647818
    9551 6qaf:A (1.61) BS01 MN 3.5.3.1 GO:0000050 ... P05089 32647818
    9552 6qaf:A (1.61) BS02 MN 3.5.3.1 GO:0000050 ... P05089 32647818
    9553 6qaf:B (1.61) BS01 MN 3.5.3.1 GO:0000050 ... P05089 32647818
    9554 6qaf:B (1.61) BS02 MN 3.5.3.1 GO:0000050 ... P05089 32647818
    9555 6qed:A (1.8) BS02 MN 3.4.11.18 GO:0006508 ... P50579 30939017
    9556 6qed:A (1.8) BS03 MN 3.4.11.18 GO:0006508 ... P50579 30939017
    9557 6qef:A (1.79) BS02 MN 3.4.11.18 GO:0006508 ... P50579 30939017
    9558 6qef:A (1.79) BS03 MN 3.4.11.18 GO:0006508 ... P50579 30939017
    9559 6qeg:A (2.08) BS02 MN 3.4.11.18 GO:0006508 ... P50579 30939017
    9560 6qeg:A (2.08) BS03 MN 3.4.11.18 GO:0006508 ... P50579 30939017
    9561 6qeh:A (2.17) BS02 MN 3.4.11.18 GO:0006508 ... P50579 30939017
    9562 6qeh:A (2.17) BS03 MN 3.4.11.18 GO:0006508 ... P50579 30939017
    9563 6qei:A (1.8) BS02 MN 3.4.11.18 GO:0006508 ... P50579 30939017
    9564 6qei:A (1.8) BS03 MN 3.4.11.18 GO:0006508 ... P50579 30939017
    9565 6qej:A (1.62) BS02 MN 3.4.11.18 GO:0006508 ... P50579 30939017
    9566 6qej:A (1.62) BS03 MN 3.4.11.18 GO:0006508 ... P50579 30939017
    9567 6qep:A (2.6) BS01 MN N/A GO:0030246 ... N/A 31645583
    9568 6qep:A (2.6) BS02 MN N/A GO:0030246 ... N/A 31645583
    9569 6qep:A (2.6) BS03 MN N/A GO:0030246 ... N/A 31645583
    9570 6qep:A (2.6) BS04 MN N/A GO:0030246 ... N/A 31645583
    9571 6qev:B (2.7) BS02 MN N/A GO:0030246 ... N/A 31645583
    9572 6qev:B (2.7) BS03 MN N/A GO:0030246 ... N/A 31645583
    9573 6qev:B (2.7) BS04 MN N/A GO:0030246 ... N/A 31645583
    9574 6qev:B (2.7) BS05 MN N/A GO:0030246 ... N/A 31645583
    9575 6qfd:B (2.133) BS03 MN ? GO:0046872 ... Q9HSF4 31310308
    9576 6qfd:B (2.133) BS04 MN ? GO:0046872 ... Q9HSF4 31310308
    9577 6qfd:B (2.133) BS05 MN ? GO:0046872 ... Q9HSF4 31310308
    9578 6qfd:C (2.133) BS03 MN ? GO:0046872 ... Q9HSF4 31310308
    9579 6qfd:C (2.133) BS04 MN ? GO:0046872 ... Q9HSF4 31310308
    9580 6qfd:D (2.133) BS03 MN ? GO:0046872 ... Q9HSF4 31310308
    9581 6qfk:A (2.0) BS02 MN N/A GO:0030246 ... N/A 31645583
    9582 6qfk:A (2.0) BS03 MN N/A GO:0030246 ... N/A 31645583
    9583 6qfk:A (2.0) BS04 MN N/A GO:0030246 ... N/A 31645583
    9584 6qfk:A (2.0) BS05 MN N/A GO:0030246 ... N/A 31645583
    9585 6qfo:A (2.3) BS01 MN N/A GO:0030246 ... N/A 31645583
    9586 6qfo:A (2.3) BS02 MN N/A GO:0030246 ... N/A 31645583
    9587 6qfo:A (2.3) BS03 MN N/A GO:0030246 ... N/A 31645583
    9588 6qfo:A (2.3) BS04 MN N/A GO:0030246 ... N/A 31645583
    9589 6qgv:A (1.4) BS01 MN 1.14.11.29 GO:0005506 ... Q9GZT9 31057728
    9590 6qh0:A (2.436) BS03 MN ? GO:0046872 ... Q9HSF4 31310308
    9591 6qh0:B (2.436) BS03 MN ? GO:0046872 ... Q9HSF4 31310308
    9592 6qh0:C (2.436) BS03 MN ? GO:0046872 ... Q9HSF4 31310308
    9593 6qh0:D (2.436) BS03 MN ? GO:0046872 ... Q9HSF4 31310308
    9594 6qil:A (2.0) BS03 MN ? GO:0046872 ... Q9HSF4 31310308
    9595 6qil:A (2.0) BS04 MN ? GO:0046872 ... Q9HSF4 31310308
    9596 6qil:A (2.0) BS05 MN ? GO:0046872 ... Q9HSF4 31310308
    9597 6qil:B (2.0) BS03 MN ? GO:0046872 ... Q9HSF4 31310308
    9598 6qil:B (2.0) BS04 MN ? GO:0046872 ... Q9HSF4 31310308
    9599 6qil:B (2.0) BS05 MN ? GO:0046872 ... Q9HSF4 31310308
    9600 6qil:B (2.0) BS06 MN ? GO:0046872 ... Q9HSF4 31310308

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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