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BioLiP
Download all results in tab-seperated text for 12805 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    8801 6eiu:A (1.88) BS02 MN 1.14.11.67 N/A Q9UGL1 N/A
    8802 6eiu:A (1.88) BS03 MN 1.14.11.67 N/A Q9UGL1 N/A
    8803 6eiy:A (2.15) BS02 MN 1.14.11.67 N/A Q9UGL1 N/A
    8804 6eiy:A (2.15) BS03 MN 1.14.11.67 N/A Q9UGL1 N/A
    8805 6ej0:A (2.06) BS02 MN 1.14.11.67 N/A Q9UGL1 N/A
    8806 6ej0:A (2.06) BS03 MN 1.14.11.67 N/A Q9UGL1 N/A
    8807 6ej1:A (2.07) BS02 MN 1.14.11.67 N/A Q9UGL1 N/A
    8808 6ej1:A (2.07) BS03 MN 1.14.11.67 N/A Q9UGL1 N/A
    8809 6ek6:A (2.05) BS02 MN 1.14.11.67 N/A Q9UGL1 N/A
    8810 6elk:A (1.65) BS01 MN 1.15.1.1 GO:0004784 ... P41977 29178484
    8811 6elk:C (1.65) BS01 MN 1.15.1.1 GO:0004784 ... P41977 29178484
    8812 6eql:A (2.38) BS02 MN 2.4.1.186 GO:0016757 ... P46976 30356213
    8813 6eql:B (2.38) BS02 MN 2.4.1.186 GO:0016757 ... P46976 30356213
    8814 6ev3:A (1.3) BS02 MN 4.1.1.102 GO:0005737 ... A2QHE5 29259125
    8815 6ev4:A (1.14) BS02 MN 4.1.1.102 GO:0005737 ... A2QHE5 29259125
    8816 6ev5:A (1.28) BS01 MN 4.1.1.102 GO:0005737 ... A2QHE5 29259125
    8817 6ev6:A (1.1) BS01 MN 4.1.1.102 GO:0005737 ... A2QHE5 29259125
    8818 6ev7:A (1.06) BS01 MN 4.1.1.102 GO:0005737 ... A2QHE5 29259125
    8819 6ev8:A (1.03) BS01 MN 4.1.1.102 GO:0005737 ... A2QHE5 29259125
    8820 6ev9:A (1.64) BS01 MN 4.1.1.102 GO:0005737 ... A2QHE5 29259125
    8821 6eva:A (1.64) BS01 MN 4.1.1.102 GO:0005737 ... A2QHE5 29259125
    8822 6evb:A (1.13) BS02 MN 4.1.1.102 GO:0005737 ... A2QHE5 29259125
    8823 6evc:A (1.18) BS02 MN 4.1.1.102 GO:0005737 ... A2QHE5 29259125
    8824 6evd:A (1.19) BS01 MN 4.1.1.102 GO:0005737 ... A2QHE5 29259125
    8825 6eve:A (2.05) BS02 MN 4.1.1.102 GO:0005737 ... Q03034 29259125
    8826 6eve:B (2.05) BS02 MN 4.1.1.102 GO:0005737 ... Q03034 29259125
    8827 6eve:C (2.05) BS02 MN 4.1.1.102 GO:0005737 ... Q03034 29259125
    8828 6eve:D (2.05) BS02 MN 4.1.1.102 GO:0005737 ... Q03034 29259125
    8829 6eve:D (2.05) BS03 MN 4.1.1.102 GO:0005737 ... Q03034 29259125
    8830 6evf:A (2.06) BS02 MN 4.1.1.102 GO:0005737 ... Q03034 29259125
    8831 6evf:B (2.06) BS02 MN 4.1.1.102 GO:0005737 ... Q03034 29259125
    8832 6evf:C (2.06) BS02 MN 4.1.1.102 GO:0005737 ... Q03034 29259125
    8833 6evf:D (2.06) BS02 MN 4.1.1.102 GO:0005737 ... Q03034 29259125
    8834 6ex5:A (1.75) BS01 MN 1.15.1.1 GO:0004784 ... Q2G261 N/A
    8835 6ex5:B (1.75) BS01 MN 1.15.1.1 GO:0004784 ... Q2G261 N/A
    8836 6ey1:A (1.199) BS01 MN 1.14.11.29 GO:0005506 ... I6QVT6 30519597
    8837 6ey7:A (2.9) BS01 MN 3.1.-.- GO:0051276 ... P16732 31458978
    8838 6ey7:A (2.9) BS02 MN 3.1.-.- GO:0051276 ... P16732 31458978
    8839 6ey7:B (2.9) BS01 MN 3.1.-.- GO:0051276 ... P16732 31458978
    8840 6ey7:B (2.9) BS02 MN 3.1.-.- GO:0051276 ... P16732 31458978
    8841 6ey7:C (2.9) BS01 MN 3.1.-.- GO:0051276 ... P16732 31458978
    8842 6ey7:C (2.9) BS02 MN 3.1.-.- GO:0051276 ... P16732 31458978
    8843 6ey7:D (2.9) BS01 MN 3.1.-.- GO:0051276 ... P16732 31458978
    8844 6ey7:D (2.9) BS02 MN 3.1.-.- GO:0051276 ... P16732 31458978
    8845 6eyt:A (2.21) BS01 MN ? GO:0000166 ... A0A0H3NMP8 29449376
    8846 6eyt:B (2.21) BS01 MN ? GO:0000166 ... A0A0H3NMP8 29449376
    8847 6ezj:A (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8848 6ezj:A (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8849 6ezj:B (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8850 6ezj:B (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8851 6ezj:C (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8852 6ezj:C (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8853 6ezj:D (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8854 6ezj:D (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8855 6ezj:E (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8856 6ezj:E (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8857 6ezj:F (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8858 6ezj:F (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8859 6ezj:G (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8860 6ezj:G (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8861 6ezj:H (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8862 6ezj:H (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8863 6ezj:I (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8864 6ezj:I (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8865 6ezj:J (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8866 6ezj:J (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8867 6ezj:K (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8868 6ezj:K (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8869 6ezj:L (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8870 6ezj:L (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8871 6ezj:M (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8872 6ezj:M (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8873 6ezj:N (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8874 6ezj:N (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8875 6ezj:O (3.1) BS01 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8876 6ezj:O (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8877 6ezj:P (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8878 6ezj:P (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8879 6ezj:Q (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8880 6ezj:Q (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8881 6ezj:R (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8882 6ezj:R (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8883 6ezj:S (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8884 6ezj:S (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8885 6ezj:T (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8886 6ezj:T (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8887 6ezj:U (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8888 6ezj:U (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8889 6ezj:V (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8890 6ezj:V (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8891 6ezj:W (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8892 6ezj:W (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8893 6ezj:X (3.1) BS02 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8894 6ezj:X (3.1) BS03 MN 4.2.1.19 GO:0000105 ... O23346 29434040
    8895 6ezm:A (3.2) BS01 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8896 6ezm:A (3.2) BS03 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8897 6ezm:B (3.2) BS01 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8898 6ezm:B (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8899 6ezm:C (3.2) BS01 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8900 6ezm:C (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8901 6ezm:D (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8902 6ezm:D (3.2) BS03 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8903 6ezm:E (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8904 6ezm:E (3.2) BS04 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8905 6ezm:F (3.2) BS01 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8906 6ezm:F (3.2) BS04 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8907 6ezm:G (3.2) BS01 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8908 6ezm:G (3.2) BS03 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8909 6ezm:H (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8910 6ezm:H (3.2) BS03 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8911 6ezm:I (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8912 6ezm:I (3.2) BS04 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8913 6ezm:J (3.2) BS01 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8914 6ezm:J (3.2) BS04 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8915 6ezm:K (3.2) BS01 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8916 6ezm:K (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8917 6ezm:L (3.2) BS01 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8918 6ezm:L (3.2) BS05 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8919 6ezm:M (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8920 6ezm:M (3.2) BS04 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8921 6ezm:N (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8922 6ezm:N (3.2) BS03 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8923 6ezm:O (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8924 6ezm:O (3.2) BS03 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8925 6ezm:P (3.2) BS03 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8926 6ezm:P (3.2) BS05 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8927 6ezm:Q (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8928 6ezm:Q (3.2) BS04 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8929 6ezm:R (3.2) BS03 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8930 6ezm:R (3.2) BS04 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8931 6ezm:S (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8932 6ezm:S (3.2) BS05 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8933 6ezm:T (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8934 6ezm:T (3.2) BS05 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8935 6ezm:U (3.2) BS01 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8936 6ezm:U (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8937 6ezm:V (3.2) BS01 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8938 6ezm:V (3.2) BS05 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8939 6ezm:W (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8940 6ezm:W (3.2) BS04 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8941 6ezm:X (3.2) BS02 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8942 6ezm:X (3.2) BS04 MN 4.2.1.19 GO:0000105 ... P06633 29434040
    8943 6f0w:A (1.301) BS02 MN 1.14.11.29 GO:0005506 ... I6QVT6 30519597
    8944 6f4n:A (2.541) BS01 MN 1.14.11.73
    3.4.-.-
    N/A Q8N371 29563586
    8945 6f4n:B (2.541) BS01 MN 1.14.11.73
    3.4.-.-
    N/A Q8N371 29563586
    8946 6f4o:A (1.28) BS01 MN 1.14.11.73
    3.4.-.-
    N/A Q8N371 29563586
    8947 6f4p:A (1.45) BS02 MN 1.14.11.73
    3.4.-.-
    N/A Q8N371 29563586
    8948 6f4q:A (1.12) BS02 MN 1.14.11.73
    3.4.-.-
    N/A Q8N371 29563586
    8949 6f4r:A (1.3) BS02 MN 1.14.11.73
    3.4.-.-
    N/A Q8N371 29563586
    8950 6f4s:A (1.461) BS02 MN 1.14.11.73
    3.4.-.-
    N/A Q8N371 29563586
    8951 6f4t:A (1.22) BS02 MN 1.14.11.73
    3.4.-.-
    N/A Q8N371 29563586
    8952 6f6b:A (2.009) BS02 MN 1.17.4.1 GO:0009263 ... Q5KW80 30689052
    8953 6f6e:A (1.627) BS02 MN 1.17.4.1 GO:0009263 ... Q5KW80 29946980
    8954 6f6e:B (1.627) BS02 MN 1.17.4.1 GO:0009263 ... Q5KW80 29946980
    8955 6f6g:A (1.991) BS01 MN 1.17.4.1 GO:0009263 ... Q5KW80 29946980
    8956 6f6g:B (1.991) BS01 MN 1.17.4.1 GO:0009263 ... Q5KW80 29946980
    8957 6f6k:A (1.982) BS01 MN 1.17.4.1 GO:0009263 ... Q5KW80 29946980
    8958 6f6k:B (1.982) BS01 MN 1.17.4.1 GO:0009263 ... Q5KW80 29946980
    8959 6f6m:A (1.393) BS02 MN 1.17.4.1 GO:0009263 ... Q5KW80 30689052
    8960 6f6m:B (1.393) BS02 MN 1.17.4.1 GO:0009263 ... Q5KW80 30689052
    8961 6fb9:A (2.95) BS04 MN 3.1.-.- GO:0004519 ... P05725 29980759
    8962 6fbc:A (1.54) BS04 MN 2.7.7.7 GO:0001882 ... P19821 30224478
    8963 6fbc:A (1.54) BS05 MN 2.7.7.7 GO:0001882 ... P19821 30224478
    8964 6fbd:A (2.099) BS03 MN 2.7.7.7 GO:0001882 ... P19821 30224478
    8965 6fbd:A (2.099) BS04 MN 2.7.7.7 GO:0001882 ... P19821 30224478
    8966 6fbe:A (1.589) BS03 MN 2.7.7.7 GO:0001882 ... P19821 30224478
    8967 6fbe:A (1.589) BS04 MN 2.7.7.7 GO:0001882 ... P19821 30224478
    8968 6fbf:A (2.001) BS03 MN 2.7.7.7 GO:0001882 ... P19821 30224478
    8969 6fbf:A (2.001) BS04 MN 2.7.7.7 GO:0001882 ... P19821 30224478
    8970 6fbg:A (1.702) BS03 MN 2.7.7.7 GO:0001882 ... P19821 30224478
    8971 6fbg:A (1.702) BS04 MN 2.7.7.7 GO:0001882 ... P19821 30224478
    8972 6fbh:A (1.8) BS03 MN 2.7.7.7 GO:0001882 ... P19821 30224478
    8973 6fbh:A (1.8) BS04 MN 2.7.7.7 GO:0001882 ... P19821 30224478
    8974 6fbi:A (1.9) BS04 MN 2.7.7.7 GO:0001882 ... P19821 30224478
    8975 6fbi:A (1.9) BS05 MN 2.7.7.7 GO:0001882 ... P19821 30224478
    8976 6fke:A (2.151) BS02 MN 3.1.11.2 GO:0003677 ... Q9K100 30329088
    8977 6fm4:B (2.7) BS03 MN 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    31276392
    8978 6fm4:B (2.7) BS04 MN 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    31276392
    8979 6fm4:D (2.7) BS03 MN 5.6.2.2 GO:0003677 ... P66937
    Q99XG5
    31276392
    8980 6fqm:B (3.06) BS03 MN 5.6.2.2 GO:0003677 ... P66937 29538767
    8981 6fqm:D (3.06) BS03 MN 5.6.2.2 GO:0003677 ... P66937 29538767
    8982 6fqm:b (3.06) BS03 MN 5.6.2.2 GO:0003677 ... P66937 29538767
    8983 6fqm:d (3.06) BS03 MN 5.6.2.2 GO:0003677 ... P66937 29538767
    8984 6fqs:B (3.11) BS03 MN 5.6.2.2 GO:0003677 ... P66937 29538767
    8985 6fqs:D (3.11) BS03 MN 5.6.2.2 GO:0003677 ... P66937 29538767
    8986 6fs6:A (2.291) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    8987 6fs6:A (2.291) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    8988 6fs6:B (2.291) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    8989 6fs6:B (2.291) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    8990 6fs6:C (2.291) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    8991 6fs6:C (2.291) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    8992 6fs6:D (2.291) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    8993 6fs6:D (2.291) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    8994 6fs6:E (2.291) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    8995 6fs6:E (2.291) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    8996 6fs6:F (2.291) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    8997 6fs6:F (2.291) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    8998 6fs7:A (1.96) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    8999 6fs7:A (1.96) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893
    9000 6fs7:B (1.96) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 29941893

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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