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BioLiP
Download all results in tab-seperated text for 30 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6o8v:A (1.3) BS01 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    2 6o9f:A (2.48) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    3 6o9f:B (2.48) BS04 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    4 6o9f:C (2.48) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    5 6o9f:D (2.48) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    6 6o9f:E (2.48) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    7 6o9f:F (2.48) BS01 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    8 6o9f:F (2.48) BS04 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    9 6osz:A (1.43) BS02 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    10 6osz:B (1.43) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    11 6osz:C (1.43) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    12 6osz:D (1.43) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    13 6osz:E (1.43) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    14 6osz:F (1.43) BS01 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    15 6osz:F (1.43) BS04 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    16 6xok:A (1.3) BS01 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    17 6xrv:A (1.43) BS02 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    18 6xrv:B (1.43) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    19 6xrv:C (1.43) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    20 6xrv:D (1.43) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    21 6xrv:E (1.43) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    22 6xrv:F (1.43) BS01 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    23 6xrv:F (1.43) BS04 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    24 6xs3:A (2.48) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    25 6xs3:B (2.48) BS04 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    26 6xs3:C (2.48) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    27 6xs3:D (2.48) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    28 6xs3:E (2.48) BS03 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    29 6xs3:F (2.48) BS01 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    30 6xs3:F (2.48) BS04 LTV 3.1.1.3 GO:0006629 ... O59952 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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