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BioLiP
Download all results in tab-seperated text for 20 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7tzc:A (2.45) BS06 KVR ? GO:0003151 ... P11716 35580609
    2 7tzc:B (2.45) BS06 KVR ? GO:0003151 ... P11716 35580609
    3 7tzc:G (2.45) BS07 KVR ? GO:0003151 ... P11716 35580609
    4 7tzc:I (2.45) BS07 KVR ? GO:0003151 ... P11716 35580609
    5 7ua1:A (2.99) BS04 KVR ? GO:0001666 ... Q92736 35857850
    6 7ua1:B (2.99) BS04 KVR ? GO:0001666 ... Q92736 35857850
    7 7ua1:C (2.99) BS04 KVR ? GO:0001666 ... Q92736 35857850
    8 7ua1:D (2.99) BS04 KVR ? GO:0001666 ... Q92736 35857850
    9 8uq3:A (3.18) BS04 KVR ? GO:0001666 ... Q92736 39278969
    10 8uq3:B (3.18) BS04 KVR ? GO:0001666 ... Q92736 39278969
    11 8uq3:C (3.18) BS04 KVR ? GO:0001666 ... Q92736 39278969
    12 8uq3:D (3.18) BS04 KVR ? GO:0001666 ... Q92736 39278969
    13 8uxe:A (3.53) BS04 KVR ? GO:0001666 ... Q92736 39278969
    14 8uxe:B (3.53) BS04 KVR ? GO:0001666 ... Q92736 39278969
    15 8uxe:C (3.53) BS04 KVR ? GO:0001666 ... Q92736 39278969
    16 8uxe:D (3.53) BS04 KVR ? GO:0001666 ... Q92736 39278969
    17 8uxg:A (3.08) BS04 KVR ? GO:0001666 ... Q92736 39278969
    18 8uxg:B (3.08) BS04 KVR ? GO:0001666 ... Q92736 39278969
    19 8uxg:C (3.08) BS04 KVR ? GO:0001666 ... Q92736 39278969
    20 8uxg:D (3.08) BS04 KVR ? GO:0001666 ... Q92736 39278969
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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