Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 729 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 1 2 3 4 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    401 6npl:B (2.9) BS01 K ? GO:0006811 ... A0A0G2KTI4 31367042
    402 6o9u:A (2.0) BS01 K ? GO:0005242 ... D9N164 32541684
    403 6rtg:A (1.9) BS03 K N/A GO:0016757 ... N/A 32195351
    404 6rv2:A (3.0) BS01 K ? GO:0005252 ... O14649 32499642
    405 6rv2:A (3.0) BS02 K ? GO:0005252 ... O14649 32499642
    406 6rv2:A (3.0) BS03 K ? GO:0005252 ... O14649 32499642
    407 6rv2:A (3.0) BS06 K ? GO:0005252 ... O14649 32499642
    408 6rv2:B (3.0) BS01 K ? GO:0005252 ... O14649 32499642
    409 6rv2:B (3.0) BS02 K ? GO:0005252 ... O14649 32499642
    410 6rv2:B (3.0) BS03 K ? GO:0005252 ... O14649 32499642
    411 6rv2:B (3.0) BS05 K ? GO:0005252 ... O14649 32499642
    412 6rv2:C (3.0) BS01 K ? GO:0005252 ... O14649 32499642
    413 6rv2:C (3.0) BS02 K ? GO:0005252 ... O14649 32499642
    414 6rv2:C (3.0) BS03 K ? GO:0005252 ... O14649 32499642
    415 6rv2:C (3.0) BS04 K ? GO:0005252 ... O14649 32499642
    416 6rv2:D (3.0) BS01 K ? GO:0005252 ... O14649 32499642
    417 6rv2:D (3.0) BS02 K ? GO:0005252 ... O14649 32499642
    418 6rv2:D (3.0) BS03 K ? GO:0005252 ... O14649 32499642
    419 6rv2:D (3.0) BS04 K ? GO:0005252 ... O14649 32499642
    420 6rv3:A (2.9) BS01 K ? GO:0005252 ... O14649 32499642
    421 6rv3:A (2.9) BS02 K ? GO:0005252 ... O14649 32499642
    422 6rv3:A (2.9) BS03 K ? GO:0005252 ... O14649 32499642
    423 6rv3:A (2.9) BS06 K ? GO:0005252 ... O14649 32499642
    424 6rv3:B (2.9) BS01 K ? GO:0005252 ... O14649 32499642
    425 6rv3:B (2.9) BS02 K ? GO:0005252 ... O14649 32499642
    426 6rv3:B (2.9) BS03 K ? GO:0005252 ... O14649 32499642
    427 6rv3:B (2.9) BS05 K ? GO:0005252 ... O14649 32499642
    428 6rv3:C (2.9) BS01 K ? GO:0005252 ... O14649 32499642
    429 6rv3:C (2.9) BS02 K ? GO:0005252 ... O14649 32499642
    430 6rv3:C (2.9) BS03 K ? GO:0005252 ... O14649 32499642
    431 6rv3:C (2.9) BS04 K ? GO:0005252 ... O14649 32499642
    432 6rv3:D (2.9) BS01 K ? GO:0005252 ... O14649 32499642
    433 6rv3:D (2.9) BS02 K ? GO:0005252 ... O14649 32499642
    434 6rv3:D (2.9) BS03 K ? GO:0005252 ... O14649 32499642
    435 6rv3:D (2.9) BS04 K ? GO:0005252 ... O14649 32499642
    436 6rv4:A (3.1) BS01 K ? GO:0005252 ... O14649 32499642
    437 6rv4:A (3.1) BS02 K ? GO:0005252 ... O14649 32499642
    438 6rv4:A (3.1) BS03 K ? GO:0005252 ... O14649 32499642
    439 6rv4:A (3.1) BS07 K ? GO:0005252 ... O14649 32499642
    440 6rv4:B (3.1) BS01 K ? GO:0005252 ... O14649 32499642
    441 6rv4:B (3.1) BS02 K ? GO:0005252 ... O14649 32499642
    442 6rv4:B (3.1) BS03 K ? GO:0005252 ... O14649 32499642
    443 6rv4:B (3.1) BS05 K ? GO:0005252 ... O14649 32499642
    444 6rv4:C (3.1) BS01 K ? GO:0005252 ... O14649 32499642
    445 6rv4:C (3.1) BS02 K ? GO:0005252 ... O14649 32499642
    446 6rv4:C (3.1) BS03 K ? GO:0005252 ... O14649 32499642
    447 6rv4:C (3.1) BS04 K ? GO:0005252 ... O14649 32499642
    448 6rv4:D (3.1) BS01 K ? GO:0005252 ... O14649 32499642
    449 6rv4:D (3.1) BS02 K ? GO:0005252 ... O14649 32499642
    450 6rv4:D (3.1) BS03 K ? GO:0005252 ... O14649 32499642
    451 6rv4:D (3.1) BS04 K ? GO:0005252 ... O14649 32499642
    452 6s3k:A (3.7) BS01 K ? GO:0005886 ... P96589 32005818
    453 6s3k:A (3.7) BS02 K ? GO:0005886 ... P96589 32005818
    454 6s3k:A (3.7) BS03 K ? GO:0005886 ... P96589 32005818
    455 6s3k:B (3.7) BS01 K ? GO:0005886 ... P96589 32005818
    456 6s3k:B (3.7) BS02 K ? GO:0005886 ... P96589 32005818
    457 6s3k:B (3.7) BS03 K ? GO:0005886 ... P96589 32005818
    458 6ukn:A (3.65) BS01 K ? GO:0005886 ... Q9WVL3 32286222
    459 6v36:A (3.4) BS01 K ? GO:0005267 ... P97438 32059793
    460 6v36:A (3.4) BS02 K ? GO:0005267 ... P97438 32059793
    461 6v36:A (3.4) BS03 K ? GO:0005267 ... P97438 32059793
    462 6v36:A (3.4) BS04 K ? GO:0005267 ... P97438 32059793
    463 6v36:B (3.4) BS01 K ? GO:0005267 ... P97438 32059793
    464 6v36:B (3.4) BS02 K ? GO:0005267 ... P97438 32059793
    465 6v36:B (3.4) BS03 K ? GO:0005267 ... P97438 32059793
    466 6v36:B (3.4) BS04 K ? GO:0005267 ... P97438 32059793
    467 6v37:A (2.8) BS02 K ? GO:0005267 ... P97438 32059793
    468 6v37:A (2.8) BS03 K ? GO:0005267 ... P97438 32059793
    469 6v37:A (2.8) BS04 K ? GO:0005267 ... P97438 32059793
    470 6v37:A (2.8) BS05 K ? GO:0005267 ... P97438 32059793
    471 6v37:B (2.8) BS01 K ? GO:0005267 ... P97438 32059793
    472 6v37:B (2.8) BS02 K ? GO:0005267 ... P97438 32059793
    473 6v37:B (2.8) BS03 K ? GO:0005267 ... P97438 32059793
    474 6v37:B (2.8) BS05 K ? GO:0005267 ... P97438 32059793
    475 6v3c:A (3.51) BS01 K ? GO:0005267 ... P97438 32059793
    476 6v3c:A (3.51) BS02 K ? GO:0005267 ... P97438 32059793
    477 6v3c:A (3.51) BS03 K ? GO:0005267 ... P97438 32059793
    478 6v3c:A (3.51) BS04 K ? GO:0005267 ... P97438 32059793
    479 6v3c:B (3.51) BS01 K ? GO:0005267 ... P97438 32059793
    480 6v3c:B (3.51) BS02 K ? GO:0005267 ... P97438 32059793
    481 6v3c:B (3.51) BS03 K ? GO:0005267 ... P97438 32059793
    482 6v3c:B (3.51) BS04 K ? GO:0005267 ... P97438 32059793
    483 6v3i:A (3.4) BS01 K ? GO:0005267 ... P97438 32059793
    484 6v3i:A (3.4) BS02 K ? GO:0005267 ... P97438 32059793
    485 6v3i:A (3.4) BS03 K ? GO:0005267 ... P97438 32059793
    486 6v3i:A (3.4) BS04 K ? GO:0005267 ... P97438 32059793
    487 6v3i:B (3.4) BS01 K ? GO:0005267 ... P97438 32059793
    488 6v3i:B (3.4) BS02 K ? GO:0005267 ... P97438 32059793
    489 6v3i:B (3.4) BS03 K ? GO:0005267 ... P97438 32059793
    490 6v3i:B (3.4) BS04 K ? GO:0005267 ... P97438 32059793
    491 6w7b:A (3.88) BS01 K ? GO:0005267 ... P97438 33127683
    492 6w7b:A (3.88) BS02 K ? GO:0005267 ... P97438 33127683
    493 6w7b:B (3.88) BS01 K ? GO:0005267 ... P97438 33127683
    494 6w7b:B (3.88) BS02 K ? GO:0005267 ... P97438 33127683
    495 6w7c:A (3.4) BS01 K ? GO:0005267 ... P97438 33127683
    496 6w7c:A (3.4) BS02 K ? GO:0005267 ... P97438 33127683
    497 6w7c:B (3.4) BS01 K ? GO:0005267 ... P97438 33127683
    498 6w7c:B (3.4) BS02 K ? GO:0005267 ... P97438 33127683
    499 6w7d:A (3.5) BS01 K ? GO:0005267 ... P97438 33127683
    500 6w7d:A (3.5) BS02 K ? GO:0005267 ... P97438 33127683
    501 6w7d:B (3.5) BS01 K ? GO:0005267 ... P97438 33127683
    502 6w7d:B (3.5) BS02 K ? GO:0005267 ... P97438 33127683
    503 6w7e:A (3.29) BS01 K ? GO:0005267 ... P97438 33127683
    504 6w7e:A (3.29) BS03 K ? GO:0005267 ... P97438 33127683
    505 6w7e:B (3.29) BS01 K ? GO:0005267 ... P97438 33127683
    506 6w7e:B (3.29) BS02 K ? GO:0005267 ... P97438 33127683
    507 6w82:A (3.6) BS01 K ? GO:0005267 ... P97438 33127683
    508 6w82:A (3.6) BS02 K ? GO:0005267 ... P97438 33127683
    509 6w82:B (3.6) BS01 K ? GO:0005267 ... P97438 33127683
    510 6w82:B (3.6) BS02 K ? GO:0005267 ... P97438 33127683
    511 6w83:A (3.901) BS01 K ? GO:0005267 ... P97438 33127683
    512 6w83:A (3.901) BS02 K ? GO:0005267 ... P97438 33127683
    513 6w83:A (3.901) BS03 K ? GO:0005267 ... P97438 33127683
    514 6w83:A (3.901) BS04 K ? GO:0005267 ... P97438 33127683
    515 6w83:B (3.901) BS01 K ? GO:0005267 ... P97438 33127683
    516 6w83:B (3.901) BS02 K ? GO:0005267 ... P97438 33127683
    517 6w83:B (3.901) BS03 K ? GO:0005267 ... P97438 33127683
    518 6w83:B (3.901) BS04 K ? GO:0005267 ... P97438 33127683
    519 6w84:A (3.7) BS01 K ? GO:0005267 ... P97438 33127683
    520 6w84:A (3.7) BS02 K ? GO:0005267 ... P97438 33127683
    521 6w84:A (3.7) BS03 K ? GO:0005267 ... P97438 33127683
    522 6w84:A (3.7) BS04 K ? GO:0005267 ... P97438 33127683
    523 6w84:B (3.7) BS01 K ? GO:0005267 ... P97438 33127683
    524 6w84:B (3.7) BS02 K ? GO:0005267 ... P97438 33127683
    525 6w84:B (3.7) BS03 K ? GO:0005267 ... P97438 33127683
    526 6w84:B (3.7) BS04 K ? GO:0005267 ... P97438 33127683
    527 6w85:A (3.8) BS01 K ? GO:0005267 ... P97438 33127683
    528 6w85:A (3.8) BS02 K ? GO:0005267 ... P97438 33127683
    529 6w85:A (3.8) BS04 K ? GO:0005267 ... P97438 33127683
    530 6w85:A (3.8) BS05 K ? GO:0005267 ... P97438 33127683
    531 6w85:B (3.8) BS01 K ? GO:0005267 ... P97438 33127683
    532 6w85:B (3.8) BS02 K ? GO:0005267 ... P97438 33127683
    533 6w85:B (3.8) BS03 K ? GO:0005267 ... P97438 33127683
    534 6w85:B (3.8) BS04 K ? GO:0005267 ... P97438 33127683
    535 6w86:A (3.299) BS01 K ? GO:0005267 ... P97438 33127683
    536 6w86:A (3.299) BS02 K ? GO:0005267 ... P97438 33127683
    537 6w86:A (3.299) BS04 K ? GO:0005267 ... P97438 33127683
    538 6w86:A (3.299) BS05 K ? GO:0005267 ... P97438 33127683
    539 6w86:B (3.299) BS01 K ? GO:0005267 ... P97438 33127683
    540 6w86:B (3.299) BS02 K ? GO:0005267 ... P97438 33127683
    541 6w86:B (3.299) BS03 K ? GO:0005267 ... P97438 33127683
    542 6w86:B (3.299) BS04 K ? GO:0005267 ... P97438 33127683
    543 6w87:A (3.2) BS01 K ? GO:0005267 ... P97438 33127683
    544 6w87:A (3.2) BS02 K ? GO:0005267 ... P97438 33127683
    545 6w87:A (3.2) BS04 K ? GO:0005267 ... P97438 33127683
    546 6w87:A (3.2) BS05 K ? GO:0005267 ... P97438 33127683
    547 6w87:B (3.2) BS01 K ? GO:0005267 ... P97438 33127683
    548 6w87:B (3.2) BS02 K ? GO:0005267 ... P97438 33127683
    549 6w87:B (3.2) BS03 K ? GO:0005267 ... P97438 33127683
    550 6w87:B (3.2) BS04 K ? GO:0005267 ... P97438 33127683
    551 6w88:A (3.2) BS02 K ? GO:0005267 ... P97438 33127683
    552 6w88:A (3.2) BS03 K ? GO:0005267 ... P97438 33127683
    553 6w88:A (3.2) BS04 K ? GO:0005267 ... P97438 33127683
    554 6w88:A (3.2) BS05 K ? GO:0005267 ... P97438 33127683
    555 6w88:B (3.2) BS01 K ? GO:0005267 ... P97438 33127683
    556 6w88:B (3.2) BS02 K ? GO:0005267 ... P97438 33127683
    557 6w88:B (3.2) BS03 K ? GO:0005267 ... P97438 33127683
    558 6w88:B (3.2) BS05 K ? GO:0005267 ... P97438 33127683
    559 6w8a:A (3.002) BS01 K ? GO:0005267 ... P97438 33127683
    560 6w8a:A (3.002) BS02 K ? GO:0005267 ... P97438 33127683
    561 6w8a:A (3.002) BS05 K ? GO:0005267 ... P97438 33127683
    562 6w8a:A (3.002) BS06 K ? GO:0005267 ... P97438 33127683
    563 6w8a:B (3.002) BS01 K ? GO:0005267 ... P97438 33127683
    564 6w8a:B (3.002) BS02 K ? GO:0005267 ... P97438 33127683
    565 6w8a:B (3.002) BS03 K ? GO:0005267 ... P97438 33127683
    566 6w8a:B (3.002) BS04 K ? GO:0005267 ... P97438 33127683
    567 6w8c:A (2.6) BS01 K ? GO:0005267 ... P97438 33127683
    568 6w8c:A (2.6) BS02 K ? GO:0005267 ... P97438 33127683
    569 6w8c:A (2.6) BS03 K ? GO:0005267 ... P97438 33127683
    570 6w8c:A (2.6) BS06 K ? GO:0005267 ... P97438 33127683
    571 6w8c:B (2.6) BS01 K ? GO:0005267 ... P97438 33127683
    572 6w8c:B (2.6) BS02 K ? GO:0005267 ... P97438 33127683
    573 6w8c:B (2.6) BS03 K ? GO:0005267 ... P97438 33127683
    574 6w8c:B (2.6) BS04 K ? GO:0005267 ... P97438 33127683
    575 6w8c:B (2.6) BS05 K ? GO:0005267 ... P97438 33127683
    576 6w8f:A (3.4) BS01 K ? GO:0005267 ... P97438 33127683
    577 6w8f:A (3.4) BS04 K ? GO:0005267 ... P97438 33127683
    578 6w8f:A (3.4) BS05 K ? GO:0005267 ... P97438 33127683
    579 6w8f:A (3.4) BS06 K ? GO:0005267 ... P97438 33127683
    580 6w8f:B (3.4) BS01 K ? GO:0005267 ... P97438 33127683
    581 6w8f:B (3.4) BS02 K ? GO:0005267 ... P97438 33127683
    582 6w8f:B (3.4) BS03 K ? GO:0005267 ... P97438 33127683
    583 6w8f:B (3.4) BS04 K ? GO:0005267 ... P97438 33127683
    584 6x90:B (2.26) BS01 K ? GO:0005085 ... P11655 33831355
    585 6yeh:A (2.59) BS01 K 1.4.1.3 GO:0004352 ... Q43314 32655590
    586 6yeh:B (2.59) BS01 K 1.4.1.3 GO:0004352 ... Q43314 32655590
    587 6yeh:C (2.59) BS01 K 1.4.1.3 GO:0004352 ... Q43314 32655590
    588 6yeh:D (2.59) BS01 K 1.4.1.3 GO:0004352 ... Q43314 32655590
    589 6yeh:E (2.59) BS01 K 1.4.1.3 GO:0004352 ... Q43314 32655590
    590 6yeh:F (2.59) BS01 K 1.4.1.3 GO:0004352 ... Q43314 32655590
    591 6yei:A (2.02) BS02 K 1.4.1.3 GO:0004352 ... Q43314 32655590
    592 6yei:B (2.02) BS01 K 1.4.1.3 GO:0004352 ... Q43314 32655590
    593 6yei:C (2.02) BS02 K 1.4.1.3 GO:0004352 ... Q43314 32655590
    594 6yei:D (2.02) BS02 K 1.4.1.3 GO:0004352 ... Q43314 32655590
    595 6yei:E (2.02) BS02 K 1.4.1.3 GO:0004352 ... Q43314 32655590
    596 6yei:F (2.02) BS01 K 1.4.1.3 GO:0004352 ... Q43314 32655590
    597 7bh1:A (3.38) BS01 K ? GO:0005515 ... P03959 34272288
    598 7bh2:A (3.0) BS02 K ? GO:0005515 ... P03959 34272288
    599 7bh2:A (3.0) BS03 K ? GO:0005515 ... P03959 34272288
    600 7c75:A (2.7) BS03 K 1.11.1.7 GO:0004601 ... L8ICE9 33427997
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218