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BioLiP
Download all results in tab-seperated text for 30 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 2i22:B (2.8) BS01 I22 5.3.1.28 GO:0005737 ... P63224 18056714
    2 2i22:C (2.8) BS01 I22 5.3.1.28 GO:0005737 ... P63224 18056714
    3 3s1x:A (1.65) BS01 I22 2.2.1.2 GO:0004801 ... Q9HKI3 21857661
    4 3s1x:B (1.65) BS01 I22 2.2.1.2 GO:0004801 ... Q9HKI3 21857661
    5 3s1x:C (1.65) BS01 I22 2.2.1.2 GO:0004801 ... Q9HKI3 21857661
    6 3s1x:D (1.65) BS01 I22 2.2.1.2 GO:0004801 ... Q9HKI3 21857661
    7 3s1x:E (1.65) BS01 I22 2.2.1.2 GO:0004801 ... Q9HKI3 21857661
    8 3tkf:A (1.5) BS01 I22 2.2.1.2 GO:0004801 ... Q5NFX0 24531488
    9 3tkf:B (1.5) BS01 I22 2.2.1.2 GO:0004801 ... Q5NFX0 24531488
    10 3tno:A (1.65) BS01 I22 2.2.1.2 GO:0004801 ... Q5NFX0 24531488
    11 3tno:B (1.65) BS01 I22 2.2.1.2 GO:0004801 ... Q5NFX0 24531488
    12 5hje:A (1.4) BS03 I22 2.2.1.1 GO:0003824 ... P34736 27578891
    13 5ltz:A (1.67) BS02 I22 5.3.1.28 GO:0005737 ... Q93UJ2 29184087
    14 5ltz:A (1.67) BS03 I22 5.3.1.28 GO:0005737 ... Q93UJ2 29184087
    15 5ltz:B (1.67) BS01 I22 5.3.1.28 GO:0005737 ... Q93UJ2 29184087
    16 5ltz:B (1.67) BS03 I22 5.3.1.28 GO:0005737 ... Q93UJ2 29184087
    17 5ltz:C (1.67) BS01 I22 5.3.1.28 GO:0005737 ... Q93UJ2 29184087
    18 5ltz:C (1.67) BS03 I22 5.3.1.28 GO:0005737 ... Q93UJ2 29184087
    19 5ltz:D (1.67) BS01 I22 5.3.1.28 GO:0005737 ... Q93UJ2 29184087
    20 5ltz:D (1.67) BS03 I22 5.3.1.28 GO:0005737 ... Q93UJ2 29184087
    21 5ltz:D (1.67) BS04 I22 5.3.1.28 GO:0005737 ... Q93UJ2 29184087
    22 5lu6:A (1.67) BS01 I22 5.3.1.28 GO:0005737 ... Q93UJ2 29184087
    23 5lu6:A (1.67) BS02 I22 5.3.1.28 GO:0005737 ... Q93UJ2 29184087
    24 5lu6:A (1.67) BS03 I22 5.3.1.28 GO:0005737 ... Q93UJ2 29184087
    25 5lu6:B (1.67) BS01 I22 5.3.1.28 GO:0005737 ... Q93UJ2 29184087
    26 5lu6:B (1.67) BS02 I22 5.3.1.28 GO:0005737 ... Q93UJ2 29184087
    27 5lu6:C (1.67) BS01 I22 5.3.1.28 GO:0005737 ... Q93UJ2 29184087
    28 5lu6:C (1.67) BS02 I22 5.3.1.28 GO:0005737 ... Q93UJ2 29184087
    29 5lu6:D (1.67) BS01 I22 5.3.1.28 GO:0005737 ... Q93UJ2 29184087
    30 5lu6:D (1.67) BS02 I22 5.3.1.28 GO:0005737 ... Q93UJ2 29184087
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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