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BioLiP
Download all results in tab-seperated text for 109 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 4tso:A (2.3) BS01 HXG ? GO:0005576 ... B9W5G6 25716479
    2 4tso:A (2.3) BS02 HXG ? GO:0005576 ... B9W5G6 25716479
    3 4tso:A (2.3) BS03 HXG ? GO:0005576 ... B9W5G6 25716479
    4 4tso:B (2.3) BS01 HXG ? GO:0005576 ... B9W5G6 25716479
    5 4tso:B (2.3) BS02 HXG ? GO:0005576 ... B9W5G6 25716479
    6 4tsp:A (2.15) BS01 HXG ? GO:0005576 ... B9W5G6 25716479
    7 4tsp:A (2.15) BS02 HXG ? GO:0005576 ... B9W5G6 25716479
    8 4tsp:B (2.15) BS01 HXG ? GO:0005576 ... B9W5G6 25716479
    9 4tsp:B (2.15) BS02 HXG ? GO:0005576 ... B9W5G6 25716479
    10 4tsq:A (1.6) BS01 HXG ? GO:0005576 ... B9W5G6 25716479
    11 4tsq:A (1.6) BS02 HXG ? GO:0005576 ... B9W5G6 25716479
    12 4tsq:A (1.6) BS03 HXG ? GO:0005576 ... B9W5G6 25716479
    13 4tsq:A (1.6) BS04 HXG ? GO:0005576 ... B9W5G6 25716479
    14 4tsq:A (1.6) BS05 HXG ? GO:0005576 ... B9W5G6 25716479
    15 4tsq:B (1.6) BS01 HXG ? GO:0005576 ... B9W5G6 25716479
    16 4tsq:B (1.6) BS02 HXG ? GO:0005576 ... B9W5G6 25716479
    17 4tsq:B (1.6) BS03 HXG ? GO:0005576 ... B9W5G6 25716479
    18 4tsq:B (1.6) BS04 HXG ? GO:0005576 ... B9W5G6 25716479
    19 4tsq:C (1.6) BS01 HXG ? GO:0005576 ... B9W5G6 25716479
    20 4tsq:C (1.6) BS02 HXG ? GO:0005576 ... B9W5G6 25716479
    21 4tsq:D (1.6) BS01 HXG ? GO:0005576 ... B9W5G6 25716479
    22 4tsq:D (1.6) BS02 HXG ? GO:0005576 ... B9W5G6 25716479
    23 4tsq:E (1.6) BS01 HXG ? GO:0005576 ... B9W5G6 25716479
    24 4tsq:E (1.6) BS02 HXG ? GO:0005576 ... B9W5G6 25716479
    25 4tsq:E (1.6) BS03 HXG ? GO:0005576 ... B9W5G6 25716479
    26 4tsq:F (1.6) BS01 HXG ? GO:0005576 ... B9W5G6 25716479
    27 6iej:A (2.206) BS04 HXG 3.1.1.4
    3.1.1.5    		 GO:0005509 ... P49147 31050338
    28 6iej:B (2.206) BS05 HXG 3.1.1.4
    3.1.1.5    		 GO:0005509 ... P49147 31050338
    29 6iej:C (2.206) BS05 HXG 3.1.1.4
    3.1.1.5    		 GO:0005509 ... P49147 31050338
    30 7s4h:C (2.14) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    31 7s4h:C (2.14) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    32 7s4h:G (2.14) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    33 7s4h:G (2.14) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    34 7s4h:K (2.14) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    35 7s4h:K (2.14) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    36 7s4i:C (2.26) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    37 7s4i:C (2.26) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    38 7s4i:G (2.26) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    39 7s4i:G (2.26) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    40 7s4i:K (2.26) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    41 7s4i:K (2.26) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    42 7s4j:C (2.16) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    43 7s4j:C (2.16) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    44 7s4j:G (2.16) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    45 7s4j:G (2.16) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    46 7s4j:K (2.16) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    47 7s4j:K (2.16) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    48 7s4k:C (2.36) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    49 7s4k:C (2.36) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    50 7s4k:G (2.36) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    51 7s4k:G (2.36) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    52 7s4k:K (2.36) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    53 7s4k:K (2.36) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    54 7s4l:B (2.46) BS01 HXG 1.14.13.25 GO:0004497 ... G4SZ63 35298269
    55 7s4l:B (2.46) BS02 HXG 1.14.13.25 GO:0004497 ... G4SZ63 35298269
    56 7s4l:C (2.46) BS02 HXG 1.14.13.25 GO:0004497 ... G4SZ62 35298269
    57 7s4l:D (2.46) BS01 HXG 1.14.13.25 N/A G4SZ64 35298269
    58 7s4l:E (2.46) BS01 HXG 1.14.13.25 N/A G4SZ64 35298269
    59 7s4l:F (2.46) BS02 HXG 1.14.13.25 GO:0004497 ... G4SZ63 35298269
    60 7s4l:F (2.46) BS03 HXG 1.14.13.25 GO:0004497 ... G4SZ63 35298269
    61 7s4l:G (2.46) BS01 HXG 1.14.13.25 GO:0004497 ... G4SZ63 35298269
    62 7s4l:G (2.46) BS03 HXG 1.14.13.25 GO:0004497 ... G4SZ63 35298269
    63 7s4l:G (2.46) BS04 HXG 1.14.13.25 GO:0004497 ... G4SZ63 35298269
    64 7s4l:H (2.46) BS02 HXG 1.14.13.25 GO:0004497 ... G4SZ62 35298269
    65 7s4l:I (2.46) BS02 HXG 1.14.13.25 GO:0004497 ... G4SZ62 35298269
    66 7s4m:B (2.42) BS01 HXG ? GO:0004497 ... C0LJI4 35298269
    67 7s4m:B (2.42) BS02 HXG ? GO:0004497 ... C0LJI4 35298269
    68 7s4m:B (2.42) BS03 HXG ? GO:0004497 ... C0LJI4 35298269
    69 7s4m:C (2.42) BS02 HXG N/A N/A N/A 35298269
    70 7s4m:C (2.42) BS03 HXG N/A N/A N/A 35298269
    71 7s4m:F (2.42) BS01 HXG ? GO:0004497 ... C0LJI4 35298269
    72 7s4m:F (2.42) BS02 HXG ? GO:0004497 ... C0LJI4 35298269
    73 7s4m:G (2.42) BS03 HXG N/A N/A N/A 35298269
    74 7s4m:G (2.42) BS04 HXG N/A N/A N/A 35298269
    75 7s4m:J (2.42) BS01 HXG ? GO:0004497 ... C0LJI4 35298269
    76 7s4m:J (2.42) BS02 HXG ? GO:0004497 ... C0LJI4 35298269
    77 7s4m:J (2.42) BS03 HXG ? GO:0004497 ... C0LJI4 35298269
    78 7s4m:K (2.42) BS03 HXG N/A N/A N/A 35298269
    79 7s4m:K (2.42) BS04 HXG N/A N/A N/A 35298269
    80 7t4p:B (3.62) BS01 HXG 1.14.18.3 GO:0004497 ... Q607G3 35298269
    81 7t4p:C (3.62) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    82 7t4p:F (3.62) BS01 HXG 1.14.18.3 GO:0004497 ... Q607G3 35298269
    83 7t4p:G (3.62) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    84 7t4p:J (3.62) BS01 HXG 1.14.18.3 GO:0004497 ... Q607G3 35298269
    85 7t4p:K (3.62) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 35298269
    86 8oyi:C (2.19) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    87 8oyi:C (2.19) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    88 8oyi:G (2.19) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    89 8oyi:G (2.19) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    90 8oyi:K (2.19) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    91 8oyi:K (2.19) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    92 8sqw:C (2.16) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    93 8sqw:C (2.16) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    94 8sqw:G (2.16) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    95 8sqw:G (2.16) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    96 8sqw:K (2.16) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    97 8sqw:K (2.16) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    98 8sr1:C (2.18) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    99 8sr1:C (2.18) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    100 8sr1:G (2.18) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    101 8sr1:G (2.18) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    102 8sr1:K (2.18) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    103 8sr1:K (2.18) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    104 8sr2:C (2.36) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 N/A
    105 8sr2:C (2.36) BS04 HXG 1.14.13.25 GO:0004497 ... Q603F1 N/A
    106 8sr2:G (2.36) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 N/A
    107 8sr2:G (2.36) BS04 HXG 1.14.13.25 GO:0004497 ... Q603F1 N/A
    108 8sr2:K (2.36) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 N/A
    109 8sr2:K (2.36) BS04 HXG 1.14.13.25 GO:0004497 ... Q603F1 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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