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BioLiP
Download all results in tab-seperated text for 14664 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    12401 7p46:B (1.7) BS01 HEM 1.13.11.11 GO:0004833 ... Q8PDA8 34571402
    12402 7p46:C (1.7) BS02 HEM 1.13.11.11 GO:0004833 ... Q8PDA8 34571402
    12403 7p46:D (1.7) BS02 HEM 1.13.11.11 GO:0004833 ... Q8PDA8 34571402
    12404 7p46:E (1.7) BS01 HEM 1.13.11.11 GO:0004833 ... Q8PDA8 34571402
    12405 7p46:F (1.7) BS01 HEM 1.13.11.11 GO:0004833 ... Q8PDA8 34571402
    12406 7p46:G (1.7) BS03 HEM 1.13.11.11 GO:0004833 ... Q8PDA8 34571402
    12407 7p46:H (1.7) BS02 HEM 1.13.11.11 GO:0004833 ... Q8PDA8 34571402
    12408 7p5t:A (1.3) BS01 HEM 1.14.15.28 GO:0004497 ... P9WPL5 N/A
    12409 7p6l:A (2.33) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... G2QDZ3 N/A
    12410 7p6l:B (2.33) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... G2QDZ3 N/A
    12411 7p6l:C (2.33) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... G2QDZ3 N/A
    12412 7p6l:D (2.33) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... G2QDZ3 N/A
    12413 7p8w:A (2.2) BS02 HEM 1.11.1.6 GO:0000302 ... P04040 35275189
    12414 7p8w:B (2.2) BS02 HEM 1.11.1.6 GO:0000302 ... P04040 35275189
    12415 7p8w:C (2.2) BS02 HEM 1.11.1.6 GO:0000302 ... P04040 35275189
    12416 7p8w:D (2.2) BS02 HEM 1.11.1.6 GO:0000302 ... P04040 35275189
    12417 7pcf:B (5.82) BS01 HEM ? GO:0004601 ... P68871 35357971
    12418 7pcf:F (5.82) BS01 HEM ? N/A Q8NX66 35357971
    12419 7pch:A (2.89) BS01 HEM ? GO:0004601 ... P69905 35357971
    12420 7pch:B (2.89) BS01 HEM ? GO:0004601 ... P68871 35357971
    12421 7pch:C (2.89) BS01 HEM ? GO:0004601 ... P69905 35357971
    12422 7pch:D (2.89) BS01 HEM ? GO:0004601 ... P68871 35357971
    12423 7pch:E (2.89) BS01 HEM ? N/A Q8NX66 35357971
    12424 7pch:F (2.89) BS01 HEM ? N/A Q8NX66 35357971
    12425 7pcq:A (3.62) BS01 HEM ? GO:0004601 ... P69905 35357971
    12426 7pcq:B (3.62) BS01 HEM ? GO:0004601 ... P68871 35357971
    12427 7pcq:C (3.62) BS01 HEM ? GO:0004601 ... P69905 35357971
    12428 7pcq:D (3.62) BS01 HEM ? GO:0004601 ... P68871 35357971
    12429 7pi0:E (2.43) BS02 HEM ? GO:0005506 ... D0FY01 36799903
    12430 7pi0:F (2.43) BS01 HEM ? GO:0009523 ... D0FY18 36799903
    12431 7pi0:e (2.43) BS02 HEM ? GO:0005506 ... D0FY01 36799903
    12432 7pi0:f (2.43) BS01 HEM ? GO:0009523 ... D0FY18 36799903
    12433 7pi5:E (2.78) BS02 HEM ? GO:0005506 ... D0FY01 36799903
    12434 7pi5:F (2.78) BS01 HEM ? GO:0009523 ... A0A1C8XRP4 36799903
    12435 7pi5:e (2.78) BS02 HEM ? GO:0005506 ... D0FY01 36799903
    12436 7pi5:f (2.78) BS01 HEM ? GO:0009523 ... A0A1C8XRP4 36799903
    12437 7pin:E (3.6) BS02 HEM ? GO:0005506 ... D0FY01 36799903
    12438 7pin:E1 (3.6) BS02 HEM ? GO:0005506 ... D0FY01 36799903
    12439 7pin:F (3.6) BS01 HEM ? GO:0009523 ... A0A1C8XRP4 36799903
    12440 7pin:F1 (3.6) BS01 HEM ? GO:0009523 ... A0A1C8XRP4 36799903
    12441 7pin:e (3.6) BS02 HEM ? GO:0005506 ... D0FY01 36799903
    12442 7pin:e1 (3.6) BS02 HEM ? GO:0005506 ... D0FY01 36799903
    12443 7pin:f (3.6) BS01 HEM ? GO:0009523 ... A0A1C8XRP4 36799903
    12444 7pin:f1 (3.6) BS01 HEM ? GO:0009523 ... A0A1C8XRP4 36799903
    12445 7piw:E (4.0) BS02 HEM ? GO:0005506 ... D0FY01 36799903
    12446 7piw:E1 (4.0) BS02 HEM ? GO:0005506 ... D0FY01 36799903
    12447 7piw:F (4.0) BS01 HEM ? GO:0009523 ... D0FY18 36799903
    12448 7piw:F1 (4.0) BS01 HEM ? GO:0009523 ... D0FY18 36799903
    12449 7piw:e (4.0) BS02 HEM ? GO:0005506 ... D0FY01 36799903
    12450 7piw:e1 (4.0) BS02 HEM ? GO:0005506 ... D0FY01 36799903
    12451 7piw:f (4.0) BS01 HEM ? GO:0009523 ... D0FY18 36799903
    12452 7piw:f1 (4.0) BS01 HEM ? GO:0009523 ... D0FY18 36799903
    12453 7pkx:A (2.491) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... P39597 34639208
    12454 7pkx:B (2.491) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... P39597 34639208
    12455 7pl0:A (2.1) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... P39597 34639208
    12456 7pl0:B (2.1) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... P39597 34639208
    12457 7pl0:C (2.1) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... P39597 34639208
    12458 7pl0:D (2.1) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... P39597 34639208
    12459 7pn4:A (2.05) BS01 HEM 1.11.2.1 GO:0004601 ... B9W4V6 36583658
    12460 7pn5:A (1.82) BS01 HEM 1.11.2.1 GO:0004601 ... B9W4V6 36583658
    12461 7pn6:A (1.5) BS02 HEM 1.11.2.1 GO:0004601 ... B9W4V6 36583658
    12462 7pn7:A (1.65) BS01 HEM 1.11.2.1 GO:0004601 ... B9W4V6 36583658
    12463 7pn8:A (1.5) BS01 HEM 1.11.2.1 GO:0004601 ... B9W4V6 36583658
    12464 7pn9:A (1.85) BS01 HEM 1.11.2.1 GO:0004601 ... B9W4V6 36583658
    12465 7pna:A (1.9) BS01 HEM 1.11.2.1 GO:0004601 ... B9W4V6 36583658
    12466 7pnk:E (3.61) BS02 HEM ? GO:0005506 ... D0FY01 36799903
    12467 7pnk:F (3.61) BS01 HEM ? GO:0009523 ... A0A1C8XRP4 36799903
    12468 7pnk:e (3.61) BS02 HEM ? GO:0005506 ... D0FY01 36799903
    12469 7pnk:f (3.61) BS01 HEM ? GO:0009523 ... A0A1C8XRP4 36799903
    12470 7pq1:A (2.46) BS01 HEM 1.14.-.- GO:0004497 ... A0A380DQV1 N/A
    12471 7prc:C (2.65) BS01 HEM ? GO:0005506 ... P07173 10024457
    12472 7prc:C (2.65) BS02 HEM ? GO:0005506 ... P07173 10024457
    12473 7prc:C (2.65) BS03 HEM ? GO:0005506 ... P07173 10024457
    12474 7prc:C (2.65) BS04 HEM ? GO:0005506 ... P07173 10024457
    12475 7q1u:A (2.7) BS02 HEM 2.3.1.- GO:0000139 ... Q5VTY9 34890564
    12476 7q21:B (2.9) BS02 HEM 7.1.1.8 GO:0005886 ... Q79VE9 34910901
    12477 7q21:B (2.9) BS03 HEM 7.1.1.8 GO:0005886 ... Q79VE9 34910901
    12478 7q21:b (2.9) BS04 HEM 7.1.1.8 GO:0005886 ... Q79VE9 34910901
    12479 7q21:b (2.9) BS05 HEM 7.1.1.8 GO:0005886 ... Q79VE9 34910901
    12480 7q6r:A (2.44) BS01 HEM ? GO:0004497 ... Q59819 35053203
    12481 7q6r:B (2.44) BS01 HEM ? GO:0004497 ... Q59819 35053203
    12482 7q6r:C (2.44) BS01 HEM ? GO:0004497 ... Q59819 35053203
    12483 7q6r:D (2.44) BS01 HEM ? GO:0004497 ... Q59819 35053203
    12484 7q6r:E (2.44) BS01 HEM ? GO:0004497 ... Q59819 35053203
    12485 7q6r:F (2.44) BS01 HEM ? GO:0004497 ... Q59819 35053203
    12486 7q6x:A (2.7) BS01 HEM ? GO:0004497 ... Q59819 35053203
    12487 7q6x:B (2.7) BS01 HEM ? GO:0004497 ... Q59819 35053203
    12488 7q6x:C (2.7) BS01 HEM ? GO:0004497 ... Q59819 35053203
    12489 7q6x:D (2.7) BS01 HEM ? GO:0004497 ... Q59819 35053203
    12490 7q6x:E (2.7) BS01 HEM ? GO:0004497 ... Q59819 35053203
    12491 7q6x:F (2.7) BS01 HEM ? GO:0004497 ... Q59819 35053203
    12492 7q6z:A (3.59) BS02 HEM 2.3.1.- GO:0000139 ... Q5VTY9 34890564
    12493 7q89:A (2.08) BS01 HEM ? GO:0004497 ... Q59819 35053203
    12494 7q89:B (2.08) BS01 HEM ? GO:0004497 ... Q59819 35053203
    12495 7q89:C (2.08) BS01 HEM ? GO:0004497 ... Q59819 35053203
    12496 7q89:D (2.08) BS01 HEM ? GO:0004497 ... Q59819 35053203
    12497 7q89:E (2.08) BS01 HEM ? GO:0004497 ... Q59819 35053203
    12498 7q89:F (2.08) BS01 HEM ? GO:0004497 ... Q59819 35053203
    12499 7q9e:A (1.7) BS01 HEM 1.14.14.- GO:0004497 ... D5DF35 36151590
    12500 7q9e:B (1.7) BS01 HEM 1.14.14.- GO:0004497 ... D5DF35 36151590
    12501 7q9e:C (1.7) BS01 HEM 1.14.14.- GO:0004497 ... D5DF35 36151590
    12502 7q9e:D (1.7) BS01 HEM 1.14.14.- GO:0004497 ... D5DF35 36151590
    12503 7qan:AAA (2.01) BS01 HEM ? GO:0004497 ... F4F6Q5 36314667
    12504 7qan:BBB (2.01) BS01 HEM ? GO:0004497 ... F4F6Q5 36314667
    12505 7qgt:A (2.691) BS01 HEM 4.2.1.22 GO:0001958 ... P35520 35864237
    12506 7qgt:B (2.691) BS01 HEM 4.2.1.22 GO:0001958 ... P35520 35864237
    12507 7qhm:B (2.8) BS03 HEM 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    12508 7qhm:B (2.8) BS04 HEM 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    12509 7qhm:O (2.8) BS04 HEM 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    12510 7qhm:O (2.8) BS05 HEM 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    12511 7qho:B (3.1) BS03 HEM 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    12512 7qho:B (3.1) BS04 HEM 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    12513 7qho:O (3.1) BS05 HEM 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    12514 7qho:O (3.1) BS06 HEM 7.1.1.8 GO:0005886 ... Q79VE9 35087070
    12515 7qjl:A (1.38) BS01 HEM 1.14.15.28 GO:0004497 ... P9WPL5 36912255
    12516 7qke:A (2.3) BS02 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    12517 7qnn:A (2.47) BS01 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    12518 7qq7:A (1.6) BS01 HEM 1.14.15.28 GO:0004497 ... P9WPL5 N/A
    12519 7qrm:A (2.7) BS01 HEM ? GO:0009055 ... P00165 36638176
    12520 7qrm:A (2.7) BS02 HEM ? GO:0009055 ... P00165 36638176
    12521 7qrm:I (2.7) BS02 HEM ? GO:0009055 ... P00165 36638176
    12522 7qrm:I (2.7) BS03 HEM ? GO:0009055 ... P00165 36638176
    12523 7qu4:A (1.66) BS01 HEM ? GO:0004601 ... P69905 37006610
    12524 7qu4:B (1.66) BS01 HEM ? GO:0004601 ... P69905 37006610
    12525 7qu4:G (1.66) BS01 HEM ? GO:0004601 ... P69892 37006610
    12526 7qu4:H (1.66) BS01 HEM ? GO:0004601 ... P69892 37006610
    12527 7qwn:A (1.93) BS02 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    12528 7qwn:B (1.93) BS02 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    12529 7qwn:C (1.93) BS02 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    12530 7qyq:A (2.599) BS01 HEM ? GO:0004601 ... Q88HV5 35950185
    12531 7qyq:B (2.599) BS01 HEM ? GO:0004601 ... Q88HV5 35950185
    12532 7qyq:C (2.599) BS01 HEM ? GO:0004601 ... Q88HV5 35950185
    12533 7qyq:D (2.599) BS01 HEM ? GO:0004601 ... Q88HV5 35950185
    12534 7qyz:A (2.452) BS01 HEM ? GO:0004601 ... Q88HV5 35950185
    12535 7qza:A (2.698) BS01 HEM ? GO:0004601 ... Q88HV5 35950185
    12536 7qza:B (2.698) BS01 HEM ? GO:0004601 ... Q88HV5 35950185
    12537 7qza:C (2.698) BS01 HEM ? GO:0004601 ... Q88HV5 35950185
    12538 7qza:D (2.698) BS01 HEM ? GO:0004601 ... Q88HV5 35950185
    12539 7qza:E (2.698) BS01 HEM ? GO:0004601 ... Q88HV5 35950185
    12540 7qza:F (2.698) BS01 HEM ? GO:0004601 ... Q88HV5 35950185
    12541 7qza:G (2.698) BS01 HEM ? GO:0004601 ... Q88HV5 35950185
    12542 7qza:H (2.698) BS01 HEM ? GO:0004601 ... Q88HV5 35950185
    12543 7qze:A (1.9) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12544 7qze:B (1.9) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12545 7qze:C (1.9) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12546 7qze:D (1.9) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12547 7qze:E (1.9) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12548 7qze:F (1.9) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12549 7qzf:A (2.2) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12550 7qzf:B (2.2) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12551 7qzf:C (2.2) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12552 7qzf:D (2.2) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12553 7qzf:E (2.2) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12554 7qzf:F (2.2) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12555 7qzg:A (2.1) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12556 7qzg:B (2.1) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12557 7qzg:C (2.1) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12558 7qzg:D (2.1) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12559 7qzg:E (2.1) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12560 7qzg:F (2.1) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12561 7qzh:A (1.92) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12562 7qzh:B (1.92) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12563 7qzh:C (1.92) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12564 7qzh:D (1.92) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12565 7qzh:E (1.92) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12566 7qzh:F (1.92) BS01 HEM ? GO:0004601 ... A0A7U8UU09 36366763
    12567 7r0w:A (2.8) BS02 HEM ? GO:0009055 ... Q57038 35726684
    12568 7r0w:A (2.8) BS03 HEM ? GO:0009055 ... Q57038 35726684
    12569 7r0w:A (2.8) BS05 HEM ? GO:0009055 ... Q57038 35726684
    12570 7r0w:B (2.8) BS02 HEM ? GO:0008121 ... P27589 35726684
    12571 7r0w:I (2.8) BS02 HEM ? GO:0009055 ... Q57038 35726684
    12572 7r0w:I (2.8) BS03 HEM ? GO:0009055 ... Q57038 35726684
    12573 7r0w:I (2.8) BS04 HEM ? GO:0009055 ... Q57038 35726684
    12574 7r0w:J (2.8) BS02 HEM ? GO:0008121 ... P27589 35726684
    12575 7r1i:A (2.24) BS01 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    12576 7r1i:B (2.24) BS02 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    12577 7r1i:C (2.24) BS01 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    12578 7r3u:A (1.86) BS02 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    12579 7r3u:B (1.86) BS02 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    12580 7r3u:C (1.86) BS02 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    12581 7r3v:C (3.2) BS01 HEM ? GO:0005739 ... P00157 35892964
    12582 7r3v:C (3.2) BS02 HEM ? GO:0005739 ... P00157 35892964
    12583 7r8s:A (1.366) BS01 HEM ? GO:0004497 ... Q2IU02 36268769
    12584 7r8t:A (1.366) BS01 HEM ? GO:0004497 ... Q2IU02 N/A
    12585 7rcv:E (2.01) BS01 HEM ? GO:0005506 ... P09190 34937700
    12586 7rcv:F (2.01) BS01 HEM ? GO:0005506 ... P09191 34937700
    12587 7rcv:V (2.01) BS01 HEM ? GO:0005506 ... Q55013 34937700
    12588 7rcv:e (2.01) BS01 HEM ? GO:0005506 ... P09190 34937700
    12589 7rcv:f (2.01) BS01 HEM ? GO:0005506 ... P09191 34937700
    12590 7rcv:v (2.01) BS01 HEM ? GO:0005506 ... Q55013 34937700
    12591 7red:A (1.53) BS01 HEM ? GO:0046872 ... A0A059ZRB8 34725337
    12592 7reh:A (1.545) BS02 HEM 1.-.-.- GO:0004497 ... Q2IU02 N/A
    12593 7rf1:E (1.89) BS02 HEM ? GO:0005506 ... Q8DIP0 34764256
    12594 7rf1:F (1.89) BS01 HEM ? GO:0005506 ... Q8DIN9 34764256
    12595 7rf1:e (1.89) BS02 HEM ? GO:0005506 ... Q8DIP0 34764256
    12596 7rf1:f (1.89) BS01 HEM ? GO:0005506 ... Q8DIN9 34764256
    12597 7rf2:E (2.08) BS02 HEM ? GO:0005506 ... Q8DIP0 34764256
    12598 7rf2:F (2.08) BS01 HEM ? GO:0005506 ... Q8DIN9 34764256
    12599 7rf2:e (2.08) BS02 HEM ? GO:0005506 ... Q8DIP0 34764256
    12600 7rf2:f (2.08) BS01 HEM ? GO:0005506 ... Q8DIN9 34764256

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218